Array 1 195014-196124 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHCLV010000013.1 Enterobacter oligotrophicus strain ECC486 contig_0013, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 195014 28 100.0 32 ............................ TGTAGCGCTCGCCGCAGTATCAGACCGAAGGT 195074 28 100.0 32 ............................ ACAGGAAATGTGAGGACTGGCGCGGGCTGGAA 195134 28 100.0 32 ............................ AAACAGGCGGGTGTAGATTGCGTCACCTGTTT 195194 28 100.0 32 ............................ CCCATCAGGTCAGCAAGGGCATTCGTGTTTAG 195254 28 100.0 32 ............................ AGACGTCGCGGTAGTCGAATCCGGGTTTAAGT 195314 28 100.0 32 ............................ TGATTCCAAAGCAGTGGGATGACAACACAACG 195374 28 100.0 32 ............................ CATTGAGGTTTATCGCTCTATGAGTGGTCATC 195434 28 100.0 32 ............................ TTCATGCAGGTTCCTTGTGGCCAGTGCGTCAA 195494 28 100.0 32 ............................ ATCGTAATGGCAATACCCCCTACAGCGGATAA 195554 28 100.0 32 ............................ ACTGAGAAACTCAGCCTGGCGAACGCCACCAT 195614 28 100.0 32 ............................ CTGTTTAATGACGATGTGGCGAAGATGCTTCA 195674 28 100.0 32 ............................ TGCAGCTGGATAACCCGCTTGGTACGGTCACT 195734 28 100.0 32 ............................ GGCGATGCTGAGGTGGGCGACCAAACCCACCG 195794 28 100.0 32 ............................ TGGGAACCGTCCTGCTTCGTCCATTCTTCAAT 195854 28 100.0 32 ............................ GCATGACAAAGCCAGTCATTAATCAGCTTGGG 195914 28 100.0 32 ............................ TGGCTGGGGTTTGGCACATGGACGCAGCGCAC GCA [195926] 195977 28 100.0 32 ............................ GTTAGCACCGTTTTACATCCGCTTATTGCGTG 196037 28 100.0 32 ............................ AGAGAAACGGCATATCCAGAGTCTGGATCTTT 196097 28 96.4 0 .......A.................... | ========== ====== ====== ====== ============================ ================================ ================== 19 28 99.8 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : GCTCCCGCAAACTCAACCCGTTTGTCGTTGTCTTGGTGCTTATCTGGAGGAAGTCAAAACCGGCCTTGTGGAATCGATGAGTGATTTTCAGATAGTAGAATTTGAGGAAGAAGAGGAGCCACCGCGGCAAAAAGAGTGGTTGCTGGAAGGTACTGAAACCAAGTGCGATTACTGCCGCGCATTAAATCACGTGCTGCTGGTATCGCATTTTGACCGCGAGATGCTGCCGTACCTGACGGGATTATTGCACGACATTACTCACTCAATGGCGGCAGATGTGGTTGCGCCTCGTAGTGCAGAAACCGTTATCCATATTATTCCCTGATTATTTTGTCGCGTCGGGGGAGTTGTTTCGATGCATGCAGGTTAAACCCTTTTTTCTGGCGGCTTTGTAACTCATTGATTTATATGATGAGGATTTGCGCTTTGAAAAAAAGGGTTTAATGCGCATGTATTGATTATTTTCTTATACAACAATAAGATGGCGAGGTTTCCTTTCA # Right flank : ACACTCAATGCCCATCTGGACGAAGGCGTTAATGTTCAACGCCACACACACACTCTTGCTAAAAAGGTCTTGCAATTACATGCACCAAATCGATCATTCATAAGAACACATCACTATTATCTCTATCATTTTTATTTAAATCAAAAAACATATCCAATCCATAAATATAATCAAAGGAATGCATTATTCATTGGGATGATAAATGCGCTATTAAACACACTTTCTGTTTTATTACCCCTCTGATTATTATTCATTTGATATATATCACATTTGTCTTTGTCTAAAACTCGCTAACATATCCTGCATTCAATTCTTTGAAATAAAAGCCTTAACATGCCCGCAAACAGCATCACGCCTGGCGATTTAAAAACCATACTCCACTCTAAACGCGCCAATATCTATTATCTGGAGAAATGTCGTATTCAGGTAAATGGTGGGCGGGTTGAATATGTCACCCAGGAAGGGAAAGAGTCATTTTACTGGAACATTCCCATCGCCAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 206051-206679 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHCLV010000013.1 Enterobacter oligotrophicus strain ECC486 contig_0013, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 206051 28 100.0 32 ............................ ACTCTGGCCGAGGCTGTCGACAATTTCGATAA 206111 28 100.0 32 ............................ TACCATCCAGCATTTTTTGCGGGCCCGCTCGA 206171 28 100.0 32 ............................ AGGCCAACATGCGCCGGTTGTGCACCTCGATA 206231 28 100.0 32 ............................ TTACTCCGGCGTGGCATAGTTGCGCGATTGTC 206291 28 100.0 32 ............................ GACGCATAGCCGCCGGAAAACGCCGACAATGC 206351 28 96.4 32 .................T.......... TTTGCTAATAAAGCTCGTGAGATGTGGCACGA 206411 28 100.0 32 ............................ GTGTACCAGCCCTCTCACAGCTTGGCGTACAC 206471 28 100.0 32 ............................ TTGTAGACGCGCGCTGTGTTCGTTTGTCCTGT 206531 28 100.0 32 ............................ ATAACCTGGGGCCTGGGCTGGGGGTGGTGGCG 206591 28 100.0 32 ............................ ATTGTACAGGCTGCCGTCGGCCATGCTGTCTC 206651 28 100.0 0 ............................ | C [206676] ========== ====== ====== ====== ============================ ================================ ================== 11 28 99.7 32 GTGCACTGCCGTATAGGCAGCTTAGAAA # Left flank : ACGTGCCACGCGCTCGCTTTCATCGGGCGTCAGCGTTCGCCCTGCGCTTTTGCGGCGAGCGACATTGCGCTCGTTAATCCCCGTCACGCGAAGGATGTCCGCTTTCGACATCGACGTCCATTCATGAATGTTATCGAGGATACTGACGGGTAAACCTTGATTGAGGTATTCAACTAACCGCATACCACGGTTTGCAGGTAAACCGGCATAGCGCCAAAGCGCGTTATCAGCAGGTTTCTGCGCGGGAACCCATGTTCTCATAGTACCTCCTGGTTGAAGTCATTTGTCATAGATTAGTATAGTCATTTGTCGTGGTGTTTGGAATGGATGTTTTTTGCGCGGGGCGGTGGAAGAGAATTCAGCTGTTTACCCCTAATTTTGGAGTGATATGTAATGTATTGATTTATATTGGAAATATTGTGGGTGGGGTAAAATAGGATAGGAATAGGGTTTTAGCTTTTTTTGTATGAAAATCATAATGGTAAGGGGGTATTATTTCA # Right flank : AATAGAAAATAAGGTCTTCACACCCTTACATTTTGCACTGTCGAACAGCCAGCGCTGAGCTGAAAAGAAACCTCAAATAACGGTTTATGTAATCGATCGCACGACCAAAAAATAAGGCCGGGACTATCCCGGCCTTATTTAATATTCATCTGCCCTTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTTAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTTTCAGCGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //