Array 1 129027-130033 **** Predicted by CRISPRDetect 2.4 *** >NZ_AKCB01000003.1 Coprobacillus cateniformis strain D6 cont1.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 129027 33 100.0 35 ................................. TTAGACATGATGTGATAAATAAGAGAACTATTAAC 129095 33 100.0 36 ................................. TTGTTTACGGGTCTTGGTACTCTTGCTATGGGTGCG 129164 33 100.0 36 ................................. CATCTTTTAAAGATAATGCAAGTGAAGTCTTAACCA 129233 33 100.0 34 ................................. AAATATGGGTATTCATGTCTTGTTTAGCGGTTCG 129300 33 100.0 38 ................................. ACTGGAGATAGTGAGTTAGGAAATAAGATTGTAAAATC 129371 33 100.0 37 ................................. TTTGATTTAGATGAAGATAGAAAGTCTATATTGAATG 129441 33 100.0 38 ................................. CCCTTCTAAAGTGCTTCCTAGAATAACAAGCGATCCCT 129512 33 100.0 36 ................................. AATAATGTCGCTGCGGCACTTGCTTGCTGGTCCTTG 129581 33 100.0 36 ................................. TTATCATAAAATGATGTGCTCCCTACATTTGCTTTG 129650 33 100.0 37 ................................. ATGATAAAGATAAGTTTTCTAATTTTAAGTGTTCTCT 129720 33 100.0 36 ................................. CTTAGAGAACAGTTTAATTGTGTTGTGTCTTGCTCT 129789 33 100.0 37 ................................. TTGCATCGCAAAGCCACGCATATATCTATAGGAGGTG 129859 33 100.0 38 ................................. TTGAATGTTCCTCTTGCTTTTACAGGTATTGTTAATTA 129930 33 97.0 38 .........A....................... CCATATGAATTGATTCTAATCTTTAAATTAGCGGTCTC 130001 33 97.0 0 .........A....................... | ========== ====== ====== ====== ================================= ====================================== ================== 15 33 99.6 37 GTATATAATCTAACCAATAGTTGGAATGTAAAT # Left flank : GTAAAAGATTTGACACATTGTTATAAGTGTGAAGAAAATTGCAAGAAAGGATTATTGAGAAAAATTAAACCATACACATTTACTCTATTTGCTAAAAAATATGGAGAAGAAAAGCTTTTGGATTGTTTAGAGAGAAATGAGAAAAATGGAGTTGTGTATCATCGAGATGGCATAAACGGAGATTATGATGATTTTGATGATGTAGAGCAGTTAATGAATTTTATCTTGACAGGAGTGCGATAAATCCCAGTTTGACAACTTCATATCCATACACACAAAGCAGTTAGTCTTAGGATTGACTGCTTTTTAAAAAGACACCATTTCAGTAATGATGTCTTTTGAGTGTTATTTTATAGTCATATCAAGGCTCATTCAACCGTGGTAAATTCGTGGTAAAATGAATGCTTTTTTATACTTCAAAATGCTTGAAAGTACAGTAGTTATACGGATAATCGAAAATTAGATATAAAATTTATATAAAAATAGTGTAGTATTTATGG # Right flank : TTTAAATGCTGTTTTGAAATACTGACTATACAAGTGATGAATTAAAGATTATAGTTTAATACCAACATATGATGTTTCGAAACTTAATGATTTATTTAATTATATTTTGTGAAGAAATAACAAAAAGAGAAGGACTTTACTTCAAAGTTAATTTTCTCCACCTTTATTCTAATAACATAGTTTAATTAATCTTTAATAGCCCATCTCATTTTGGTTGATTTGGCACGACTATTCATATGACATTCTTCTTTACTAGGTCTTATAACATTCCTTGCAGCATCACTATAAATACCAAGATTCTTCATTTCTTTAAAGGCCTTTTTAACAATTCTATCTTCTCCAGAATGAAAAGTAAGTATCGCAACTCTTCCGCCTGATTTAAGAATATTGGGGAGTTTTTCCATAAATTCAATAAGAACATCAAATTCATTATTGACCTCAATACGTAATGCTTGAAAAACTCTTGCAGCAGACTTTTTAATAGACTCTTTTCTTTCGTT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATATAATCTAACCAATAGTTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.20,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [81.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 274809-277278 **** Predicted by CRISPRDetect 2.4 *** >NZ_AKCB01000003.1 Coprobacillus cateniformis strain D6 cont1.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 274809 30 100.0 35 .............................. ATAGGTGAAATGAGTATGACAGAATTTAAAAACGA 274874 30 100.0 37 .............................. TAATCCGACAATTATAGAAAACTCACCTTTTAATTAC 274941 30 100.0 35 .............................. TAATCTTTAGAACGGACTTCTGCAGCAACTAACAA 275006 30 100.0 34 .............................. TTAAACCAATACCGACTGGCAAAAGAATTGTTAA 275070 30 100.0 36 .............................. GGAGTATCGGATAATTTAAGTAACGCGTCGAATGGA 275136 30 100.0 36 .............................. TAATAAATTGAAACTGGAGACCACTTATCACCAGAT 275202 30 100.0 37 .............................. TGAAGTAGATGCACTCGACTATTTTAATGATCATAAG 275269 30 100.0 36 .............................. TAAGAAAGTAGGTGAATTGGAAATGAATGGAAAAAA 275335 30 100.0 36 .............................. TTATAGCCGAATTTTCCACTGTCGCTTTTATTACAG 275401 30 100.0 36 .............................. CACAACATCAAAAGAACACTTAATTGAAATTGAAGA 275467 30 100.0 36 .............................. AACAATACTTTAAAACTTGTAAGAGTACAGAATAAA 275533 30 100.0 37 .............................. TCGGATTCAATTCATATTCATTTTCAAAAATATAAAA 275600 30 100.0 36 .............................. TTAATAGACATACAGTTATAATTACGTTTCTTCATT 275666 30 100.0 36 .............................. ATAAGAGATTGACGTGAACGACTAAGTGAATCATTC 275732 30 100.0 37 .............................. GGACTTGTTGTATGTTCTAAATGTGGTAGAAAGATGG 275799 30 100.0 35 .............................. TTAAACAAATAAAAAAAAGAGGTACCCTCCGCCGG 275864 30 100.0 37 .............................. CTTTTTAATTTCTTGTCTGGATATAAGGAACAATACA 275931 30 100.0 35 .............................. AATGACCTACCTTTATTGGTTATAAACAGTCATTT 275996 30 100.0 35 .............................. AATATTTAAATTTATTAAGCATGAAGAATACTATG 276061 30 100.0 36 .............................. TAACGATATGACGTTTATAAAATCCAAAATCCTTTA 276127 30 100.0 36 .............................. TTTTGCAAGCCTCAAAGAAATAATCCCAAGAAAAAC 276193 30 100.0 35 .............................. GCCGTCCGAAGAGGTTGATAAGGTTAACCCAATCC 276258 30 100.0 36 .............................. GGAGAAGACATATACATATCTTGCATATGATCTTCT 276324 30 100.0 37 .............................. TCTAAGAATTGCCACAACTGATTGTTTTCAAAATCGG 276391 30 100.0 35 .............................. TCAGAAATATCTTCAACTTCCTCAAACCCCTTTTT 276456 30 100.0 36 .............................. AAATACTACTGTTGCTAATGTTGTACGTAATTTATT 276522 30 100.0 36 .............................. TTATAAATTTTAGGACATATATTTGTATAAGTTTTT 276588 30 100.0 36 .............................. TGCATAATCAACGCCACTCAAGAAAGGAAACAAGAA 276654 30 100.0 36 .............................. TCATGTGTTAATAGATATTGGCCTATTTTCTTAGCG 276720 30 100.0 35 .............................. ACATAATTGACCAACTAGGTGGAGAGTTTGAGGAT 276785 30 100.0 38 .............................. ACACATGGGCTAAGAACATTAGTTTCCCAACACGTAAA 276853 30 100.0 36 .............................. TTATCCATTAAATAATCTATGCTCACTTGGAAATAA 276919 30 100.0 36 .............................. TATGCTAGCTCGTATTTCTCTTTCAAGTCATATCAC 276985 30 100.0 35 .............................. TACATCAAGATGTAATCCCTTTATACGACTATTTC 277050 30 100.0 36 .............................. TTTGATGTGTAAACAGTCTTCGCTCTTTGATTAACT 277116 30 93.3 37 ........C.........G........... TAAGTTGGGGGGAGTACTGACTATGCAACAGGGAGGT 277183 30 96.7 36 ........C..................... TAATAATCAACAGTCTGTTTTTGTTTATAAAGATAG 277249 30 93.3 0 ........C....................G | ========== ====== ====== ====== ============================== ====================================== ================== 38 30 99.6 36 GTTTAATATCAACATATGATGTTTTGAAAT # Left flank : ATCTCACCAATTTCAGATACAACAATTATGGCATCAGCAGGTGCACAATGTCATCATGTTGGTCATGTTTCTACACAACTTCCTTATGCGATGGTTGTTGCAGTTGCATGTATTGTTGGTTATATTGTTGCTGGTCTGACACAGAATGTTTGGCTAACATTTTTAAGTGGCTTGATAACTTTATTAATCATGATATTTTGTATTAACAAGAAAGGCTAACCCTGTTGTGAAAAGATAAAAAGTTAAAATATGGTGTAAAATTAAAGATGATAATCTTATTAGAAACAGTATTGTTAATATATTTTATATGTTTGAATTGATTATAATTTACCAGCAACAATTATTGATATAATCAAAAAAACATTGAATATATCACATAAAAATAGAATTTTATGTTGATTTATGATATAATTATTTTTATTTGGTAAAAATATGAAAAAATATTGATAAATTCAATAGAATTTTATTTCTGCCAGTTATGAAAGTGTTGTTTTATCTGG # Right flank : GTTATTTATAATAAAAATATCCCTATATTAAGATGCTATAGGGATATTTTTTTATCTTCAATTTCTATTTTAATTTTTTCATAAAGTTCATATGTAGCAATACAATCAGCAATTGATCTATGTTCATTATTGGAAAGGTTTAAGTATTGGACCATATCTGTTAAACGATGATGTTTCATGTGAGGATAGACCTTTCTACAAAACTGAAGTGTATCCATATATTCATTTTCAATATCTATATGAAATTGATTTGCAACAAAGTTTAAGTCAAATGATGTATTGTGTCCTAATAAAATATCATCACCAATAAAACTGAAAACATCGTCTCTAATCTCATCAAGGGTTGGCATTCCTAATAACATATCATTTGTAATTCCCGTGAGTTTGGTTATAAAAGGGCTAACTTCACGTTCTGGATTAATGAGTTGAGAATATTTATCTATAATTTGTTGATTTCTTATTTTTAAAATTCCAACTTCAATAATCTTATCATCGGCCCA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAATATCAACATATGATGTTTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //