Array 1 287247-290517 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDQM01000001.1 Colwellia marinimaniae strain MTCD1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 287247 28 100.0 32 ............................ TTTCAAAGTGAATAAAAAAGTGAATAAGTGAA 287307 28 100.0 32 ............................ AGTAACTTTTAATGATGATTGCGAGCCGTTGT 287367 28 100.0 32 ............................ AAAAGTGTTAAGCGTTAATTGCATTTCCTTTG 287427 28 100.0 32 ............................ TTAGCGCCTACGATTATCGTTAATGTTCTTGG 287487 28 100.0 32 ............................ ATCATCTAAAAAGTTTGTTGTACTAACACCAA 287547 28 100.0 32 ............................ TCTTTCATCTATAGTGTTAAGTGTATCAAACA 287607 28 100.0 32 ............................ TATTAGGTGTAAATCAAAAGTTTAGCATTATG 287667 28 100.0 32 ............................ TGTCATTACTATTATTGGTGTAACATCGTCTA 287727 28 100.0 32 ............................ AATACTCCGTATAGTTAACCTTATCCCCTGCT 287787 28 100.0 32 ............................ AGTAGCGCGCGTTTATTAAGAATTAGTATCGG 287847 28 100.0 32 ............................ GGACGGAAGCGGCGGCACTATAATTGAATATG 287907 28 100.0 32 ............................ TATACCATACTTCGCTAGTAGACAATACATCA 287967 28 100.0 32 ............................ GTTGAAACTGATTTGTATTTTATTACCGCTTT 288027 28 100.0 32 ............................ TTTCAAGGAAAAAAAATCAATAAATGTTTAAC 288087 28 100.0 32 ............................ ATACTTATGCACTCATCAATAATCAATAAACA 288147 28 100.0 32 ............................ TTAATGTCAGTAACCTTTATTGATCCCTCAAA 288207 28 100.0 32 ............................ TAGTCAATCTCCAGTGGATTTATCAAACGGTA 288267 28 100.0 32 ............................ TACCTACGGGCGTTACCATCACTGATGTTTCA 288327 28 100.0 32 ............................ GAGAAAGTACCGCTTGAAGATACCGATCTAAT 288387 28 100.0 32 ............................ GACAACTATGCTTATTCCAGTCGTTTCAGCTT 288447 28 100.0 32 ............................ TGAATCAGTCGAAGACGGCGCATGGTTCAAAA 288507 28 100.0 32 ............................ GCTAATCTATCGGATATCGATCACTCACTTAA 288567 28 100.0 32 ............................ GTAAACAATAAAAGGAAATGAATTATGATTGA 288627 28 100.0 32 ............................ ACAACAACGCAATCACTTTCTATATATGCAAA 288687 28 100.0 32 ............................ AGACCGTACCGTTTGCTGGATTAACCGAAGCT 288747 28 100.0 32 ............................ AGTATGAAGCTAGGCGAGTTGCAATACTTGAA 288807 28 100.0 32 ............................ ATATAACCAGTGTGACCCATTTCACCCCATAA 288867 28 100.0 32 ............................ GTTAGCATCAATGAAAGCGACGACAGTATTTG 288927 28 100.0 32 ............................ GCTTGATTTAAAGTTTGATACAGACACTCGGC 288987 28 100.0 32 ............................ TCAGTATTTAATGTTGCGCGTATACTTCCGTT 289047 28 100.0 32 ............................ GTTCACTGCTAAACAAAAATAAACTTAATATA 289107 28 100.0 32 ............................ ATTCTTGGTTTTGGTGTCGGCAAAATGCTTGG 289167 28 100.0 32 ............................ AGTTAGAGATTGTTTTGTAGAGGAAGGATTTG 289227 28 100.0 32 ............................ TTCACCATCGTCAATCATTCGTGTAGTTGTGT 289287 28 100.0 32 ............................ GATATTCTCGGTAACTATCGTAAAACAATCCG 289347 28 100.0 32 ............................ GTTATGGTTGGCTAACATACCAATACGAACCA 289407 28 100.0 32 ............................ ACAATAGCTATTGCCGGTAAAATAGTTAAAGG 289467 28 100.0 32 ............................ TTATTAACTTGCGTTACACTTTGCACCAGCGC 289527 28 100.0 32 ............................ TATACCATCGGGCGGCGCAACAACTAGTATAA 289587 28 100.0 32 ............................ TTACTATCAAGAAAGGTGATCGTGTGCTGTTT 289647 28 100.0 34 ............................ ACCAGCATTCAAGTCTGCCATGATACCTACAGAT 289709 28 100.0 32 ............................ GTGGTAGTAGATTCAGAGGCAACCGAGGCTAA 289769 28 100.0 32 ............................ ATATAAGAAGAGAACATAAGGCAAAACCTTAA 289829 28 100.0 32 ............................ TCAATTACTAAAGTACGTTCAGAGATGAGAGA 289889 28 100.0 32 ............................ GATGGTTTCTTGAATAGAACCCCATAAGAGCA 289949 28 100.0 32 ............................ TTATATCCCCGTACCATATAGGGACAATGTTG 290009 28 100.0 32 ............................ TCTTGGTCTTATCTAGGTGAGCGCGAAGGACT 290069 28 100.0 32 ............................ TGTGCTATAAGTTAACTGACCTGTACGAATAT 290129 28 100.0 32 ............................ ATAGGTATTGCAACAGTTATAGAAGAGGACGA 290189 28 100.0 32 ............................ TATTAATTCAAATAAAACACAATAAGGTGTTG 290249 28 100.0 32 ............................ ACTATTGAGGCTGTGATGCGTTTATATAAAAT 290309 28 100.0 32 ............................ AAAGAGACTACTTAAAAACGAACTGACTAGTT 290369 28 100.0 32 ............................ TTTGATAAAATCGCTACGCTTAAAAGGGTAAT 290429 28 100.0 32 ............................ GTGTAAAAATGTCTGATGTTGCTGACTTTGGC 290489 28 92.9 0 ....................A...C... | T [290513] ========== ====== ====== ====== ============================ ================================== ================== 55 28 99.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GATGTCTTATCTATCCCTGAAATGGTGCAATACCGAACCATTTCAAGAAAACAAGCCAACATGACCGAAGCAAAATTAAGACGGTTAATTACTCGTAAATCTATCACTAAAGATGAAGTAAAATTGTATAAAGCAAAAATGTTTAGTCAAGGATTAGACAATGCTTATTTGGAATTAGTCAGTAGCTCTACTGGTGAAAAACATCGACGCTATATTCAATTTGGTGAGTTAAAAGATACACCAGTTGCAGGTGACTTTGATTCTTTTGGTTTAAGCAAACAAGCCACAGTCCCTTGGTTTTAAGGGAATATGGTTACTTTTAAAACCCGTTGAATGCAACGGGTTTATTTTTTCGGAAAAATTAACGTTTACCCTAAAAATCAACTCTTTAAAAATATGGTTAAATATTAACAAGTTACGAATCAGCTAAAAATTTAGGTTAAAAAGTCTAAAATCACCTAGCTGTTTGTTGTAACTTGTTTTTTTACTGTTATTCTATT # Right flank : AGACATTCGTGATTGGCGACGGCAGTATTAGCAAATAGAAAAGAAGTTTATCAGCGTGCTAAGGAACGTGAATTGGAGTGTTGGAGGGGGCGATGGACAAACTGGTATGGTAATCCCCCCATTTTTAATGGAGGTCAGCAGTAGACCTTTTAAAGGGAACAAAGTGGTACTGAAATAGTGCTATATCATACTGTTAAAGAGAATTTTTTTGCTTGTACGGATGCAAGTGGCTACCTTATCTGTGCCACATATTTCAGTAAAGTTTAACTGGAGTAATACTATTTGCTAGCATTGTAAAAATGATTGATATTAGCTATCGCCAACAACATTTTATGCTTTGCCGAAGTATTAGCTGAGTGCACAAAAATAAGAGGGGGAATAAAGCCTTGGGTAAAAACAGCTTCCTCTATCCAAAGTAGTACATCATAACCAGTGCCATGCTCATCATCACCTAAGTCATGATCTAAACTTATTTCAGTTACTATATTTTGTTCGAGTAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //