Array 1 719-31 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKUF01000266.1 Acinetobacter bereziniae strain TUM15449 sequence266, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 718 28 100.0 32 ............................ TATTTATATATGCGAGATTGCAAGAGGTATGA 658 28 100.0 32 ............................ TAAATGTGGTGGCATGTTAGCTTTTATTTGAT 598 28 100.0 32 ............................ TAAATGTGGTGGCATGTTAGCTTTTATTTGAT 538 28 100.0 32 ............................ TTATGAAGGTAATCTTTATAGAAATGCTAGAC 478 28 100.0 32 ............................ TGCGACACCTAATCGAATCATACTTGCAACTG 418 28 100.0 32 ............................ ATGACTTGAGCGCCAAAACCATTAAAAGTCAA 358 28 96.4 32 A........................... TTGCTTTCAATGTCATCTGCAAAATAATCCAT 298 28 100.0 32 ............................ AAAACAGCATTAGAGCCAGCATTTTCAGCAGA 238 28 100.0 32 ............................ CTTGTAATTAAGCTAATGAATAGCTTAACGAT 178 28 100.0 32 ............................ TTTTAAGTTTTGCGCACCGATCAAAAATGCTT 118 28 100.0 32 ............................ AACCGCAGGAAAGCCCCAATCCAACTTGATAC 58 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 12 28 99.7 32 GTTCGTCATCGCATAGATGATTTAGAAA # Left flank : GCGCTGGGCGAAAACATTATATAAACAACTTGCTAAAGGATTTGGAATTGAATTTATCCGCGATGAAGGAAAAAATTCTCACGATACTATTACAGATATAGCCAACAATTACCTAGATCATGGAAATTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGGATTAGCTTTGCTCTACCTATATTACATGGCAAAACACGCCGAGGAGGCTTAGTTTTTGATCTCGCGGATCTAGTCAAAGATGCTATCGTGATGCCTATAGCCTTTATATGCGCAAGCAAGGGTTTAAATCAAAAAGAATTTCGAATGCGACTCATCGAGACTTGCCAAGATCAAGATATTTTAGATTATATGTTTAGCTTCATTACTGAAATATGTAGTAAAATTAAATAAAATCAATATCTTAAAAACAACTCTTCTCTACGAAGTATTTTTACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : ATGAATTTTTAAAGCAAAGAATACATCTTGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 4675-4227 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKUF01000323.1 Acinetobacter bereziniae strain TUM15449 sequence323, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 4674 28 100.0 32 ............................ TTCATTATTCTGTGCTAATCCTTATATGCAAT 4614 28 100.0 32 ............................ CGTTGGCACGTCCCGCAAAGATTGGATCAGCA 4554 28 100.0 32 ............................ CAAATGAACGAGAGCTAACTATTTGCTTCTTA 4494 28 100.0 32 ............................ TAAGTTATTGATTTATTTACACATTATACATT 4434 28 100.0 32 ............................ AGTAGAAGAAACAGAAGATTTATTTTTTGAGA 4374 28 96.4 32 ....A....................... TAACCCTGCCTTTTAATTAAGACAGGGTTTTT 4314 28 100.0 32 ............................ GGCAACATCCACTTATTGTTATTGGTGTCGCC 4254 28 85.7 0 ............C............CCT | ========== ====== ====== ====== ============================ ================================ ================== 8 28 97.8 32 GTTCGTCATCGCATAGATGATTTAGAAA # Left flank : GAATATCTCTGAA # Right flank : ATCTAGAAACAGTAAAAACATTGTAATGAAAATTAACTCATCACATCATCCAATACTTTTACCATTAAAATTCTCTTGTATTTATTTTTAAGAGTCAATTTAGACTCCACTCAAATATCAAACAAATCATAAAAAAATCCCCGCACAATGGCGGGGATTTTTTTATGATCTGAGATCAGAATGACTTACATCATTCCGCCCATACCACCCATTCCGCCCATATCAGGCATAGCAGGTTTATCTTCAGGAATATCTGTGATCATGCATTCAGTTGTTAACATTAAACCAGCAACAGAAGCAGCATGTTCAAGTGCAGAACGTGTTACTTTTGCAGGATCAAGGATACCCATTTCTAACATGTCGCCATATTGTGAAGTCGCAGCGTTGTAACCAAAGTTACCTTCGCCATTTTTCACAGCATTGATTACTACAGAAGGCTCATCGCCTGCGTTAGAAACGATTTGACGAAGTGGTGCTTCAATCGCACGACGAAGGATATT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-15.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 767-18 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKUF01000766.1 Acinetobacter bereziniae strain TUM15449 sequence766, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 766 28 100.0 32 ............................ TTAATGGCAACTGCAACACAAAACACACTAGC 706 28 100.0 32 ............................ TTTACCGCCACCGTTATTCGGGTCATTAGGAT 646 28 100.0 32 ............................ CATGATTAATCACCTTTTTATTTGGCTGCAGC 586 28 100.0 32 ............................ TACGAGGAAATGGATCGAGCGGCTCAGTCTCA 526 28 100.0 32 ............................ AATATTTTGAAATGTAATACCTGAAAATAAGT 466 28 100.0 32 ............................ AGTTTCAATTTGCACTTCATCTGCAGTTTGTT 406 28 100.0 32 ............................ ATTCATGAAAGCTAAAGTACAGCCCCAAAACC 346 28 100.0 32 ............................ ATTGAAGAAAGGCTTGAAATTGTCAACTGGAT 286 28 100.0 32 ............................ GCTAATTTGCACAAGGTATTATTCATTACTGA 226 28 100.0 32 ............................ TGTGTGCATTGGCATTGGTAGATCAAAGACTG 166 28 100.0 32 ............................ GGACATTTGGATGATGATTGGTTCAGGTTTAA 106 28 100.0 33 ............................ TATAGTATATAAAAAATTCTATCACCCCCAAAT 45 28 96.4 0 .....................C...... | ========== ====== ====== ====== ============================ ================================= ================== 13 28 99.7 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : TTATATTGGTAAGTAAAAACTTGGATCATTTGATGATTTTTAGATTTAACTTACTGTTATCACTTTATTTTTTGATCTAAAATTAT # Right flank : AAATTGTTAAACCTCTCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 256-705 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKUF01000798.1 Acinetobacter bereziniae strain TUM15449 sequence798, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 256 28 100.0 32 ............................ AATAAAAGTGGCCACATTGGAGTGAATTGGCA 316 28 100.0 33 ............................ CTCGAAAAAATCCACGCGTTTGATGATGCTCAT 377 28 100.0 32 ............................ TTGAAATAAGTTCCTAACAGAAATTCTTACTT 437 28 100.0 32 ............................ TTTGCGAAAAATCAAAAGTTGGCGACCACTAT 497 28 100.0 32 ............................ ACGAATAGAAATAAATCAAAACAACACAAATC 557 28 96.4 32 .................C.......... ACTCTTGAGCCATTTGGATATTCAATCGTTTG 617 28 92.9 33 ................C.......A... AACTACGAGCTGATAAGTGGATAGACATATCAC 678 28 75.0 0 ........A..T...AA.CC....A... | ========== ====== ====== ====== ============================ ================================= ================== 8 28 95.5 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : GGATAAAGTAAATGAATGACATTAAAAATATGTGTGAATATTGGAAAATCTTTTACTGATAAGATAAAAGTAGTTGATTTTGAATATAGGCTTAGTTAATCAAACAAATATTCTAAAAATTTCCCCCAATATTTTTTAACTCTTTAACAACTGAATAAAATCAACAAGTTATAATTGTAAGTAAAAATTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATTGTTTTATTTTTTGTTTTAAAATTACAG # Right flank : TATAAACGCATTAACATCTTA # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //