Array 1 335819-338363 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACCIU010000002.1 Lactobacillus sp. Sy-1 contig_2_pilon, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 335819 36 97.2 30 A................................... CCAATAATCATCTTCGGGAATGTGCTTTTG 335885 36 100.0 30 .................................... AAGCAGTCCATCGGATCATCACCGTCTTGC 335951 36 100.0 30 .................................... TACGATGCGCTCAAGTCTATCGTCAAGGAC 336017 36 100.0 30 .................................... TGTGCATATAACGCGAGCCATCGGCATCAT 336083 36 100.0 30 .................................... TTACTGACCCGAACAAGGAAGGTGATGGTT 336149 36 100.0 30 .................................... TTATACAACGGTCTATCCGTTGACGTTAAG 336215 36 100.0 30 .................................... ATTTCGAGTTTTAGAAAGTTCAGATTTCAT 336281 36 100.0 30 .................................... ATCTCTTCATCATACGGGCAACGCCATTAT 336347 36 100.0 30 .................................... TTACCGCCTACTTGCATTTCGTAATTGGTT 336413 36 100.0 30 .................................... GAAAACATGCGTTTAAAAAATGCAATTAAG 336479 36 100.0 30 .................................... TAGCGTTTAAATTCATTGATGATTACATCT 336545 36 100.0 30 .................................... TTAGCATTACCACCCTTCATCGTAACGTTA 336611 36 100.0 30 .................................... TGTCAAAGCCTGACCGATTACGCATGTTAG 336677 36 100.0 30 .................................... ATGATGCCATGGTCGTTGGTGTATATTGCA 336743 36 100.0 30 .................................... TGGCACTGTTGAAGATACGCCAATGGGCAG 336809 36 100.0 30 .................................... TCTTAGATGACGGTAAAGGCAACGTGACCA 336875 36 100.0 30 .................................... CCGTGGTGGGTTCATCTTCTTGAAAGGAAG 336941 36 100.0 31 .................................... CTCGTATATTGATTGAAGTCGGTAAAATTAT 337008 36 100.0 30 .................................... GGATAAAGTGCCCACTAAGCTGTTAGTTTT 337074 36 100.0 30 .................................... CAAGCGTCTACTGAAAAGAAATCGGCTTCA 337140 36 100.0 30 .................................... TTCCTTTTTTTCATGTGGGATAAAATCAGT 337206 36 100.0 30 .................................... ATATTGTTCAAAGTAGAACCAAACAACAGC 337272 36 100.0 30 .................................... AGCGAAAGGCAGCGGCAACACTGTAATTCT 337338 36 100.0 30 .................................... ACACAAGCGATTGGATTGCTACATTATCGC 337404 36 100.0 30 .................................... TGTCGTTGAGCATATCAGTCAGGACTTTAT 337470 36 100.0 30 .................................... TACTTGTGCCAGACTTCTTCGAGTCCTTGG 337536 36 100.0 30 .................................... TGTGATTACCTTCTAACGTAGCGACAATAA 337602 36 100.0 30 .................................... CTTAGCTAAGTTAGCTTTGCCTTTGATGAA 337668 36 100.0 30 .................................... TGGAACTGGAACTGCCACTATCTATAACGT 337734 36 100.0 30 .................................... AGATAGTGAAGGCAACTGGCAGCTAGAAAG 337800 36 100.0 30 .................................... ACCATTATTTATCAATTATGTAATGCAAGG 337866 36 100.0 30 .................................... TAGAAGTAGTGGAATACCTCTAAGAGCTAC 337932 36 100.0 30 .................................... AGAAATTAAAGCCTTGAAAGAAACATTAGC 337998 36 100.0 30 .................................... CGAATTTATCGCTGCAATTGCTAAGTTAAT 338064 36 100.0 30 .................................... ACAGCGCACGCTGAAATCATGGATTTGTTT 338130 36 100.0 30 .................................... TAATATCTCTGAACTTCCAGTATGAATAAT 338196 36 100.0 30 .................................... GCAAAATGCGGATACGGATACGCAGAATGC 338262 36 100.0 30 .................................... CTAATTAAATTATTAAAGTTGCTAATCAGT 338328 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 39 36 99.9 30 GATCTTAAACTCATTGAAACAACCTGCATCTAAAAC # Left flank : AGGGAATCGGGATTATTTTGAATGTTAAATATGTAGAAGTAATAATCTCTTTAGGAGGAACATGTTCATGGACAATCGTATCAGTTGTGATTCTATTCAGCAGATTGATAATATCGATAATAAGAGCACCTAAAAAACTGATTAGGAAAGAAATTGAAAGCCCCGAAGATTGCAGCTGAAATGAAACCTGGTCAAAAGTGCATTAAAACAATATAAGGGATTGGTAATGATGCAGTCTCGGAATTATTAGCGTTATCCCCAGTTGATGAAGTTTCAACTGGAGTTCAAAATAGTCGTATTTACAGAAGTAGCAATGATTAATATGTTGTTAAAAAAAGATATATAAATGCAAGTAAATAAGGATTAGAGGGCGTTGGAGGCCCTCTAATCCTTATTTTTATCTAAAACGTTATTGAAAAAGTGCGTATAAAACTATTGATCTAACATACTTTGGAATTTAAAAATACAAAAATAATTAAAGTGATTTCCATTTAGAATTA # Right flank : CCATTATATTATAATAAAACATACAATAATTTCAAACAAATGCTGTCAAAACAAGTTTTTCAATCATTAAAAAATTAACTTATTTCTAATATCTAAACTCATCGATAATTATACTATAAAATGAACTTTCATTTCTATTTCCATTCACAAAAATCTTCGTCAATAAATAAATAATTATAATTATCAGTCAATGATCTTCTCACACTATTAAAATTAAAAGTTAGAATTGTCTTCTTACAGTCAGCTAATAGTTGATTAGTTAATTTTAATTCTGAATCATTCAAGTAATTGGTTAAATTTAATAAAATAATTAATTTATCGTCTTGGAGACTAGTAACCGTCTTTACTAAGGTTTCCAAAATTGGATATGGTTCATTTAATTCATCATGAATAAATGATAACTTAGATTGTTTTAACAATTTATCTACATTCGGTGTAAAGTTCATTCTAATGGGTAAATCCAAAAGATAGGCTTCTTGTAGAAAAATTGAAAACATTTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATCTTAAACTCATTGAAACAACCTGCATCTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : NA //