Array 1 1392994-1393436 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT669839.1 [Clostridium] ultunense Esp isolate Clostridium ultunense strain Esp chromosome 1 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================================ ================== 1392994 30 100.0 39 .............................. TATTATAGTACGTATGCACGTATATGGAGACAAGCTAAA 1393063 30 100.0 48 .............................. CTTTTGCAGTTCTAATACTCTTCACTTCAAATACATGAAATTTATATG 1393141 30 100.0 38 .............................. TGTTGCTGTGTATTTCTATATTTATCAAATCTATTTTA 1393209 30 100.0 36 .............................. ACATAGCTATTAATTCTTCATGTTCTTCTTCATCTG 1393275 30 96.7 35 .G............................ TATTATAGTACGTATGCACCGTCATCTATTGTTAC 1393340 30 100.0 36 .............................. CACAATAATGGTAGTGCAGCTATTTCATATTCATCA 1393407 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ================================================ ================== 7 30 99.5 39 GTTTATAGACTACCTATAAGGAATTGAAAC # Left flank : TGATAAAGGAGTTTTCAATATAAACAATTCAATTCTATATATAGATAGTGGTCTGGGGAACAGTATATTCCCTATTAGACTCTTTAATAGAGTACAGATAAGTAATATAACTATACAACCGATAAAGAATAGTTAACATAGATAATTAAAAACATTTGACCTTAGATTAAATTCCATTTATAATAGTAGTAGGATAGATAAGCACCCTTAGCTCAGTTGGATAGAGTCGCTGACTTCGAATCAGTTGGCCGGGGGTTCGAGTCCCTCAGGGTGCGCCAATTTTAATATAGGTTTGTGATATAAGGTTCCATAATAAATTGTCGTCGACCTCAGGTAGTGCAAAAATCCCTGGGGATCGACGACAATTTAATATTTAAAGCAAATCTGTTAACTCCAACAAGTATAAAGGAAAAAAGCAAAAATCAAAATTCAAAAATCCAAGCATTTCTGATATGAGATAATACATTTGTGAAAGATAACAATATCAATATATGTAATGC # Right flank : ACAAGGAAAACAAATAATACCTATGATATGGCTAAAAACGCATGTTTACTAGACTACCTATNAGGAATTGAAACCTAACCATACGATGAGGAACGTGTTACGTGGTTTGGTTTATATGGATCTATGTCAATAGTTTGGACAAAAATTTAGGTTTTTTTGTGGGTCTCCGCCACCATTGACAATCCAAACATAAATGCTTTTAGGTTTCTACCCGAAGGCGATAAACTCAAAGCAAGCTATGTTTTGTGCCTTCGTGGTGGAATATTGTAGCATTTATTCATTAGTTTATCAAGGGCAAGCCCTTCGGGTGGCTAGTGTTCCCTCAGGCTTAAAATCTAAAGCAAGCTATGCTACTTTACATAAATACTCATATTCACTTGGAGTTATGTAATTAATTGATGAATGAATTCTTTTTCTATTATAAAATCCTTCTATATATTGAAATAACGCTAATTTAGCATGATTGTAATCTATAAACGTATTAAGATATACACATTCTT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGACTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 2 1395735-1396234 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT669839.1 [Clostridium] ultunense Esp isolate Clostridium ultunense strain Esp chromosome 1 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1395735 30 100.0 37 .............................. CCGATACCACCGGGTAAGTGGGAGAAAGGAGATAATT 1395802 30 100.0 36 .............................. AACCTATCATGACACAGGAAGAATTTGATAGAGCTA 1395868 30 100.0 36 .............................. AAGAATTGATGCAATCAGAAGAAATGCAGAGTATTT 1395934 30 100.0 37 .............................. AATATATGGGCGAATAACTCATATATACAGTAATGTT 1396001 30 100.0 37 .............................. TTGGGGTAATCGGAGATGGTGGATAGATGGTTGTTTC 1396068 30 70.0 37 ................NNNNNNNNN..... CCGATACCACCGGGTAAGTGGGAGAAAGGAGATAATT AATT [1396093] 1396139 30 100.0 36 .............................. AACCTATCATGACACAGGAAGAATTTGATAGAGCTA 1396205 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 8 30 96.2 37 GTTTATAGACTACCTATAAGGAATTGAAAC # Left flank : GTTTTCCACTTGTTTCCAGGCTTTTCCTTATGCTTATCATAATAGGTGCTTCTAGGATATTTTAGCACCTTGCACATAGTATCTATGCTGTGTTCCTTAGAATTAGCTTTTATTATTTCAAATATAATATCAGGATTTATTTGGTTGCGAATATGGCCATAGCTTTTTTTAATATATCATTTTCTTCCTTAAGTCTTGCATTTTCCTTCTTGATTTTTAGAATTTCTTCAAGATTTGTGGTATCTCCCTTTACATCTATCGGTGTTTTCTTCTTTACCCAATTACGTATTGCTGTTTGGCTTAGGCCATATTCGTCTGCTACTTCCCTAACTGTTTTTCCTGATAATACTAACTCTGCAATCATTATTTTGAATTCATCTGTATAAGTTTTTCTTTTAGACATTTTATGGACACTTCCTTCCTCATTTAGTAGTATATAAAAAACCTTATTTAGTGTCCATACTTATATACTAACATCAGAGGTGCTATATGGAAAGTGA # Right flank : CAAGATATTGACATGGTTCACGAATATATGTCAAGCNTTTTATGTTACTAGACTACCTATAAGGAATTGAAACAACNNTNTNGNACGTATGCACGTATATGTCAAGNCTNNNNNNNGTTACTAGACTACCTATAAGGAATTGAAACGGGCGTAAATCGGTTCTACCCAGAAAAAAAATATTAAATAACCTGTTACTAGACTACCTATAAGGAATTGAAACCAACGATCAGCAAATGCTCCATTATTTAAGTTGAAAGCAAAAGTTTACTAGACTACCTATAAGGAATTGAAACANGATATTGACATGGTTNNNTGTTTATGTTACTAGACTACCTATAAGGAATTGAAACAAGATATTGACANNNNNGGTATANGTCGCTNTATCGTTTATAGACTACCTATAAGGAATTGAAACGCTCTNGNANATTCTAGTATTGTATNNAGTTCAAAGCTAAAGTTTACTAGACTACCTATAAGGAATTGAAACTTTGTACTCNAAA # Questionable array : NO Score: 9.07 # Score Detail : 1:0, 2:3, 3:3, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGACTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.88%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [2-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 3 1396277-1397969 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT669839.1 [Clostridium] ultunense Esp isolate Clostridium ultunense strain Esp chromosome 1 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================== ================== 1396277 30 100.0 43 .............................. AACNNTNTNGNACGTATGCACGTATATGTCAAGNCTNNNNNNN 1396350 30 100.0 44 .............................. GGGCGTAAATCGGTTCTACCCAGAAAAAAAATATTAAATAACCT 1396424 30 100.0 43 .............................. CAACGATCAGCAAATGCTCCATTATTTAAGTTGAAAGCAAAAG 1396497 30 96.7 27 T............................. ANGATATTGACATGGTTNNNTGTTTAT Deletion [1396554] 1396554 30 100.0 35 .............................. AAGATATTGACANNNNNGGTATANGTCGCTNTATC 1396619 30 93.3 42 ...TA......................... GCTCTNGNANATTCTAGTATTGTATNNAGTTCAAAGCTAAAG 1396691 30 96.7 39 T............................. TTTGTACTCNAAAGTCTACACCNNNCTATTATTAAGTCN 1396760 30 100.0 41 .............................. TGTCTATCACTTCATTTGGTNACGTATATGTCAAGCCTTTT 1396831 30 93.3 37 ...TA......................... GCTCCCCATATTTTNNNNNTCCTCANAGAGAANNNNT 1396898 30 100.0 44 .............................. TNTNNGATAGATNTNNTNTCATTGGGCTGCAGTCCAGGAAGNTN 1396972 30 93.3 37 ...NN......................... TCNNCANANTNTCTTATAGCTCTTATTTGAGCATCTA 1397039 30 93.3 43 ...NN......................... CCAATTCAGTTACTGCNNNNNNTCGTTTTTGTCANGCTTGATG 1397112 30 93.3 37 ...TA......................... CTTTTGATTTGGCATACTGTACATNNNTTTTCTAATG 1397179 30 100.0 36 .............................. ATTGANNACGGAAGATGTTGAAGTCTTCAANANGAA 1397245 30 100.0 34 .............................. GATATATGTAAAAAANNNCNTGNATGTAATGACG 1397309 30 96.7 45 T............................. AGGCTGATATATTNCTAGANAATACATAAAACTAANNNATNNANN 1397384 30 100.0 40 .............................. AGNNGTCAAGTGGTNCTANCTTCATGTTCTTCTTCATCTG 1397454 30 93.3 46 ...TA......................... GANAGANGCTCATATGAAACANTAAGGANNNNTGTTTGTCTCCATN 1397530 30 96.7 38 N............................. CTATCCTAAATAAGCCCGAATGANNNCTAAAAACGCAT 1397598 30 90.0 26 .N.TA......................... TTTGNAGTNNNCTAGTTTTTTACCNG Deletion [1397654] 1397654 30 100.0 45 .............................. TNNGANTGAAGAATAGATGGCTCCTANNNNATGTCAAGCCTTTTG 1397729 30 100.0 40 .............................. ATGGAATTTGAGTACTTTGACGNNAATACATNCTTNNTNA 1397799 30 100.0 37 .............................. ACNTNNCTATGGAGATACNNNCTATNAGGTTATATTC 1397866 30 100.0 44 .............................. GANAANNNNCANATAAAAAATNNNNTTNCANCAANNNTNGNNCT 1397940 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ============================================== ================== 25 30 97.5 39 GTTACTAGACTACCTATAAGGAATTGAAAC # Left flank : GGTAAGTGGGAGAAAGGAGATAATTGTTTATAGACTACCTATAAGGAATTGAAACAACCTATCATGACACAGGAAGAATTTGATAGAGCTAGTTTATAGACTACCTATAAGGAATTGAAACAAGAATTGATGCAATCAGAAGAAATGCAGAGTATTTGTTTATAGACTACCTATAAGGAATTGAAACAATATATGGGCGAATAACTCATATATACAGTAATGTTGTTTATAGACTACCTATAAGGAATTGAAACTTGGGGTAATCGGAGATGGTGGATAGATGGTTGTTTCGTTTATAGACTACCTANNNNNNNNNAATTGAAACCCGATACCACCGGGTAAGTGGGAGAAAGGAGATAATTGTTTATAGACTACCTATAAGGAATTGAAACAACCTATCATGACACAGGAAGAATTTGATAGAGCTAGTTTATAGACTACCTATAAGGAATTGAAACAAGATATTGACATGGTTCACGAATATATGTCAAGCNTTTTAT # Right flank : CACNNNCNTNTTCNTGAACTGATTTANNNNNNNNNTAATAATTGATGANATAGGCTATTTACCAATAGATTTAGATGCTTCAAATCTATTCTTTCAACTAATAGCTAAAAGATATGAAAAGCANTGNACAATAATAACTACAAACTCTAATTTTTCAAAGTGGCCAGATATATTTGGCTCACCTACTATTGCTAATGCTATATTAGATAGACTTCTTCATCATAGCCATATTATATCTATCAAAGGGTCCATCCTATAGAATCCAATCTAAAATTCAGTACTTAGATAATAATTCGATGAAGGATTCTGAAATGCCTTAGGCCACTTTTTGTACATAATTATTTTCCACTTTTTGATCATTCTTATATTGACATTTACANNNNATATGGCTTAATTTGAATATTGCACTTCTAAATAAGAATTTTGCTCCNNNNNNNACCAAATTTACAAGAGAACTTGAAATTTAGGGAGACTGTGAAATAAATTGTGTATGAAAATCC # Questionable array : NO Score: 9.13 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACTAGACTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [4-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA // Array 4 1724823-1725001 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT669839.1 [Clostridium] ultunense Esp isolate Clostridium ultunense strain Esp chromosome 1 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ============================================================= ================== 1724823 25 100.0 61 ......................... NNNNNTATGTTACTAGACTACCTGTAAGGAATTGNNNNNAGAATATGCATTATTTCGTTAC 1724909 25 100.0 43 ......................... GATAAACAAAGTGGAGTATATTGCACGAGTATGGGCCTGTTTA 1724977 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= ============================================================= ================== 3 25 100.0 52 TAGACTACCTATAAGGAATTGAAAC # Left flank : AAGAACCGTAAAAAAATATTATGAAGGATATGAAGGAAAACCTAAAACTAGAAATAAAACAAGTAAATTAGATAAGTATAAGGATGAAATAATTGAGAAGTTACAGATTAAGGGAATTAAAGTAAAGGCTATCTATGAATATTTCTTGGACAAGGGTTATGATGTTGGAGGATATTCCAACTTTAACAAATATATTAAGAATAATGATTTAAAGCCTACAGCCAAGTCTAAAGGACATCCAAGATTTGAGACATTACCCGGCAAACAAGCTCAGGTGGATTGGAAAGAGGATGTAAAGCTAATATCAAAGTATAATGAAGAATTTATCATTAATGTCTTCAGCTACAAACTAGGCAATTCAAGATATTGCCATTTTGAGTACAAGAAACAAAGAACGAACCCAGCAAGATGTATTTGATTCCTTAATTAANNNNNCTAAAAACGCATGTTTATAGACTACCTATAAGGAATTGAAACNNNNNTAGTGGCTTGATGGTTTA # Right flank : CACATAGCTTCTTCATCAGTTAATCCTTCTTTTATAAGTTTATTGTAAATGGTAAAATGAAAATGTACAATTAATGGAAAATAAGAATGTACAAAAGTGTACATCCTTGCTATTCTAGATTTTAGGGAGGGATAGCAATGGAATGTAGCTTAAAAGCACAGTTAAATATAATAAAACTTATGGATCTAAAACCTAATTTTTCTGATTTAGCAAGACAATATGGCTTGGATAGAAGAACCGTAAAAAAATATTATGAAGGATATGAAGGAAAACCTAAAACTAGAAATAAAACAAGTAAATTAGATAAGTATAAGGATGAAATAATTGAAGAAGTTACAGATTAAGGGAATTAAAGTAAAGGCTATCTATGAATATTTCTTGGACAAGGGTTATGATGTTGGAGGATATTCCAACTTTAACAAATATATTAAAAACAATGATTTAAAGCCTACAGCCAAGTCTAAAGGACATCCAAGATTTGAGACATTACCCGGCAAACA # Questionable array : NO Score: 7.36 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:-1.29, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TAGACTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : NA // Array 5 1727192-1727356 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT669839.1 [Clostridium] ultunense Esp isolate Clostridium ultunense strain Esp chromosome 1 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1727192 30 100.0 38 .............................. GAAATTCCCTCTTCATTACAAATCCTCCTTTTAATCTA 1727260 30 100.0 37 .............................. TTTCACCTCCTCACATATCCCCTTTGCCTACATTTCT 1727327 30 96.7 0 .............................T | ========== ====== ====== ====== ============================== ====================================== ================== 3 30 98.9 38 GTTTATAGACTACCTATAAGGAATTGAAAC # Left flank : AAACACACTTGGCTACCGCCATAGGAATAGAATGTGCTAGAAGTAGATATTCAACATATTTTATTTCTTTCCATGAGTTAATAGCACAACTCAAAAAAGCTCTTTTAGAGAACAGGTTAGAGACAAGACTTAAGCATTTTGCGAAGTATAAGATACTAATAATTGATGAAATAGGCTATTTACCAATAGACTTAGATGCTTCCAATCTATTCTTTCAGCTAATAGCTAAAAGATATGAAAAGCACTGCACAATAATAACTACAAACTCTAATTTTTCAAAGTGGCCAGATATATTTGGCTCACCTACTATTGCTAATGCTATATTAGATAGACTTCTTCATCATAGCCATATTATATCTATCAAAGGGCCCATCCTATAGAATCCAATCTAAAATACAATATTTAGATAATAATAGGGTAAAGGATTCTGGGGTCTCATAGTCCACTTTTTGTACATAGTTATTTTCCACTTTTTAGACATTCTTATATTGACATTTACA # Right flank : TAGAACCATTGTAGGGTATTTTGTACTGGAATTAATTAAAATTATAGTATCCATTTTCACACAGTCTGCCATTTCTATTCGACCAATTTGCTGCTCTAGAAAAATGAAGGGATAAACAGGTTCTAGGGGTCTGTTTTTCCACTCATTTATTTGTGGAATAATTTTATCTGTTATTTTGCTAACCATATCTGCTGATACTTCAATTCCATAGAGATCCTTTACCTGGTCATGAATATCCCTAGTTGACATTCCTCTTGCATAAAGGGATATTATTTGTTCTTCTATACCTGATATATCCCTTGTATGTTTTGGAACTACTACTGGTTCAAATTCGCCATTTCTATCTCTTGGTATATCTAACTCAATTTCTCCAAAACGAGTGCTTACAGTCTTTTTCGTAGTACCATTTCTACGATTATCTGTATTTTTGTTCTTTTTATCTCCTTTTACATATCCTAATTCTACCTCTAATTCTGCCTCTAACATCTCTTGTAGTGCAT # Questionable array : NO Score: 8.31 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGACTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 6 2153017-2150705 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT669839.1 [Clostridium] ultunense Esp isolate Clostridium ultunense strain Esp chromosome 1 Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 2153016 30 100.0 37 .............................. GACCAAATCATAAAGTGCAAGGCGCCACTGTTATTGT 2152949 30 100.0 37 .............................. AAAATCTCAGGGAAACCAGTGCTAGAAGTAGGAACAG 2152882 30 100.0 37 .............................. GAATTACTTTCGTCTATTTCTACACCATATATCTTTT 2152815 30 100.0 38 .............................. GAATCTTAGTAAGGCAAGGCGAACTTGAACCTGCTTTT 2152747 30 100.0 36 .............................. GAAGTAGAGCTATAGACTTAGGGATATTTAAACCTA 2152681 30 100.0 37 .............................. TCTGACACGCTATCTGGTGAGGTGGTGAGCTTCATAA 2152614 30 100.0 37 .............................. TGCTGCAGTTGCTTAAAGAGAATGGCATTTCCCCTGT 2152547 30 100.0 37 .............................. CAGGTTTTGTTAATATAATCTATCAATGTAATATTTT 2152480 30 100.0 37 .............................. TAGAACAGATCCAGGATTATGAAGATGGTTTTTTTGC 2152413 30 100.0 37 .............................. TCCCATTTGTTGCCTATAATCTCCATTGTGTCATCTT 2152346 30 100.0 38 .............................. TTGATGTTGACGAAATCAATGGAACTGCAACTGTATTT 2152278 30 100.0 36 .............................. CCATCTGGCAATTCTTGTGTATTCACATTAACATTT 2152212 30 100.0 37 .............................. TCGTGACATCCAGGATGTCTCTTTTCACAGTCTATAC 2152145 30 100.0 37 .............................. AATACTCATCATCTGTTATATCAAATACATCTTCATA 2152078 30 100.0 37 .............................. TACCATTTGAAAATTTCAGCCAAGGTGTAACTAACCA 2152011 30 100.0 36 .............................. CAAGTGCTAATTGTTTGATATCCTCAGCTTCCGATG 2151945 30 100.0 37 .............................. GCGATATAATTCCTCTAACAACTATTTAAAAGCTCAC 2151878 30 100.0 37 .............................. TCAAAATCGCCAAACTTGATTAAACATCCAAAATAAA 2151811 30 100.0 37 .............................. AATAGTAATGCTTTTATATTAATTATTAAAGATGAAA 2151744 30 100.0 37 .............................. CCAAAGTAATCCCTTATATATCTCATATTGTTTTCCA 2151677 30 100.0 37 .............................. GAACCTGCTTGTGGTATGGGACACATTAGTAAGGTTT 2151610 30 100.0 37 .............................. AAACCTCCAAATAGAAATATGATTAGTAGAAATGTTC 2151543 30 100.0 37 .............................. GTAAAACCTTGTTTTTGTAAATCTATAATGTACTCAA 2151476 30 100.0 37 .............................. TAAGTGTCACTCATGCCATAACCCGAATCCATAAACA 2151409 30 100.0 37 .............................. ATGGTCACTTCGTAGCAATAGAAGTCAAAGGATCCGG 2151342 30 100.0 38 .............................. TAGTCAACATCTGCATCTGCTGCTATGTCAATATTTTG 2151274 30 100.0 37 .............................. TAAACTCAATAGTTTCACCATATAAACCCAGTAACCC 2151207 30 100.0 36 .............................. ATATTTTATACCTGCTATACCAATAATTGTTAATTT 2151141 30 100.0 38 .............................. TTGGGCAGATCGGCTCTACCCATATACTATGCTACTAT 2151073 30 100.0 39 .............................. GTATTTGTGCTAGAGATATTTCATAAATACTGCCTTCCC 2151004 30 100.0 37 .............................. TTTCCTGAATATGTAGCAAGAACCTTGATTGAATCTA 2150937 30 100.0 38 .............................. CTGAATTGTTTGGTATTTTAGTTGATTTCCTGTAATTA 2150869 30 100.0 38 .............................. ATGGATGATGGCAAGATCGTAAGTAACGAAACAGGCGA 2150801 30 100.0 37 .............................. GTAGGAAAAATAGATAGGGATAATCCTAGAACTGAAA 2150734 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 35 30 100.0 37 GTTTATAGATTACCTATAAGGAATTGAAAC # Left flank : TGTTTCAAGATGGTAATAGGTGATACAAATGTTTGTAATATTAGTTTATGATATAGAAGTAAAAAGAGTTGCAAAAGTCTTAAAAACGTGCAGAAAATATTTATATTGGGTACAAAATTCAGTATTTGAAGGAGAAATTTCCAATGCCAATTTAGTGAAATTAAAACTTGAACTGAAATCAATAATAGATGAAGAAAAGGATTCAGTAATAATATATTCCTTTAGAACTACCAGGTATTCAAATGTAGAAATAATGGGTATAAAAAAAGGCGGAGAGGACAACTTTTTGTAATACACAGTTTTTTAAATGAAGATACAAAACTGTCGTCGACCCCAGGTAGTGCAAAACCCCCTGGAGATCGACGACAATTTATTTTTTATAACAAATGTGTAGATTTCAATAGATATATAGGGAAATAGAAAAAATATAGTATTGAAAATTCAGATGTTTCATATTTGACAAAAAATGAGAAACATAGTAATATCAATGTATAGAATTA # Right flank : TCCCCCCAATAAAAAATCCCACCTGTGTATTTGTCAATTGAAATTTGGTTCTCTTGCAATTTTGGTGATTTTAATGTAGCCTCATTAAGCACATAAGAATTATTAGCATTTTAACCAAATATTTCCTGGTGATTGAATACCTTTATCCTCAAAAGATCAAACTTGCATCTTCCATAACTCATACGCTTAATTTCTTTTATTTTGTTGATTATTCCTTCTAGCAATCCATTTGTATAGCTACTAGTAAAACTGTTTTTGACTGAATCTATATCTCTTTTAATTCCATTAACAAAAGAATTTAATTCAGGAATATTAAATTCCCTTGCTTTTGTCATCCATTTTTCCAATGGTAATTTGTTGTCTAAGAACATACCCTTAAAATTGTCAATCAGCTCTTTTAATTCTACAAGCTTATGGTAGCTTTCTTTAAGGCTTTCTAAAATATTGAGCTCGTCCTTAGTAAGATTGGAATCGTTTTTACATATTATTTTAGTTACAGT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGATTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [63.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : NA // Array 7 2173336-2170374 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT669839.1 [Clostridium] ultunense Esp isolate Clostridium ultunense strain Esp chromosome 1 Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2173335 30 100.0 36 .............................. CAAGGATTAATAGATGATGATTTAGACTTGGTTACA 2173269 30 100.0 36 .............................. ATTGATTTTGGTAAAGCTGCAATTAAAACTTCATCA 2173203 30 100.0 36 .............................. CAATTTACTTTGAGGAGGTAGAATAATGAGTAAAGC 2173137 30 100.0 36 .............................. AAAAGGAAGTGATAAACAAAAAACCACTATCAAATG 2173071 30 100.0 38 .............................. TCCCACCCTCCTGGAATTCACCCAGCATCTTTGTGCCA 2173003 30 100.0 35 .............................. ATCTCATATATCCTAATTCAGTATTCTCTACATAA 2172938 30 100.0 37 .............................. TTGACAGTGCAGATAGCTGTGGTAAAGATGCTATAAA 2172871 30 100.0 37 .............................. ATCCAGAAGCTATTGAGATAAGTGAACAAAGATTAAA 2172804 30 100.0 36 .............................. ATAAATGTTACTGTATGGATAATTTAGAGCTAATGA 2172738 30 100.0 36 .............................. ACAGATAAGGTGGTATCTAATATAAATAGGCAAAGT 2172672 30 100.0 36 .............................. AGGCTTTAATTGCTGTGAATATTTTTCTGTTAGCTT 2172606 30 100.0 37 .............................. AGAGTGATTATGGTGGATAGCCAAGGTAGAGAAATAC 2172539 30 100.0 37 .............................. TTGTATGCATGGTCTTGGATTATATTATGGGACTTAT 2172472 30 100.0 36 .............................. AGAGATGTGAATAAAAAACCAGTCCCACAATATTGG 2172406 30 100.0 37 .............................. GAACTAAATATAAAGGTGAATTAAAACCTTTTGCTAA 2172339 30 100.0 37 .............................. TGCTGACGACTTGGTTAGTGGTATTGAAGAAGCCTTG 2172272 30 100.0 37 .............................. CAACAAATATAAACGAAAAACTATTGAAGGAAGTAAA 2172205 30 100.0 37 .............................. CTCCAATCGTATTTTTCTCTCACACAATCCCCTCCAC 2172138 30 100.0 36 .............................. CTCACAATATGCTACATCACTTGAAAAAATGAAAAT 2172072 30 100.0 36 .............................. TTTGTGCATCTATGGATTCTTCATTTTGATTTTCTG 2172006 30 100.0 37 .............................. CTATTTGAATGTTATTTCTACTGCAATACTCTTTTAT 2171939 30 100.0 34 .............................. TGTAAAATAAAAAGGACTAGGTTTCCCTAGCCTT 2171875 30 100.0 37 .............................. TAGACATAGGAGATGCAAGTCCTAATTCAGTTAACAG 2171808 30 100.0 37 .............................. GAACAGAAAACCAGAAGAATGGAGAGACAAAAAAACC 2171741 30 100.0 37 .............................. TAGGAGCAGATACAGCAGGAGAAGGTTCAGATTGGAA 2171674 30 100.0 37 .............................. GATGAAATGGTAGCTGATAATGAAACATACGCAAATG 2171607 30 100.0 37 .............................. AATAATGAAGCAAGAAAAGAGATGGAGAAATCTCTAA 2171540 30 100.0 37 .............................. CTTGCCTATTATAGTAATCATATTCATGCATGTGCAA 2171473 30 100.0 37 .............................. GCCTCATATACGCATTGATTAAGTGTAAGCCCTGTGT 2171406 30 100.0 37 .............................. TAGATATATAGCTGACAGAAAAGTTCCAAAGTATATT 2171339 30 100.0 37 .............................. TCCTTTCTTCCAATTCCTCATCTGTTTTAACTTTAGG 2171272 30 100.0 37 .............................. AATGATGGTATGAGCTTGCCAGCGTTGCAAAAAATAC 2171205 30 100.0 37 .............................. CACAAACAGTAGGGGTTAAAGGTGAATTTATTTTAAG 2171138 30 100.0 37 .............................. GCAAAAGGAACTATGAATTGGCAAGGTGGAATAGCCC 2171071 30 100.0 37 .............................. CAAGAAAGATGAAAGAAAGATACCCAGAGGTAGATTA 2171004 30 100.0 38 .............................. TATACAAAAAATGGGGATACTGGGACGGTGTTCCTCAT 2170936 30 100.0 36 .............................. AAGTGTCTGGAAACATATCATCTTCGTAGTCGTAGA 2170870 30 100.0 37 .............................. TAGCGTAACCACCCAACATGTTAGCGATTAATTCTGT 2170803 30 100.0 37 .............................. CCCTCCTCTAAATATTTTTCCAGTTGTTCTTCTATAA 2170736 30 100.0 37 .............................. TTCTAAATCTATAAATGGTTTAATATCTGATTATTGT 2170669 30 100.0 36 .............................. CTGATAAATTTGAAAGATATAAGGTAGAAAAGAAAC 2170603 30 100.0 37 .............................. CACTTTTTCTCACACTCTTACGCTTATAGTGTAATGA 2170536 30 100.0 37 .............................. CTTGTAAAGGAAGCGGTGGAGATATTGAGTATGATTA 2170469 30 100.0 36 .............................. GTGGCAATACAAGGAAGGATACAAAGTAGAAGCTGG 2170403 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 45 30 100.0 37 ATTTATAGACTACCTATGAGGAATTGAAAC # Left flank : CAGAAATAGCTAGAAATATGGTCACAAAATACGGTATGAGTGATAAATTTGGAATGATGGGGCTAGAATCCTCTAGTGCCCAGTATTTAGATGGAAGTAGTGTGAAAAACTACAGTGAAACTACTGGTAAAGAAATAGACGATGAAGTATTAATACTGATAAAAACTGCTTATGAAAAATCTAAACAAATATTAGTGGATAATATTGAGCTACTTGACAGAGTATCTGAAAGATTGTTAGAAGTAGAAACTATTACAGGAGAAGAGTTTAATCAAATAGTAAAAGAATATAAAGAACAAAAAAATAAGTAAACATATAAAATTGTCGTCGACCTCAGGTAGTGCAAAAATCCCTGGAGATCGACGACAATTTCATATTTTTGAGGAATGTGTAAGTTTCAATGAGCGCAGAGAAAAATTAGAGAAAGGTAACATTTAGAATCCCAAAATTTCATATTTGACAAAAAATGAGAAACATAGTAATATCAATACATAAAATTG # Right flank : GTAAAGACGTTTTCNNNNNNNNNGAAACGTGGCAATACAAGGAAGGATACAAAGTAGAAGCTGGATTTATAGACTACCTATGAGGAATTGAAACTAAAAGGAACCGTTTTTCTAGAAAAGGAACCGTTTTTATTTATAGACTACCTATGAGGAATTGAAACAATGTTAAACATATACTATAATAATAGGACTATAAAATTTATAGACTACCTATGAGGAATTGAAACAGAAGGAAAGAAAAGTTCGACGGGGAAATATATATCAATTTATAGACTACCTATGAGGAATTGAAACTGATGGTTTAATCTTATTTTACCGTCTATTACTTCAAATTTATAGACTACCTATGAGGAATTGAAACGGGACAGTTTTTATAGTCCTATTATTATAGTATATGTATTTATAGACTACCTATGAGGAATTGAAACCAAAAGTTGCATCTCCTTCATCACTCATGGCAATTAATTTATAGACTACCTATGAGGAATTGAAACGGGTTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTATAGACTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA //