Array 1 980885-981030 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKOU010000002.1 Bacteroides fragilis isolate MGYG-HGUT-01337, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ===================================== ================== 980885 24 100.0 37 ........................ AACAAAAATACTAAGTATTTGTTTGATAAGCAAGGAA 980946 24 100.0 37 ........................ GCTTTTTGTGGCTTGAGTTATGTACCTTCATCATGAA 981007 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ===================================== ================== 3 24 100.0 38 ATTCCCAATATATTGTGAATTTGA # Left flank : CGTGTCGGTATGTGCTGTAGCTAATAAAATACCAAAATCATCTTTTTCATCAATCTGCAATAATCTTGCCTGAACGATGCGGTTGTGCCCTTCTGACAGCATGTTGGCAAAAAAAGGAAATAGATAATGGGAAGTATATTCCTGTTGTTGTTTTGTCAATGTCAGGCTTATGGAGGGCTTTGATGGATCATTGAAATATTCGTCATCATAGCGAAATTTATATTCGTTAGAAGATAATTCCGTAATAATGCCTACCCGTTCTTTATTCAAGTATACGACTCCTTGTCTCATAGATGTCCCTCCTTATTTTTAATTTTCAGAGAAAGTTCTAATCCTAATACCTCCAATATGGCATAGAGCTTTTGAAAATTAATATTTATTTCTCCATTTTCAATTTTTGTTATAGTATTGATACTGATTTGTGCTAAATCGGCAAGTGTTTGCTGATTTATACCCAACATTTTTCTTCGTTGGCGAATCTGTATTCCAATTTGTTTCAT # Right flank : ATTACGGCTATTTGTACTTTTGATTTTAGAATGACAGAGATTTCTTTTTGTTTGTAGAGTGTTTCTCAATTAACATTGTTAACGCCATTTCTCCGTTATTTTATTCTTGTGTGCAAATAACAAGCCTTTTGCATTGAAAACACTTGCTATTTGCATTTAAAGAACAAGCTTTAACGTAGCGTTAAAACAAAGCTTTGGGCGAGAGAAATCTTGTGCTTTAAAAACACTGTGTTTTAGTTCGTTAAGCACACTTTTTACTTCTTTGTTTCGCTGAATCCCTTTCTGGTCAAAAGCCTGTATATTTGCTTTTTTGTCAACTACAAATAGGGGACTGACACTCTCTGCTACCTTCTTTTCGTCTTGTTTAGCGCCGCTATCAGGTATCTTCCTTTGGCTCCGATGTCGCTCCAGCAAGTGTTGGCAATCAGTTTCCATACCGTCGTTCCCTTCCTCCCATAGTCCGACAGCCTGAGTATGGAGTTTACTTCCCCGGTGTCGGT # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCCAATATATTGTGAATTTGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 2843170-2843908 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKOU010000002.1 Bacteroides fragilis isolate MGYG-HGUT-01337, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================= ================== 2843170 35 100.0 34 ................................... ATAAAAGCATTCTCAATCATAAACGGAAAACCGT 2843239 35 100.0 35 ................................... GCATTTTGGGCTTTTTCTGCTCTCTTTCTTCTTTT 2843309 35 100.0 39 ................................... TTCAACAAATCGAATATCTCCATTCTTCTTTATTTCCGA 2843383 35 100.0 33 ................................... GCTTGTTCTGTCATAATATTTCCCGATTTTGTC 2843451 35 100.0 37 ................................... AAAAATTGTTAAATAATGCTTTTCAATTTGTCTTCGA 2843523 35 100.0 35 ................................... CATTGAGGCATTCTAATTCCTCTTTGCTGAAAGGA 2843593 35 100.0 33 ................................... AACTCGGCATTGGTTAGGAATTCTTCACATTTT 2843661 35 100.0 35 ................................... AATGTTTCTCGGCCATAGTTTTCGCTCCATACTCT 2843731 35 100.0 36 ................................... AGGACGCAAGATTTTCTACTTGTTCGCGAACGAATC 2843802 35 100.0 37 ................................... TTTCCTGTCCCGGTGTGAGCTTGACGCGAACTTTCAT 2843874 35 97.1 0 ........A.......................... | ========== ====== ====== ====== =================================== ======================================= ================== 11 35 99.7 36 ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC # Left flank : TTATATATCAACCTATACGAAAAAAGATAATTAAAACCGTCGAAATAGTCTAAACCTCTTGCGAAAATCAGAATTTGTTTAATTCATTGATTTTCTGCTTATTCTTTTAAATGAAAAATAATATATAATGTATAAAAGCTACGAAAGAACTAGCTTTTTTGTATATTAGTAAATCATTTGCGAAAAAAAACAAATAAGCAATTCGTTCTTTGACATAATACAGTTATTATCTGATAATTATAAATATAAGATTAATCTTATTTTCGAAATAGGCTATAATATAACAAATGAAGCAGGCATTTGCGAATAATGAATCGATCATATCAAAGTGATAATCAATTAAATATCTCTATATTCTACAAATTATTTATTTAAATTACAGAAAAAAAGAGTACATTTGCGAAAATCAGTTCAACACTTCATCTATCTAACTGAATAATAAGTTATTATATATTTATACAGATAGAATACATATTTTATAATAATCTGATTATCAATAT # Right flank : CCAATGCCCAGAAATACTGCAAACTTTCCTTATTAGCATGTAGATGTATTCCAATATAAAAATTTAACTACATTAAATAGAATAAGGGGAGAAGTTCAGACATAACGGCTTGGATAAGATCGTCATGGACTTCGGTATTGCTTTTAACATTGGGAAAATGATCAATAAGCAGGAAAAGAAGAAGAGAGGCAGAACTAATTTATTGGTAACTATTTTAATAAGCTGTGGAATAGCTTACCAAAAATACACAAAGGCGATAATACTACGGGGCTGTCCAAAAAGCAAAGTGCCCCCCAAAAGTCGGATAGCCCCTTTTACCATTGTTTATTTCGGTGAAAAGCCTCATATTACCGTTGTGAAAAATTAACAGTAATAGTTAAGATAGTATTTAGAGAGTTAACCTCCAGCCAAAATGTTCTTTTCCGGTTCGTTTATCGGAAAAAATATCTCCCAACCATCTTGTTCGTGTTGTAAGTTACATTGTAGATGCTTTGGATATT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //