Array 1 231981-233352 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMRY01000007.1 Raoultella ornithinolytica HKSH1 contig00007, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 231981 29 96.6 32 ...........................G. CCCTGCTTCGCTGCTGCACACCACAACAGCAT 232042 29 96.6 31 ...........................G. TCAGGAACGCCGCCACGCCGCCGCCGTATCC 232102 29 100.0 32 ............................. CACTCATTTAATACAGTGTTGACAACATGCGC 232163 29 100.0 32 ............................. CCTTTACCCGCCCAGCGCAGCGTCCTTTTTGC 232224 29 100.0 32 ............................. CACCATATCGGCGGTTTATCATGGGGATGGGA 232285 29 100.0 32 ............................. ACGCCGCAATGGTTGAGTCTGTTCGCACCGCC 232346 29 100.0 32 ............................. CAAGACGGGACCTAAAAGCGGATACCGACCGG C [232355] 232408 29 100.0 33 ............................. CCAACAGGGATACTTTTCGTGGTATTGATGCGC 232470 29 100.0 32 ............................. GAAGCTACCGTCGATGTGATCCAGTGCCTGAA 232531 29 100.0 32 ............................. GTGACCGGGCTGCACAGTCTGCGACCAAATCC 232592 29 100.0 32 ............................. CCTTCCGGGGTGAATTCCAGTTCGGCAATGCC 232653 29 96.6 32 .C........................... GGTGAGCCCATATCCGAGAACCGCGGCTGTCT 232714 29 100.0 32 ............................. CAAAAAATGAAACGATCAGAGTCCTCAATACT 232775 29 100.0 32 ............................. CGTTACGGTCCGGGCCAGATCGGGTTGAGGGT 232836 29 100.0 32 ............................. CGCACTCTTCACTTACCAGTTATGGGTGACGG 232897 29 100.0 32 ............................. AAAACGAAATACTGGCCATCGACCAGCTGATC 232958 29 100.0 32 ............................. AGAACATGCTCGCCAAAGAAACTCAGGCCATC 233019 29 100.0 32 ............................. TTATATTCCATCCATTCAGCAGAGCAATACTG 233080 29 100.0 32 ............................. ACATTACGCAAACTTTATTTATATGCTAACGG 233141 29 100.0 32 ............................. GCCAGACCAGCCTCGATGATCTGCTGTGGTTC 233202 29 96.6 32 .............T............... CTGATTGGTTATGCACGGGTGTCCACCGGGGA 233263 29 96.6 32 .............T............... GTCCGTGTGCGCGGAATATTCCCGGATGCGTC 233324 29 93.1 0 A...........T................ | ========== ====== ====== ====== ============================= ================================= ================== 23 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTTATTGAAGAGGTTCTTGCCGCGGGGGAAATCCAACCTCCAGCTCCCCCTGAAGATTCGCAACCCGTTGCGATCCCACTTCCTGTCTCGTTGGGAGACTCTGGCCATCGGAGTAATTGAGGATGAGTATGCTGGTTGTTGTGACTGAAAATGTACCACCGCGACTGCGAGGAAGGCTGGCTGTCTGGCTACTGGAGATTCGTGCTGGGGTGTATGTTGGCGATATTTCGGCCAAGGTCCGCGAGATGATATGGCTACAAATCTCCGTTTTGGCGCAAGAGGGAAATGTCGTGATGGCATGGGCAACGAATACTGAATCAGGATTTGAATTTCAGACTTTCGGTGAAAACCGACGTATTCCGGTAGATCTGGATGGGCTGAGACTGGTGTCATTTTTACCCATTAAAATTCAATAAGTTAGTGTTCTTTAAAAATACGGAAAGTTTGGTAGGATTGAGTGTGTTGAAAAAAGTCTTTTAGTTCAGTTGCATAGCGTTAGA # Right flank : GCAGCGCTGTATTACTGCCTGGTAACGCAGGGATGTGCACCTTCCCCGTAACAGAAAACGCCGGCTAGCCGCGCTTTTCCGCCTTTGCCAGCTCTTTTATCAGCGGCAGCATCACCTTGACGACATCGCGGCTGCGGTGTTCGATACGACCCGGCAGAGCCTTATCAATATGCTGCTGGTTATCCAGCTGTACGTCATGCCAGCTGGTTCCTCGCGGGAAGGAGGCGGATTTGTTGCGCTGTTGATAGCCATCTTTCTTACCCAGAGACCAGTTCGTGGCCTCCACGGACAGGACCGGGATCCCCGCGCTATCAAAAATGCTGGCGTCATTACAGCAGCCGGTACCCTGCGGATAATCATGATTGAGGCCAGGGTTGGTATAGGCGGCAATCCCTTTGCTGCGCGCAATAGCCAGCGCGCGGTCTCGGGTGAGTTTGCGAATCGAGGCGGGAGTGCTGCGCCCGCTATTAAAATAGAGCTTATCGCCAACCACCAGATTA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0.41 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //