Array 1 31907-38247 **** Predicted by CRISPRDetect 2.4 *** >NZ_VLXS01000022.1 Acinetobacter baumannii strain AS012542 AS012542_22, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 31907 30 93.3 30 ............................CG AGTAAGTTGTTGCAATCGAACATCGGTCAC 31967 30 96.7 30 ............................T. GCGGATTCATAATCGATGGCAATTTTAACT 32027 30 96.7 30 .............................T CACAGGTGCTGTCAGTGGTGTCATTGATAA 32087 30 96.7 30 .............................T GGTGGTCAAATGAATCTTATTTTTTAGATC 32147 30 93.3 30 ............................TG TAACCAAGTCGAAAAAGCAACTGCACACAA 32207 30 93.3 30 ............................TT TGGAAAACCTCGAAAGTTTTCTTTTTGCAA 32267 30 93.3 30 ............................TC ACATTCAGTAAGTGAAGGGCTGCTGTAGTC 32327 30 100.0 30 .............................. TTCGTGTTGACCAGGAATTAAAAGACACTT 32387 30 93.3 30 ............................CT CAAAGTATTTAACACGGTTGTTAGCAGGAT 32447 30 96.7 30 ............................C. AAAAAGAGCTTGCATATACAGATTCTAGTA 32507 30 93.3 31 ............................TT GGTGTTGAACAATGCTTAAGTGAAATCACAA 32568 30 96.7 30 ............................T. TATCAATCTTGTTAAGAGAAGCCGCATCAT 32628 30 93.3 30 ............................GT GATGTGTATGTTCTATTAGTGGTGTAAATC 32688 30 100.0 30 .............................. TCCCGCTTAGAACTTGTAAACAAAATTCTG 32748 30 96.7 30 ............................T. GTCCCGAAATTTCAGTAGGTGGCTCATAGC 32808 30 100.0 30 .............................. CTGGATTAATGGGGTAAACAACCCAACTGG 32868 30 96.7 30 ............................T. AAGGTTCCTACTAACTACAATCCAGCAACA 32928 30 96.7 30 ............................T. ACGGTGCACGAACTGTTATTAGCGGCAAAA 32988 30 96.7 30 ............................T. CAGACCGAACACTTCTAAATAACTATGCCG 33048 30 93.3 30 ............................GT TACGTCTACGGTACGTGGTTAGCATGATTT 33108 30 93.3 30 ............................CC TGCCGTTAATTCACCGCTTGGGTGATAGAA 33168 30 93.3 30 ............................GC AGGGAAAAGTATAGCTTTAGATATATCCCA 33228 30 93.3 30 ............................TG TAAATATTCGTTTTTATTTTTTTAGGTCAT 33288 30 93.3 30 ............................TT GCTCTAAGCATTCCGAAGCAAGGAAATGTG 33348 30 96.7 31 .............................T CACATTTTGGGATGGCAATAGCATTATTTGT 33409 30 93.3 30 ............................TG ATCTTTGCAACCAAGCATTCAACGAATCCA 33469 30 100.0 31 .............................. TTTCATGCTTATGTGCTAAATTCATATTTCA 33530 30 93.3 30 ............................GT GTATTACCGTCATTTTTATGATGGTACATG 33590 30 96.7 30 .............................G TATCCGTTGCATTAATCGCTTTGGCTCAAA 33650 30 93.3 30 ............................GT GTTGTAATTTCGCTTGTATTGATCATTGCC 33710 30 96.7 30 .............................C ATACCCCATATAACGGTTATTGTAGTTGCT 33770 30 100.0 30 .............................. AGGCATACACCCAGTAGAAGATAGACAAAA 33830 30 96.7 30 .............................T ATATGTGCGTAACCGAGCAAGCTTGTCACG 33890 30 96.7 30 .............................T ACCGAAAGATGACAAAAAGCACCCTAAGGT 33950 30 100.0 30 .............................. GTGAAAAAAGCTGACAGCAAAATAAACTCA 34010 30 96.7 30 .............................C TTCATAGAAACCGGCTTTCGGAAAGTTATC 34070 30 93.3 30 ............................GT CCAAGTCTTAAAGATGTTCAATGGGCAATG 34130 30 100.0 30 .............................. TCGAATCAAAATATTAAAGAGTTACGTCAT 34190 30 96.7 30 .............................C AATAAACATTAGTGCATTGTCCATAAAGCC 34250 30 93.3 30 ............................GG GAAGAGTTATTGATATTGCAGATCCATTGT 34310 30 93.3 31 ............................TT AAGCAATCGCAAAACATTGCAGCTTTAGACC 34371 30 100.0 31 .............................. GGATTCGAGCGAGATCAGCGTCGCTTTTAGC 34432 30 100.0 30 .............................. CTGGATTAATGGGGTAAACAACCCAACTGG 34492 30 96.7 30 ............................T. ATACACCAATCCCGCTTAGAACTTGTAAAT 34552 30 93.3 30 ............................GC AATCTGGTTATCCGATTCCTATTTATTTTG 34612 30 100.0 30 .............................. ACTGCATAGATGACCATTAGAGACATCCCC 34672 30 93.3 30 ............................GT AGTGGGGACATTGTGTACGCTCATGATGTT 34732 30 93.3 30 ............................TC ATGCCAGTTGCAAAGTCCAAGCCCACTGCT 34792 30 96.7 30 ............................T. CTAACTGTAAAACAGAAGACTTGCCAACTT 34852 30 93.3 30 ............................GG TTTAAGTCCCCGAACATTACATAAGTAAAT 34912 30 100.0 30 .............................. TGGCATTTGCTGCTGACGGGGATTTCGACT 34972 30 100.0 30 .............................. ATCAAAATCGTGGCAGATAACAAAGCGATC 35032 30 96.7 31 ............................T. ATCTCGGTATTTACGCCAAGGGCGCTATTCA 35093 30 96.7 30 .............................T GATCTACCCTTTGAGCTAGATAAAACTTTT 35153 30 93.3 30 ............................TT CACGTGGTACGCGCTGTAAGCCTGTTTGTT 35213 30 93.3 30 ............................TG AGTATCGCAAATCAAACATTGCCAAGCTTT 35273 30 93.3 30 ............................TT AGATAAAGCAGGGGATAAAGGGACGTTAGC 35333 30 93.3 30 ............................TG TAATACTAGAATCTGTATATGCCAGCTCTT 35393 30 96.7 30 ............................C. TTTTGCGACGCGCTGCATCGTTTAGGGATA 35453 30 93.3 30 ............................GT GTCGGGTAAAACAAGGGTAATGACTTGTGT 35513 30 93.3 30 ............................TC TACAAAGGCAATCTGGCTCTTCAATTCGTG 35573 30 93.3 30 ............................TG ATTGCGGACATTTAGTCTGCTGTATTTCTT 35633 30 96.7 30 .............................T CGTGATCAAACCACATGCCTTCATCTTCAT 35693 30 96.7 30 .............................C TTTAAGCGCAAACGAACAGCATCAAGATCA 35753 30 93.3 30 ............................TG TTTCATCTGTCTTGATAGCTTCCCCCATAA 35813 30 96.7 30 ............................C. CTACGGACATAATCGAACATTTCCTGAAGT 35873 30 93.3 30 ............................TT GTGCGAGTGTCTACGAGCCAAGCCGAAATA 35933 30 96.7 30 .............................G TTGCTACTGAATTAGTTGTTATTGCTAAAA 35993 30 93.3 30 ............................TT AGGCTGTGCTAGGTATTCGTCTGGTTCCAT 36053 30 96.7 30 .............................T TAATATAGCTTCTTCCAACTACAATATATT 36113 30 96.7 30 ............................T. TTTGCTACGCCACCAGCCATACCTAGAAGC 36173 30 96.7 30 .............................G CCTGCCATAAAAGGCACAGCCGAATTTTAC 36233 30 100.0 30 .............................. CGTCAATTCAAACGTAAAAAGCTACTGAAG 36293 30 93.3 30 ............................GT CAGTATTACTCCACACTTTTTATATTTCAC 36353 30 96.7 30 ............................C. GCTAATAAATTTACAAGAATCTGATGTGTA 36413 30 100.0 30 .............................. CTGAAGTGAAAATTGTTCATTAATGGTTAT 36473 30 93.3 30 ............................TC ATAGTTAATATAAATTTATTATGACAAAAA 36533 30 93.3 30 ............................TT AGCCGTTTGGACTTTACCAATCTATATTTA 36593 30 96.7 30 .............................G CAATATCAATTACAGGAATACCACCAGCAT 36653 30 100.0 30 .............................. TAGAATTAAAACCACGTTGATAATATAGGT 36713 30 96.7 30 ............................G. ATTGCACTTGCTAAGCCAATAATGCCAACT 36773 30 93.3 30 ............................TG ATGCGGGTTGTCCACCAGTTATGACTACTT 36833 30 93.3 30 ............................CC AAGCTGTGAATGTTGGTAATGCTTTAAGCG 36893 30 93.3 30 ............................CG TCAAAACAATCAAAAAAGCAATGAGTACAA 36953 30 96.7 30 .............................G TGAATGGGATTTATTCGCAAGGTGATATTA 37013 30 100.0 31 .............................. AAAGTTTTTTTGACAATCAAGCCGGCAAGTT 37074 30 93.3 31 ............................TG CATCGAAGTCATAGAACGCTTTGAGTTTCCA 37135 30 96.7 31 .............................G CGACTTTGAATTGATGCCATCTCCGCCTTTA 37196 30 96.7 30 ............................T. TTCAGATTGGCTGCGGCCTCACCTGTAGCA 37256 30 93.3 30 ............................GC AAGTGTCACCTTTAAGTGCACGGAAGAAAT 37316 30 93.3 30 ............................TC CATTCTCGCTAAGTGGCATCACACGCGATG 37376 30 93.3 30 ............................TT GGTTGTTTAGTAAGTTCAAAGCCCGTTGTA 37436 30 96.7 30 ............................C. ATGGATTTAAAGATTTCAACCGCTTGGGAG 37496 30 96.7 30 .............................T CATCGAAATTTAGTTCTAATTCTTTAATTT 37556 30 93.3 30 ............................TC ACTTCTCTTAATTAGTGCTGAAGAATCAAA 37616 30 93.3 31 ............................CT GAATAAGTGAGATGTCTCTATGAGTTCAATT 37677 30 96.7 30 .............................T TGAATTAATACGGCTTACTGCAATTGGTTG 37737 30 96.7 30 .............................G TCTTTAATGTCGGCAACATGCTGTGCAAAA 37797 30 93.3 31 ............................GT AAAAAAGAACATTTCCAGCAAAAATTGACGA 37858 30 93.3 30 ............................TT GCTGCCTGCAAACTTGTTTGGGGCTTTATG 37918 30 96.7 30 .............................C TGGAATTCAGCAGTAAATAAGGGGTTAAGA 37978 30 93.3 30 ............................TT TAAAGCTAAATGAGGGTTAAACCTAAGAAA 38038 30 96.7 30 .......T...................... CGTGAACAATTGTTTTAGCTTTGAACATTA 38098 30 86.7 30 .............C...T..........GT TACTGGGTTGCGGAATATATTCGCAATTAT 38158 30 86.7 30 A......A.........T...........T TTTGATCTTTACTTATTCTCGCTTCAAACA 38218 30 66.7 0 .......A...T.....T..C...AGCGTT | ========== ====== ====== ====== ============================== =============================== ================== 106 30 95.2 30 GTTCATGGCGGCATACGCCATTTAGAAAAA # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.17, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //