Array 1 1-263 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWIF01000098.1 Streptomyces sp. NRRL B-24085 NRRL_B-24085_contig_98, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1 19 65.5 32 ----------................... CACTCGAAGTACGCCGTGTGCGGGAAGACTCC 52 29 100.0 32 ............................. CTGATGACGCTGGACGCCGACCTCCCGTGGAT 113 29 96.6 32 ..T.......................... AACCGTCGGGTACGTCGAGGGCACTTCGTTCA 174 29 96.6 32 ...........G................. ACCCACCAGGCCGGGAATGTGTTCGAGCCCGC 235 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 91.7 32 GTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : | # Right flank : CTCCTTCGCCCAGCTCGTGGCCGCGCTCCCGCCGTGTGTCGGCGACGGCTGAAAAGTGGACCAGGGGCGGCGCTTGGGTTCTAAGAGAGCATCTGATCTAGGTAGTTAGTGTTCTGGGATGGTTTTGTGACTGGCTTCGTTGGCGGTCGTTGGATGAGGCGTGAGTGCTCGTCGTTCGTACCGCCGTGACGTGTCCGACGCCCGCCGGGCCTTGATCGCACCGGTTTTCGCCGCCTGGCGAGACGGACTGACCCCCCGGAGGGTGAAGCCCGCCCGCTTGCCAGAACCTTCACGGGCTCCGGCACGTCATGCCCGGCATGAGACCGATCTATGACGCGCACGTCGAACAGCCGGGGCTGGCCGTCGTCGAGGTCGTGGCCGCCGACGACGCGACCGCCTTCGCCGTCCAAGACCTGCTCGCCAAGCACTGCGCGATCGCACCGGCCGCGCCAGCGGGACCTTGTCCTGATCCCGCAGCACGACGGTGCGCACCACCGTCT # Questionable array : NO Score: 5.57 # Score Detail : 1:0, 2:3, 3:0, 4:0.59, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.10,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.15 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], // Array 1 2276-52 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWIF01000105.1 Streptomyces sp. NRRL B-24085 NRRL_B-24085_contig_105, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2275 29 96.6 32 .........................C... CAGCGTGCTCTCGAGGGCGTCCCGTTCGGACG 2214 29 96.6 32 .................A........... GCGGGCAAGGCCGTGCCGGTGAGCCAGATCGC 2153 29 100.0 32 ............................. TCGCCGGCGTCCCATCGGAGCAGTCCGATGCA 2092 28 96.6 32 ..............-.............. CAGGCCGTACGCGTCGACACCCAAGGCCTCTA 2032 29 96.6 32 ...................C......... GCGCCCTGCCCGACAGGGCGCCGGCCTGCCCC T [2012] 1970 29 100.0 32 ............................. GTCCAGGATGATGTTCCGGAGGTAGCCGTACG 1909 29 93.1 32 ....GT....................... CCGGGCGAGCCGGAGCCCGGTCGGGTGGTCGG 1848 29 96.6 32 ..................C.......... AAGAAGAGCGGCAGACTGGCCGCTGACGAGTT 1787 29 93.1 32 ......T....G................. GCGGCACCCCCGCCGATGACGATGCCTAATAT 1726 29 93.1 32 .................T..........G AGCAAGGAAGCGGCCCCCCGACCGTCACAGCA 1665 29 100.0 32 ............................. TGGCCGGTGGCCTGGACGACGTCCCGCGTCTT 1604 29 100.0 32 ............................. TACCTGAAGACCACCACCGAAGGTGAGCGGAT C [1589] 1542 29 100.0 32 ............................. GTGATGAGGCCGTCGGCACTGATCTCATCGCT 1481 29 100.0 32 ............................. TCCTGCCACGCGGCGGCGACGCTGTCGCCGAT 1420 28 96.6 32 ......................-...... TACACGCCGTCGATGATCAGTACGGCCTCGTC 1360 29 100.0 32 ............................. GTGCTGGGTGTCGAGCGGCAGATTCAGCATGG 1299 29 93.1 32 ............T..C............. GGGCCGCTGTACGTACGCGGGCGGACACATCA 1238 29 96.6 32 ..............A.............. GTAGACCGCCCCGGAGGTTTTCACCTCCGGGA 1177 29 96.6 32 A............................ TCGGGCTTGAGCTTCTTCGCTTCCTCCTTCAG 1116 29 100.0 32 ............................. GAGTAGGTACACACGGGTTTTCGGGGCCCGCA 1055 29 100.0 32 ............................. AGAGCCAGGTACTAGACCTCTTGGTCGGCCTT 994 29 100.0 32 ............................. ACCCTGCGGGAGATGAGAACCCTAGTCGCGGT 933 29 96.6 32 ...........G................. TTCTGCTGCGACTGGAGCCCCTTGACGATGCC 872 29 96.6 32 .................A........... TGGGTGCCGTACTCGTTGATCGTGTCGAGGAA 811 29 96.6 32 ....................A........ TCGACGATCGAGGGCCGGGAGAACGTCCACCG 750 29 100.0 32 ............................. TCCCCGAGAGCGGCCTCCACGGCATCGTGAAC 689 29 100.0 32 ............................. TGGCCGCCGCCGGCGGGGCGGGCGTTCTCGTG 628 29 100.0 32 ............................. GCGCCCGCGGAGAGCTGGATCGTCTCGACGTC 567 28 96.6 32 ....................-........ TCCGCATCGCCGTCCGCCTCGATGATCCATCC 507 29 93.1 32 ...T..........T.............. TCCGCCTGCGCCGTCTCCTCTTCGGTGAACGG 446 29 96.6 32 ...................A......... CGTCGGCCAGAGAGAGGGGTCAGGGCCTGCAA 385 29 96.6 32 .....T....................... ACCTGATGTCTTTCGGTGAGCTCCGGGGGCGT 324 29 100.0 32 ............................. CCGGCCCCCGACGCGATCAGCGGCGACACCGT 263 29 93.1 32 A.......T.................... AGCGCGAGGACGCCGTCACGGCCGCCGCGCAC 202 29 96.6 32 ...................A......... TCGCCGCAGACCTGGCAGGCGTACTCGGGGTT 141 29 100.0 32 ............................. GGGTCCGCCGCGGTACCGGTGACGGTGACGGT 80 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 37 29 97.5 32 GTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : GCTTCCCCGACGAGGACCCCGCCGGCCTCACCCGGCAGGAGCTACTCGGCCGCGAGGGCCGCCGGGTGAAGGACTGCTACCGCGAGCACTCCGCCCGCACCGGTGTCCCCTGGCGCGGCCACCGTTACACCCCCGGGCGACTTCACCAGCGGGGACGCCGTCAACCAGGCCATCACTGCTCCGCACAGTGCATGTACGGCATCGCCCACGCCGTCGTAGCCTCCCTCGCCTGCACCCCGGCGCTGGGCTTCGTCCACTCCGGGCACACACTGTCCTTTGTCCTCGACATCGCCGATCTGTACAAAACTGAGATTGGCATCCCCCTCGCCTTCGACGTCTCTGCCGACGACGACGAGGACGTTGGCGCCCGTACCCGCCGTGCCCTGCGGGATCGGATCAACCAGACATCCCTACTGGACCGCTGCGTTGACGACATCAAGGCCCTGCTACTGCCGACCACCGCGGATCGCAGCACGGCTGCCGATCCAGACGAACCAGTC # Right flank : CGCGACCGCCCGCTGGAACTCGGAGCTCGACCAGTGCTCCCCGCACCCGCGG # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.62, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [8-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 13458-13244 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWIF01000105.1 Streptomyces sp. NRRL B-24085 NRRL_B-24085_contig_105, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 13457 29 96.6 32 A............................ GTCCCAACGTCCATGACCGTGACCGGCATCGG 13396 29 100.0 32 ............................. CATTCGGGGGGCGGTCCCCCGTTCTCGGTCGG 13335 29 100.0 32 ............................. TGCTGCTCGGTGAGCGGGGTGGTGGTCACGGG CC [13321] 13272 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 99.2 32 GTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CCTCCTGGTCGTACCCCAGTGTGATCGTGTCGTCACAGGGCATCGACCATGTCTGATCGACCTCGCCGCTCAGCGTCAGGACATATGCGGCTTCGCTGGAGCGGCCCACGGCCGGGACCTGAACTCTGGTCAGGGGGGAGACGCCGGAGAGCCTGCTCAGACCTGTGACCTGGAACTCCACCGCGTCGAACGGCAGGTCACCTTCCGGCACCTCCAGGCCGTGTAGACCAAGGCGTCCGCTGATACGCGAATGCCCCGGCAGCAGGTGCGTGACCCTGGCCCCCACCAGGACGACCTCGTGGTTGGTCCGCAGCGTTCCACGCAGCACCGAATGTTCCTCGGTGCTCCCATCGAGAATACGGCGACGGGCGGGTCCACGACGTCAGGCGGCACCGTCCAGGCCGACGGGTCCTCGAAGACCACTCCCCGAGGGGACGCCCCGGCGGCAAGCTCAAGTTCCCCCGCCTGTGTCACACCGCCGAGCTGCCAGGTGCACGGAT # Right flank : GAACGCCATGCCAGTACCCGCAGTCCGTCAGAAGCCAGCTCTCGTCGAGGGTCTCGATGTCCGAGGGCTGGCGAACTCCGCGGAAGAGCTCCGACCGGACGGCACAAAGGCTCCCTTCCTTGAGGCGGCGCCCGCCACCCTCGACCGCTTCGCAGCCCAAGTCCTTGGTCTCTCCCGCAGCAGCCAAGTTCCACGCCCTGGACCGCGTCAGAGTCCCGTACGTCATTCGTGCCAGGTGGTGTCCCTGACCCAGGGCAGTGCGAACCGTTCCAACAACACCAAGGCAAAGTAGAGAAGGATGCTCATCAACCCGATCAGGATGATCGCGGCCCAGGCGGTGGCGGTGTCGCCCACTCCGCCGGCTTGAACGATCAGATAGCCCAGTCCAGCCTCACCGGCCTGGAACTCGCCGATGACCGCACCGATCGCGGCGAGCGGCATGGCCACCTTCAGCCCGACGAAGATCTGTGGCAGCGCGGCGGGAAACCGTACCTTCCGGA # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [2,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.30,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 22248-18204 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWIF01000105.1 Streptomyces sp. NRRL B-24085 NRRL_B-24085_contig_105, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 22247 29 69.0 40 CCA.C..A......T...A..G......T TGAGGCACCAGCTCCCGCACCCGCACCCGCACCCGCACCC 22178 29 79.3 32 .CA.C...............A..CA.... GTCCTTGCCTGTAAGGACGCGAACATCTGGAC ACG [22170] 22114 29 69.0 32 CC..G....A.GT.G...C......C... GCGGAGAACGACTTCACCGCTTCATGAGCGGA 22053 28 89.7 32 C.............-..........C... TTCACCGAAACCCCAGTCGACACCGTCACCGA 21993 29 86.2 32 C..........G......A....A..... ACCTCCAGTGCGGCGGGCTTCTCTTCCAGCGC 21932 29 79.3 30 C..A....T...T.T.A............ GCGTAAAGCCGCTGGTTGACCGCAGGTGGG G [21907] 21872 28 82.8 31 C..........G..A.....-.......T ACGGCGCCGGCCCGCAGAAGGTAGCGGACAT C [21847] 21812 29 82.8 27 CGA........GA................ CTGACCGACGTACCAGATCGAGAAGGC C [21803] 21755 29 96.6 32 ...........G................. CTCGCGGCGGACAGGCTCCCGATTCCGGAACT 21694 28 86.2 32 .G...T.....G............-.... TGCCCGTCTGCGTCCGCATACACCTCTGCGCC 21634 29 86.2 32 .......T...G..T.........A.... CCGGCCATCGACGACCCGCGGTCCTGGTTCGA 21573 29 82.8 31 .........A.G....T...C..C..... ACGGGCGCCCGCCCCCCACCAGGGCGACGAG 21513 29 89.7 27 ...........G..T.............T CAGTTCCAGCTGACCAACGTGGGCAAC 21457 29 82.8 32 .AA..........T........C.C.... CAGCAGCGGCGTAGACGGGAACCGTCCGTCTA TGGT [21448] 21392 29 93.1 32 ..............TA............. GTGACTACCGCTTTTGCACCTTGCTGTGTGAG T [21387] 21330 28 82.8 33 C..........T....-.....C..C... GACGTGCGCTCGGGTACATGTTGGGGGCGCCCC 21269 28 86.2 30 C..........G..G.....-........ ACCTGTGTTTGGAAGAGACCTCCACCCCGT A [21244] 21210 29 96.6 32 ...................C......... GCGGATCCAGGACGGCGTCATCACCACCCAAA 21149 29 100.0 32 ............................. CCAGCGTGTGGGAACGCAGTTCGACTGCCGTC 21088 29 96.6 32 C............................ GGGCCCTCCGGGCTCGTCGCGCACGACCCTCG 21027 29 100.0 38 ............................. GCCCTCAAGACGGCGGGCGGCGGCGTCGGACAGTGCTC 20960 29 93.1 32 CG........................... GTCCCGGTTCCCGCGTTGCAGGTGGCGGTGAG 20899 29 82.8 16 C...................CTC.....G GCTACGCGCACTCACG A [20873] Deletion [20855] 20853 29 96.6 32 .....T....................... ACCCGGGTCGAGGTCTGCCAGTCGTTGCCGAT 20792 29 100.0 32 ............................. GCCTCTCTGACCTCGTCAGACAACTCGATCTT 20731 29 93.1 32 ....................A.C...... GGCTCGGCACCGGCCCTCGTGATGTCCTTGAT 20670 29 96.6 32 ..........T.................. TGCCGGGCTGCCGCCTGGAGACCGTCCCCGAA 20609 29 96.6 32 .....G....................... TGCTGGGGCGCGCGCTTCGGTGCCGCTTCTCG 20548 29 100.0 32 ............................. ACGCCCTGCTTCAGGGCGTCCGTGGTCTGTTC 20487 29 100.0 32 ............................. TGGGCTTTCCGTGACTCGGAATCGGGGCCCTT 20426 29 100.0 32 ............................. ACCGGCAGCCTGCTGGAGCTCTCCAGGCGCCT 20365 29 100.0 32 ............................. CCGCCGAGGTCGGTCGGCTGCGCGGCGTCCGT 20304 29 100.0 32 ............................. CCGCAGACCTTCACGGTGACCCGCTCGGTCAA 20243 29 100.0 32 ............................. CGTCCGCCCTGGCGGCTGAACCAGACAAGCTC 20182 29 100.0 32 ............................. CCGAACCCCGCGCTGTACATCACGCTGAACTA 20121 29 100.0 32 ............................. CCGCAGACCTTCACGGTGACCCGCTCGGTCAA 20060 29 100.0 32 ............................. GACGGCGTCATGGGCGGGACGACCTGGCCGCG 19999 29 96.6 32 ..............T.............. GGCACCGCACCCATCGCCGCCGTCCTCGGCGC 19938 29 96.6 32 .G........................... CTGCCGGCGACCTCATCACCGCCGCAGGTCTC 19877 29 96.6 32 ...................A......... CCTGGAGAGTGCCGAGGTCGATGCCCAGGTGT 19816 29 93.1 32 ...................A....C.... GCATGTCCCGGCTGTGACCGTGACGGCGTGGC 19755 29 100.0 32 ............................. CTGCCTGCCCGGGCGGAGGTGCCGGTGCCCAT 19694 29 89.7 32 ...........GG........G....... AAGTCCGGGCCGTCCGACGCCGCCTCGGCCAC 19633 29 96.6 32 ..................C.......... CCGCCCCACTTCACGAACATCGCGAATTCCCC 19572 29 93.1 32 ...T..........T.............. CCGCACTACATCGGGAGCATCACGCCCAAGCC 19511 29 96.6 32 ..........................T.. ACCGCCTGGCTGAAGGATCCCGGCAATCCGCA 19450 29 96.6 32 .......................A..... GTGCCGGAAGCGGCGGCCTTCTCCTCCTCCAG 19389 29 100.0 32 ............................. ACCGCCTGGCTGAAGGATCCCGGCAATCCGCA 19328 29 96.6 32 .......................A..... GTGCCGGAAGCGGCGGCCTTCTCCTCCTCCAG 19267 29 100.0 32 ............................. TGGATGCTCACTGGTCCCCCTAGAAGGGCGGT 19206 29 100.0 32 ............................. AGCACGAACTCCGGCGGCACAGCAGGCGTCGC 19145 29 100.0 32 ............................. AGCTCGCGAAGGATCGTCCCGGCCCGGACGGT 19084 29 96.6 32 ............................T CCCATGCGGGTTGCGATCGCCGGTATCCCTTG 19023 29 100.0 32 ............................. TACAGGATCCGGCGGCGCAGTGTGGACGCCAA 18962 29 100.0 32 ............................. AGCGCGACGGACATGTTGGGTCCTTATCCGGC 18901 29 96.6 32 ....................A........ CGACAGGTGGAGGACGCGGAACGGGCTCTGGG 18840 29 96.6 32 ....C........................ CCGGCGTCGAGTTGGGCGCCGATCTCGCGTGC 18779 29 100.0 32 ............................. TCCCCGCCGCCGGCGGAAGCGCCGAACTCCCG 18718 29 96.6 32 ...........G................. GAACTCGCCCCACTCCTCGTTCGTGGGGTCGA 18657 29 100.0 32 ............................. GGGCCGTTGTCGTCGCACAGCAGCAGCTCGCC 18596 29 100.0 32 ............................. CCTCAGACGTTGAGTCAGCACGAGACCGGTGA 18535 29 96.6 32 ..................C.......... GGGTCGTCCACCCCGACGAGGTGGTCGAGGTG 18474 27 89.7 32 .........A...--.............. AGTGTGGCGTCGCGGAAGGTGAGCGTGCCGTT 18415 29 100.0 32 ............................. GTGCCGCCGCTCGACTTGCCGAGCTGGTGTGT 18354 29 93.1 31 ........T......T............. ACGTCGCCGATCCGTGTGACGTGGAGCGTGG T [18328] 18293 29 93.1 32 ...................A.......T. TTCGAGTGGACGCGCACGGACATCCCGCACCC 18232 29 93.1 0 ...........................TG | ========== ====== ====== ====== ============================= ======================================== ================== 67 29 93.7 32 GTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : GTCCAAAGTCCCCGGAGACTGGGCAGCCATACCCCGCGGCGTCCTCACCGACAAACCACACGTCATCACCGTCGACCGCACCCTGCGGGCCGGCGACGCCCTCACCTTCCGCACAGTCGTCAACCCCACACACAACCGTCCAACCGGACCGCCAGCCCCAGACCGCCCGCGCGGCAAACGGACCGCTCACACCCGCCCCGACCACGTCAAAAACTGGTTCGTACGCCGCCTGCAACCTCCCGGCCAACCACGCCAAACACCCGACGGCCTCACCCGCATCGGCGCTACCACCGAAGAACAGACCCTCGCCGTCCGGATGCTCCCCACCATCACAAGCCCCGGCCCCCACAAAGGCCTGCGCATAGTCCGCGCGGAAATCCGGGGCACACTCACCGTCACCGACCCCGTCGCCCTCGTCGACGCCATGACCCACGGCATCGGACACGCACGGGCATACAGCTGCGGACTACTCCTCACACGGTAAACACCCGTCAGCGGAA # Right flank : TCGGCGACGCTTGAAATGTGAGCCGATTCCGGCGGGTGAAAAATGACCCCCTGCTGCGTCAGTTGATGTTGGTCATTCCCCGGTGTTGGCGTCGGGAACCCGTCCGAGGTCGCGGCCGCGCATACGATAGCTGTCGCCCTTGAGCGAGATCATCGCGGCGGCGACGGTGTCGTCGCCGAAGACCTCGCCCCAGCGCCCGAAGGGCTTGTTGCTGATCACGATCACCGAGGCGCGTTCGTAGCGGCCCGAGATGAACTGCGAGAACAGGTTCGCGGCCTCGGGCTCGAAGGGGATGTAACCCACTTTGTCGACCACGATCAGCGGGATCCGTCCCAGCCGGGTCAACTCGTCGCTCACACGCCCTGCTTGATGGGCTTCGGCGAGGCGGGTGACCCACTGAGCGGCGATGCCGAAGGCGACCCGGTGACCGGTCTGGCAGGCCCGGATGCCGAGCCCGGTGGCGAGGTGGGTCTTGCCGGTGCCGGGCGGCCCCAGAAAGA # Questionable array : NO Score: 5.37 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:-0.01, 8:1, 9:0.44, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [17-98] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //