Array 1 3756-4650 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBCF01000156.1 Calditerricola satsumensis JCM 14719, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 3756 30 100.0 36 .............................. AAAAAGGCCTATCCGAGCCTCGCATCCTCACCGCTC 3822 30 100.0 36 .............................. AGTGGGTGGAGCCAAAGAACACGAGCCGTACCTGCC 3888 30 100.0 37 .............................. ACTGCTGGTGTGGTTAACAACAAAATGTATGCAGTAG 3955 30 100.0 36 .............................. GCTCCGGACTCGGTTCCGGCGCAGGATTCGGATTCG 4021 30 100.0 36 .............................. CCGTTGCTGGGCTGTTTTATCTCGTTGGATTGTGGT 4087 30 100.0 36 .............................. TCGGTCGTCCACCCACGCCACGCCATTCAAGCCGTC 4153 30 100.0 38 .............................. TCTCGCGCGCCGCCAAACGCTATCTCGCGTACAAGAAC 4221 30 100.0 36 .............................. CGATATGCTGTACCAATTGCAACGCTCGAAAGACGA 4287 30 100.0 37 .............................. TCGCCTTTCCGCAATCGTTCCGGCCTCATCTGCGCCT 4354 30 100.0 37 .............................. ACCGGTGTCTGTGTGATACTGGTCCGGTGTCTGTGAG 4421 30 100.0 35 .............................. TCGATGATTGAGACGCTGGCCGCATTGCCGGTTGT 4486 30 100.0 38 .............................. TGCGCAGCTCATAAGTCTTCGCGTAGCGCTCACCTCGT 4554 30 100.0 37 .............................. AATCAAAAAGAAAAGCCCTTTAAAGGGCTTTTTGAAA 4621 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 14 30 100.0 37 GTTTGGAGCCTACCTATGAGGAATTGGAAC # Left flank : CCCCTTTGTCAGCCGGTGGTGAATGCTCGTGTACGTGATCTTGGTGTACGATGTCGATGTCAAGCGCGTGGCCAAAGTGCTCAAAATCGCCCGTCGGTACTTGACTTGGGTACAAAATTCGGTCCTCGAAGGAGAGCTGACTCCCAGCCAGTACTTCCAACTCAAAAATGAGCTCCGGCGTGTGGCCAATCTCAACGAGGATTCGTTTATTTTTTACGTCATGCGTACCAGCCGCTACAGCGAACGCGAAATCATGGGCGTACAAAAAGGCGGATGGGAGACCATTTTGTGAGGTTCCGAATGCGCATCGCAACTTCTCTGCACTTGGTGTCGTCGACCTCCAGTGCTGCAAAAATGCCAGGGGTCGACGACACCCATTTTTTGTCTCTCCTCGCCATTTTCCTCTTGCCTGCGGACCTTCCGTTCATGTACAATGATTTCGAAAGCTTTGGCATGGTGCCCGGTGCCCTTAAGAGGGTGCTAGCATCGCGATTTTTTGG # Right flank : AAACGGCGTTCCTCAACTTCGTTGCCACGCTGTTCGGCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGGAGCCTACCTATGAGGAATTGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [45.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 1 543-66 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBCF01000023.1 Calditerricola satsumensis JCM 14719, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 542 37 100.0 37 ..................................... TAGTAACTCCGCCGCTATGTAAATCAGCCCGTCCAGC 468 37 100.0 38 ..................................... TTCAGGGGTGGGATACATGGACCCCTCCCAGGAAGCAC 393 37 100.0 36 ..................................... ACTTCCATACACCAACAGGGCCACCAAAACGCCGCT 320 37 100.0 36 ..................................... CGTCTTTAGGGCCTGGCATGCCAGCGCCAGGGCCAT 247 37 100.0 37 ..................................... TTACGCCGCATGGCAGAGCAACTTCGGCGGCATCCGT 173 37 100.0 34 ..................................... CTCCGTTTTTATCCGTCACCGTCAGGCCATCGCC 102 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 7 37 100.0 36 GTTGCAGAGAGTTGACTCGTTGCAAGAGGATTGAAAG # Left flank : ACGTCCTGACCAAGGAGGAAGGCGGTCGCCACACGCCGTTCTTCAACGGCTACCGTCCGCAGTTCTACTTCCGCACGACGGACGTCACGGGCACGATCAAGCTGCCGGAAGGCGTGGAAATGGTCATGCCCGGCGACAACGTCAACTTTGAAGTGGAACTGATCGCCCCGATCGCCCTCGAAAACGGGACGCGCTTCGCCATCCGCGAAGGCGGCCGCACGGTCGGCGCGGGCGTCGTGACGGAGATCATCGAGTAATTCGCGTGGGGACAGCTGCGCGACAAAACCCCCGGCCCAACGAATGGGTCGGGGGTTTTCTCATGTGCGCGGGTTTAACCAGTAGGAAATGTAAACCAGAGGAACCCATACGGTTGACGGAATTTCGTGGCCGCCCCCTGATTCTGTGCAAAGGCGTGATTTTCGAAAAATCTGTTGGCATAAATGGGATGCATATGGTAAAATCACAGACAGGACAAGCCGTTTCCGCTCCAACCCGAATCG # Right flank : GGTAGATCGAAAGTATCTACGTGATCTCGTGGAACGGGTGGTTGCAGAGAGTTGACTCGTTGCAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGAGAGTTGACTCGTTGCAAGAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.10,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA // Array 1 5858-2607 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBCF01000111.1 Calditerricola satsumensis JCM 14719, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 5857 30 100.0 36 .............................. AATGAACTCCTCATCATCCTGATCGCCAATGAGAAT 5791 30 100.0 38 .............................. GCACTGGCGATGGCGCGGGAGCACGGCGCCAAACGGAT 5723 30 100.0 38 .............................. GGGCAGCTTCAAGTCTTCGGAGCGGCCCACGGGAGTGG 5655 30 100.0 37 .............................. CGCGGAAATGCCTCTCTCAGCCGTTTTTGGTGCGGGG 5588 30 100.0 39 .............................. TGAGCGTGCGGATCGTGTTTTCGCTCACGTTCCAAAGTT 5519 30 100.0 36 .............................. TCGGCGGAAGTCGGGAGGATTACTGGAACGATAGCG 5453 30 100.0 37 .............................. GCGTATTTTTTGTTTACGGCAGGCTTATTCGCAGGAA 5386 30 100.0 36 .............................. AGCGACAAAAATCGACGAGACGGTCTTGCTGAGCCC 5320 30 100.0 38 .............................. GGACGTGGTGTCGTAAATCTCCGTGGCCGATTTGAACA 5252 30 100.0 37 .............................. CAACCTTGACAAGCTGGACATCATCGGTGATCCCCAG 5185 30 100.0 37 .............................. GCAACAGACGGTGAGGACGGTGTCGAGGCCGACCGGC 5118 30 100.0 37 .............................. CCGTCCTGTACGACGACATTCCGGCAGAGGATATCAT 5051 30 100.0 37 .............................. TCGTCGGCCGGACCGCCTCAATGTACGCGTTCCCGGC 4984 30 100.0 38 .............................. AATGGTCATGACCGCCCGGTAGACGTAGATGTTCCCCT 4916 30 100.0 34 .............................. ACGAAGTTTATCATCGGCCGCTACTTTGTATACT 4852 30 100.0 36 .............................. CCAATGAGCCGGGCTTTTTGTTGCCCTTGTTTGGGG 4786 30 100.0 38 .............................. GATACATAGTCCACGACGACGAAGAACACCAGTGCAGT 4718 30 100.0 38 .............................. TCATCACAACCCCTCCCTCAGTTTTTTGGCTTCAAACG 4650 30 100.0 37 .............................. GCTCCCTTCAGGTGGAGACGGACATGCGGGAGCCGAT 4583 30 100.0 41 .............................. CGGGGGAAAAGACGGGTGCGCCGGTCTGCCGGACGGCGGAC 4512 30 100.0 36 .............................. ATTGCTCGTCGGTGTCCTCCCGAAACTCCACCTCGT 4446 30 100.0 36 .............................. GCGGACGGCCTCGCGGGCCCCCTCTTCGCCGTCTTC 4380 30 100.0 36 .............................. CGGATGGGCTGGCATCGGGTATAACTACTGGGTCAG 4314 30 100.0 38 .............................. GGTAATACCGACTCCCTTTTGCTTCTGCGCAACCTTAA 4246 30 100.0 37 .............................. CGATTCAGCAAATCGCCTTCATGTACCAGCAGGGGCA 4179 30 100.0 38 .............................. GATCGAGCGTCTATGGGATCGGTACCATGCTCTAGATC 4111 30 100.0 35 .............................. GGGCCGACCCTGCGCTCGCGGTCCGAGGCGACCGG 4046 30 100.0 35 .............................. GGGAATGCCACGCGAGCGCAGGAGGCGATACGTGT 3981 30 100.0 37 .............................. CCGAAATGTCGTTTGCTGAAGCAATGCGTTGGTGGTC 3914 30 100.0 36 .............................. CGTACACCTCGGTGTAGTTCGGAACCCCGGCCAGCT 3848 30 100.0 36 .............................. AGGGTGACGCGTGATGGCGAACCCCTACGGCTCCGA 3782 30 100.0 36 .............................. CAAAAAAACGAACTAGGAGGGAGACAACATGACCAT 3716 30 100.0 38 .............................. AAGCTCTGGCGCTTTGCTGGGCTTGCGGTTATCGACGG 3648 30 100.0 37 .............................. TGCCCACGCCCGATTTTGTTTTCACGTAGTGAAAACA 3581 30 100.0 39 .............................. GTCGATGACGTTCTGCCCGAACACCTCGATGATGTCCGG 3512 30 100.0 38 .............................. GAGGAGAAGAGCGCCCCACGCGGCGCTTTTTCTTGCGC 3444 30 100.0 39 .............................. TCGTGATACGGTTGGTATTCCCAGTACCATTGAAGTAGC 3375 30 100.0 37 .............................. CTTCGCACGTGCTGCCTCGAACAGCTCGTCCATCGTG 3308 30 100.0 38 .............................. ACCCGCGGAGGGGGCGGTATGGCGCGGTTTTCCATGAT 3240 30 100.0 36 .............................. GCATTAGCCTCGGCCTCCTCACCCTCACCTTCAACC 3174 30 100.0 37 .............................. TCTCCTATCCGACGTATTGACCGCCTTGTCGTCTAAC 3107 30 100.0 36 .............................. CTATGCCGTGTACGCCCAGACGGGTGTCCTTCGGCG 3041 30 100.0 39 .............................. GATACGCGTAACGTTGAACTCACTTACGACGCTAACGGG 2972 30 100.0 37 .............................. TAGTGAAAGGTGGTGTTGGTTATGCCCCGTTTGAAGG 2905 29 96.7 39 .....................-........ TTTCGCCCGGCTTTCCAGCCGTTGGGTGGGTCGTCGCGT 2837 30 100.0 37 .............................. GCGCCACGGAGCAGGCGTTAGCTGACGCGAAGAAGAT 2770 30 100.0 37 .............................. AATATCATCGCGAAAGAGGCGGCCAGTACCAAAGACA 2703 30 100.0 37 .............................. CAAGAGGCATGGTTCTCGCGGCTTGATTCGAAAACAG 2636 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================= ================== 49 30 99.9 37 GTTCCAATCCCTCATAGGTAGGCTCCAAAC # Left flank : CATAGGTAGGCTCCAAACTGTACGGGGCAAACGCGAAGGCGCGAAAATTGTCCCGCG # Right flank : CCCAAAAACCTTGCCCCAACAAGGGGATAAGTGTGAGCGCGAAGCTCGCAAAATCTTACGAAAGTATTGTACACCACTGAAGACCGCGCCGCAAGAGGGCTTTTTGGAGAAAGGATTTTGCAGAAGTGTCGTCGACCTGCCGGAGTTTTTGCAACACTGCCGGTCGACGACACAAAAACAAGCGACCCGCCATTGCCTGCGGCGGATCGCCGCGCGTAGGAACCGTGGAACAGGGGAATTCCGCTTTACAACCCCATCTCTTCCGCCACTTTCGCTTCCCATTCGTACGTCTCCGGTGTGAAGTACTCGACGCGCGTCTTCTTGTACTCCTTCGTGGAGTAGAGCACGATCCGGTCGGTGATGCCCGTCTCCTCCTCAATCGATTTCAGGATGGCCTCACATTCCTCCAGCGAGCGGCCGTGGACCATGGTGAAGATGTTGTAGGGCCAGTCCTCGTAGCGCGGGCGCAGGTAGCAGTGGCTGACGGCCTTGAAGGCGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATCCCTCATAGGTAGGCTCCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.70,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 2611-40 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBCF01000273.1 Calditerricola satsumensis JCM 14719, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 2610 30 100.0 36 .............................. TGCGCTTTAGAGGAATGTCCCAATGAGGATGAGCTA 2544 30 100.0 36 .............................. CTTTGGTCGCCGCATTGTACCATCCGTCGCCAAAAA 2478 30 100.0 36 .............................. AAGTGTCGTCCCATTTCAGCCCTCCTTCTTGCTTTC 2412 30 100.0 38 .............................. TCGCTTCATCTTCTGTTTTATGGTAGGTAACAATAAAG 2344 30 100.0 37 .............................. GCCGCTATTTCCGCAATGGTCAGCCACTCGCCCTCCT 2277 30 100.0 35 .............................. ATGCGACGCTAACGGTTGCGAGCCTGTCGGACATC 2212 30 100.0 36 .............................. CCGGAACGGCGCAGACCAATGACCAGGCCGACGACC 2146 30 100.0 36 .............................. GTGATTTGATATGCTTTATTGATGCTTTAAGGGTGA 2080 30 100.0 38 .............................. CTGCACAATCTCGATTACCCTACGCGCTGGGAGATTGG 2012 30 100.0 37 .............................. TGCATGTCCTCGCTGAATTCGTGGATGGCGTAGTAGA 1945 29 96.7 37 ........-..................... TGCGACGTGGAGATGCTGAGATGAATTTCGCATACAA 1879 30 100.0 39 .............................. AAGCTTTAGAGACAATTCAATGGGTAGAAAGTGCATTCC 1810 30 100.0 37 .............................. TTCGTATTGGGTGGCCCGTAGCATATGATGCCGGGCA 1743 30 100.0 38 .............................. AACAGAACACCTGCTTCATCGAAAATAAGCAGGCATTG 1675 30 100.0 37 .............................. CCATTTCTGGTTACAAGTCTTACACAATCGGGATCTG 1608 30 100.0 37 .............................. CCACATCGCTCGAACGAGCGATGAAAGACTGGGCCTA 1541 30 100.0 38 .............................. AGGCCGTAGCAAGCTTCCGCAGCACACGATCCTTAAGG 1473 30 100.0 37 .............................. CTCCGGTCTCAATTTGGTGTACGCGTAGTAGCGGCCG 1406 30 100.0 37 .............................. CACGCCTATTTATCGCCGCGTCGAGAACCGCAATTTC 1339 30 100.0 38 .............................. GAGACGCAATCAATGCCTATGAAGCGAAACGGGGGTGA 1271 30 100.0 37 .............................. TCGTGGGCCGCCTCGCCTGCATTCATTTCCCGCACCG 1204 30 100.0 36 .............................. TGACACCGCACGCTGTTCGTCAATTTCAGCAGCGTG 1138 30 100.0 36 .............................. TTGGAGGAGAGAGACGTCTAATACTTCCATTTTTTG 1072 30 100.0 37 .............................. ACCGCATTTTCGCTGTCATGGCCCTAGCCAAGCAACA 1005 30 100.0 37 .............................. TTAAAAGCTGCGCGAAACGGGCGATGGACCTTGGGGA 938 30 100.0 37 .............................. CGTTCACGCGGCATCCCCGCGCGAAGCGCGTACGAGA 871 30 100.0 38 .............................. GGTAGACGTTAGCCCCTTTGGGCAGGTCGGTTTGGCTA 803 30 100.0 36 .............................. CCGGTGATTCGTACTGGTACATGCCGCAGGAGGCCG 737 30 100.0 36 .............................. ACCTGTCGGCGCTGTCGGGGTTCGAGCACGAGAGCT 671 30 100.0 37 .............................. TACACTCGCAACGATACCATTTCAACCCCCTTCCCGA 604 30 100.0 36 .............................. TCCCCTTTCCAAAAAGTCTTAGCGACGCCGGGGATC 538 30 100.0 37 .............................. CCGCCGGGTGGTCATCGGTAATCACCACCGGATACGT 471 30 100.0 37 .............................. GCAGCCTCCGGGAGGGCGAAAACCTCCCGGAGCAAAG 404 30 100.0 38 .............................. CGGCAAGGAAGCCAGCAACTATACGAAAAGCCAATTAA 336 30 100.0 38 .............................. TTGGACAAGGACTCGAACCGTGGGAAGTGGCGCGCCGT 268 30 100.0 37 .............................. CCGTTCCCACCACTTGCGGTACTTAGCTCGCTTTTTC 201 30 100.0 36 .............................. ATCGGGCACAGAGATGGTTCTACACAGCGAAAGCTA 135 30 100.0 36 .............................. CCGATCCGAAGGCGGTGGTGGGCAAGAGCGTCAAAG 69 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 39 30 99.9 37 GTTTGGAGCCTACCTATGAGGAATTGGAAC # Left flank : AACATCCTACAGGGGATGATACACGATGATTTTTGCGCG # Right flank : CAGGTCGAGGAGCTTCCGCCGAGCGAGCGCGGAGCCGGCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGGAGCCTACCTATGAGGAATTGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [15.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 1 2311-1408 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBCF01000297.1 Calditerricola satsumensis JCM 14719, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 2310 30 100.0 37 .............................. AACCGCATTGGCGCGCGCATCAGTGAGCTGCACACCG 2243 30 100.0 36 .............................. TCGGCGCTAGCCTTGGCGGACTTGGCCGCCGACCAC 2177 30 100.0 37 .............................. CGCTTGTACGGGGGCAGGAACGTGCGCTCGAATGTGT 2110 30 100.0 37 .............................. AGCTATGGCCGGTTGATGGCCGTTTGATGACCGTATC 2043 30 100.0 37 .............................. CCGACGAGATCGAGGAGGCGAAGCAGGTGGCTGCCTC 1976 30 100.0 37 .............................. CCTCTAGCTCGATTTCAATCCGCGGGTTTTTCCTGTC 1909 30 100.0 38 .............................. CCCAAATCCGAACAAAGGCGCGTCAGGTGCGGCGTGAG 1841 30 100.0 37 .............................. CAAAGCCCGCCCCCAGCTTGTAGCGGTCGTCCGTGTT 1774 30 100.0 36 .............................. TTGTAACGAATAACAAAGACCCTGAAAAGAGAGGAA 1708 30 100.0 39 .............................. TGTACGTGCCGCAGGAATTTTCTCTTTCCAATTTTCTGG 1639 30 100.0 37 .............................. CCTTCGATGCCGGCATTCTGACGAATTTGGCATCTAC 1572 30 100.0 37 .............................. CTGAACTGGGGGAGCGGGTGAGCCACGAGGCAATACG 1505 30 96.7 38 ...........................G.. CCCGCGGATCACGCGCACGATCTCCGCGCATATGCCTC 1437 30 86.7 0 ................C........CA..T | ========== ====== ====== ====== ============================== ======================================= ================== 14 30 98.8 37 GTTTGGAGCCTACCTATGAGGAATTGGAAC # Left flank : AACCAGAGATTCTTGGCGTCCCTGTTGGCCGAGTATAT # Right flank : CGTGTAAGGTACCGTCTAACTTACAGAGTGAATAGACATCTGGTTTGGCTGTGCGTTGCTAAAATAGAACGACCGCCCCCAAAGGCGTTTGATTCGCCTTCAGGGGCGGTCTTTTTGTGGATGTTGGCGTTGGTTACGGGCGCCGCAGCGTGACGCACGCCTCGTCGTCATAGTAGAGGTCGGTTCCGAGCTCGAGGCGGCCAGTGTAGAGAGGCTTCGGCGCTTCGGTCAGCTCCAGCCGGTAGACCGTGCTGATGTAGAAGGGCACATCAGGTTCGCCGACAGGAACGGGCGCCATCTTGGCCACCGGGTAGCCTGGGCCACAATGTTCTCCAGCTGGTAGTCCTGGAAGGCGCCGAGCATGTCCGTAATGGCGAAGCCCATGTCAAGCAGGCCGCGCTGGATGTCACGCCACTTCTTCCACGAGGATTCGAGGTACGAGAGGCCGAAATACCCGGCCGAACCGGGACCCCGCAACGCTTCGGTGCAACGGCTCAAGA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGGAGCCTACCTATGAGGAATTGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 10676-10413 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBCF01000037.1 Calditerricola satsumensis JCM 14719, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 10675 37 100.0 38 ..................................... TTGAACCCGTCGTAGAGGTCGGACAGGGCGCGCGCCGT 10600 37 100.0 39 ..................................... TTAATCGCGTACTCGACGTTGTACCCGCATTTGCGAAGC 10524 37 100.0 38 ..................................... GAGAGCACCAAGACCGTCGAGCCGTATGGGAAGCAGGC 10449 37 78.4 0 ....T...................CCT.T.A....TA | ========== ====== ====== ====== ===================================== ======================================= ================== 4 37 94.6 39 GTTGCAGAGAGTTGACTCGTTGCAAGAGGATTGAAAG # Left flank : ATTGAAAGTCAAGTCTCCGACCGTCCCAATGCCCTGCGCTAAA # Right flank : CATATGAGCTTGAGCATATAAAGGCGCTCTTGAGATCCATTGCCGTGGTTATGTACGGGGTGAAAGGACAATTAGGAAGTAAAAGAGTAAAAAAAGTAAAAATAATTATACATCCTGCTATAGTATGAGTAGTCGTTTGATTTAATTAAGGAGGGATACCTGTGAGCAACTGCATCTTTTGTGCAATTGCCCAAAATACGGCGCCTGCTTGGGTGATCTATGAAGATGAGCATACGATGGCGTTTCTGGACATCGCTCCAGCGACAGATGGCCACACCCTGGTGATTCCCAAGCGACACGTACGGGATCTCTGGGAACTTTCTGAGGCGGATGGTCGTCATGTGATGGTGGCGGCGAAGCGGGTTGCCGAATGGATCAAGCGGGCGCTTTCTCCGGACGGTGTTAACCTGTTTCACGCAACGGGAGCCGCGGCTTTCCAGAGTGTCTTTCACTTTCATCTCCACGTCGTCCCGCGGTACAACGGCGATAGGGTGCGAAAG # Questionable array : NO Score: 5.59 # Score Detail : 1:0, 2:0, 3:3, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGAGAGTTGACTCGTTGCAAGAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.10,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA // Array 1 7001-8813 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBCF01000051.1 Calditerricola satsumensis JCM 14719, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 7001 37 100.0 36 ..................................... CATCTTGCGGGCCGCCTTGGCCGCGTCAAGGCTCCC 7074 37 100.0 36 ..................................... ATTAACGAGATCGCGAACCAAAAATCGCCAGACCCC 7147 37 100.0 36 ..................................... TTGCTACTTCGCTCATCCCCTGAAGCGCGCGCTGAA 7220 37 100.0 38 ..................................... CGCCGCTTCTCCCGCTCTCGGCGGTCGTGTTCGAGTCC 7295 37 100.0 39 ..................................... GCGCCCTTAGCGTCGGGTAATCATATTGCGCAAGGGCAG 7371 37 100.0 36 ..................................... GTAAACGGTACGTATTACGACTATACTGCCGCGTCT 7444 37 100.0 37 ..................................... GCGCGACATCGAGGTGTTTTATCAGCGGTTCGCTATA 7518 37 100.0 38 ..................................... GTACGTGAACGCCGCCGCAGATGGGCACGCAATTCCAC 7593 37 100.0 37 ..................................... AGAGCTTGGGACAGTTCGTTCAAAGTCGGCGCATACC 7667 37 100.0 35 ..................................... CAACACCATTGATTTTTGTGCCGGTTACGTCCAAC 7739 37 100.0 36 ..................................... CGGGGCTAACTACCTGCCGGCCGACACCGGCTCGTC 7812 37 100.0 34 ..................................... AGATGTATCCTGCTATCTCACGCAACAGGTTCTG 7883 37 100.0 35 ..................................... GTTGACTGCGTGCGATGGGTGCCAGCGGAAAAGGT 7955 37 100.0 42 ..................................... GTGCTGTTGATCTCCTGGGCAATGCGCTCCAGCACGCGGCGC 8034 37 100.0 38 ..................................... TTTCGAGTTCATCTAGCAAACGCGGCAGGATATTTCGA 8109 37 100.0 38 ..................................... ACGACCCGCAGCCCGTATCTGCCAGGGGCATACTCACC 8184 37 100.0 38 ..................................... CCGGTTCTCCCACGACCTTGCCTACGATCGTGGTTGTG 8259 37 100.0 35 ..................................... TGTCATCGTATCTCGCGTGATCGACGGGGACACGT 8331 37 100.0 39 ..................................... TCAACCAGCCACGGGAGATCGGCATCGCACCAAAGAGCC 8407 37 100.0 35 ..................................... ATTTCCACCACCTGCACTCCTCCCGGCTGGGCTTC 8479 37 100.0 37 ..................................... CAGCGCGACGTATTGAGCAAGCTGGTCGTCCGTCAGC 8553 37 100.0 36 ..................................... TTAGCCTTTTGGAATGCTTTAACGGCATCTTCAGTC 8626 37 100.0 41 ..................................... CCGCCGGCCGCGGCCGTGTTCTCGTCGTCCTCTTCGCGCTC 8704 37 100.0 36 ..................................... TCCTTACGTCACCGTCTTGCTCACGCTCGTCAGCCG 8777 37 83.8 0 ............................C...CCTGT | ========== ====== ====== ====== ===================================== ========================================== ================== 25 37 99.4 37 GTTGCAGAAGACTGACTCGTTGCAAGAGGATTGAAAG # Left flank : AAGGCCTTTCTGTATATCATCCCGGAGAAGCGTGCCCACAACGTTCCCATTACCGAGGGGCTGCGCACCCACATCCGGCGCATGCTCACCATGATGCGCACCATGGTGGAACGGGAAATTTTTCCCGAGCCGCGATCCCGTGCCCGCTGCTTTAGCTGCGAGATGCGCCGCTATTGCAACGATCTCGATGATGCGTCCGGCGCGTTTGAGGAAAGTCCCGCTCAAGCCAAACGGTTGGTCGATTGCTTCTGAAAATTGGCATTCGTGTTTTCAAACGTCCCTTGCGCTCGCAAGGGGCGTTTTTTATTTCACCAGGGTTCAGATGTACTGATACGTTCGGGGATATTTGTTAACACTAATAAAAAAGAAGTTAACAATTTTTCGTGGCTGACCCCCGGTTTTCGTGCAAACCGGTCATTTTCGAAAAAAATCTTGGCAACGAGCGGGGGTATATGGTAAAATCCCAGACAAGACAAGGCTTTCACGGCTCACCGACATCG # Right flank : AATGAAACATGCGGGGGTTTGAGCAAATGAAAACCTCCTGATATCGTGGTGGTGTCAGAAGAAGCACCCACCACCACGAAAATCAGGAGGTAGTACCCCTATGATAGCACAAAATCGCAAGCTTGCCACGGCTCTAAGTCAATAACTGTGGATGTGAGGTCAACCAAGCCAAGGGCATAAAAGCGAGGAGCATCTTCCGCACATAGATTTCGCGGTTGCGGAACCCGTAGCTGATTCGTTTGAGCAGCTTGATCTTGGTGTGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGAAGACTGACTCGTTGCAAGAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 1 746-42 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBCF01000523.1 Calditerricola satsumensis JCM 14719, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 745 30 100.0 38 .............................. GCCGGTGAACAGGTGGCCGGCGAAATGGCCCGCGTCGA 677 30 100.0 37 .............................. TCGTTGGAAGCGGCGTACCGCAATGATACGCCCTTCC 610 30 100.0 37 .............................. TTGGCCGTAAGCCGCTCGCCCCGTTCAAAACGCTGGC 543 30 100.0 39 .............................. TTGGTATCCGTTCCCTGTTCTCAACCAAGACATTTCCCG 474 30 100.0 36 .............................. GGATCTACCTCGAACCTCATGTAGTCGACCGTTTTA 408 30 100.0 37 .............................. ACCGCTTGCACTGCTTCTTCGACGGTGGCGTAGGTGC 341 30 100.0 38 .............................. GGCCTCACCAATGAAGTGAAGCGGGCCGCTGCCGGTAT 273 30 100.0 37 .............................. CTGACCGGCGCGAATACGGTGTTTTTGTATCTGCTCA 206 30 100.0 38 .............................. CCCTCTCGCCCGCTACGAGGCGGAGGGCGGCGAGTATG 138 30 100.0 37 .............................. CCTCCGGGGCTGTGAACACCACGCACATCGCCGACAA 71 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 11 30 100.0 38 GTTTGGAGCCTACCTATGAGGAATTGGAAC # Left flank : AACATCGGGCACAGAGATGGTTCTACACAGCGAAAGCT # Right flank : CCCAAGGTCGACGGAATCGCTCTCCACCACATGGCCCACCCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGGAGCCTACCTATGAGGAATTGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [23.3-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 9013-10722 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBCF01000035.1 Calditerricola satsumensis JCM 14719, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =========================================== ================== 9013 29 100.0 39 ............................. CGTGGTCCACTCTTCCACCATCACCCCCGTTCGCCCAGC 9081 29 100.0 39 ............................. CATATCTTCTACAACAGCTGCACGAGTTAAAAGAATATG 9149 29 100.0 37 ............................. CTTTTCCTGGAGGCCGTCTGGTATACTGGAAAGTGAC 9215 29 96.6 39 ......................G...... GCCAAACTACGGGGGTGCCCGTGACTATATCGATACCGA 9283 29 100.0 38 ............................. CTTGGTACCGCCTGGGACTCAACAACCACGTTTGCCCG 9350 29 96.6 39 ...........G................. CAGCGGGCCGGCCTTCGCAGGCGAATGCGGCATGTAGGC 9418 29 100.0 40 ............................. CACAAATGAATCACCGATAAGATAACAAAGTCGTTTAAGC 9487 29 93.1 38 .GG.......................... TGTTGCTGCAATTGGCAAGACAAACCGCGCGTCTTCCG 9554 29 100.0 37 ............................. CAGTGCGCCCATGATTTCGTCCTTTTCGTACTCCCGC 9620 29 100.0 43 ............................. CTCACCGCCCCTCGCCGTGGTATAATGCTGGTAAGTCAATCCC 9692 29 100.0 38 ............................. CAACGGTTGTGGACGCATTGCTACCAGCCAGCAGTTAT 9759 29 96.6 41 ...............G............. CGGCTCTGGTTCCAATTCCAAAAACGCCAGCTGTTCGCCCA 9829 29 96.6 22 ....................C........ CATGACCAGCTTGCCGCAAGTG Deletion [9880] 9880 29 72.4 37 ..CC...GT....GCT.......A..... CCCGTAGTCTAGCACGCGGAAGTCGGCACCGTCGGAA G,C [9883,9892] 9948 29 100.0 38 ............................. CTTCTTTGTCATCCTTGCGTGAATAGCTTCCACCACGA 10015 29 100.0 40 ............................. TTGTCTGCGCTCGTTTAGGCTCAGCCACCACGCCTCTTTC 10084 29 100.0 40 ............................. TCTGTTTAGCCCTCCGCTCGCGCTCCTCGCGTTCGGCCTG 10153 29 96.6 38 .....................A....... TAGCAGCAGGGCCCCACCGATCCCCTTAATGTCCCGTT 10220 29 100.0 39 ............................. CACAGCCTGCGAGGTGACCGGTCGTGAACATGGCATTCG 10288 29 100.0 40 ............................. CCGCTTCCCTTCAAACGCCTCTTGCGCCTTCACTTTGAGG 10357 28 96.6 39 ..........-.................. CCCGGTTCGCGGCTCGTTAAACAAGGCGACGCCGCGCAG 10424 29 100.0 38 ............................. CCGTGTACCCCCAATCAGCCATGGCCCTCTCCATGGCC 10491 29 100.0 39 ............................. TAAGAGACGTGCAGCTTCCTCAGCGTACGGACGAACTGA 10559 29 100.0 38 ............................. CGCCGCCTTCATCACCAGCGTGCTGGTGACGTAGACGG TA [10573] 10628 29 96.6 37 ...........T................. TGCGCGTCAAACGCTGCACGCTCGTCGGGGCTAAGCT 10694 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= =========================================== ================== 26 29 97.8 38 GTTTTGACCTGAGTTATAAGGGACGGAAA # Left flank : CAAAACCGCGAAGCCGTTGCGACCTTGAACAAGACCTTGAACAAGTCTCGGGATATGCTAGATCGGGCCACCGGGATTAAAGCTCTTAAGGAGGTCTTGAAAGATAAAGAATTTATTCAGATACTTGAGCTGGAGGTCAATGCGCAGAGAAGCAATTCGGTGCAAAAAATGAAACTGGCAAAGCTTCTCGACGAATTGACGGAAAAACGGCATGCTTCCGTGGTGGCACACGGCATGAAACCGGTGTCGGAAGAAGACGCTGTAAACGGCTTGGCCGCCGCCAAAACGCTGTTGTCCAACCTGTTGCCGGATGGAGATGCGCTGCTTGCCTCTTATCCCTTGCAGCGTGCCCAGATTGAGCAGCTGATCGACTACTTGGCCAAGAGTTGACTGCAAGGTTTCGTCGACCTCCCGGCTTTTTTGCACGATTGGAGGTTGACGACATATTCAATGTGATTGAGCAAACGAAAAGCTTGATGTAGCAAGGTTTTTGAATGGGG # Right flank : CCTCGGATTGTTTGGTTTTCTCAGCGCCACGGTGATCCGGTTTGACCTGAGTTATAAGGGACGC # Questionable array : NO Score: 3.13 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGACCTGAGTTATAAGGGACGGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 4719-4319 **** Predicted by CRISPRDetect 2.4 *** >NZ_BBCF01000079.1 Calditerricola satsumensis JCM 14719, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ===================================== ================== 4718 38 97.4 33 G..................................... TTGCAACGGCGATGCGTATCGCAGTTGGGTGGC 4647 38 100.0 35 ...................................... ACGCGGTTCCGGTGGAAGCCGTCGACGACGATGTA 4574 38 100.0 33 ...................................... AAGGTAGAAGGTTATGGGGTATATTGTCTGTGA 4503 38 100.0 34 ...................................... ACGCCTGCCCTGCCTCAAGACATCAAAAAAATTG 4431 38 100.0 37 ...................................... CGATCATGCGCTTGCCGAAATCGGCCCCAAAGTCCCA 4356 38 84.2 0 .............................C...CCTGT | ========== ====== ====== ====== ====================================== ===================================== ================== 6 38 96.9 35 CGTTGCATTCGTGTGACTCGCTTCAAGAGGATTGAAAG # Left flank : CTCCTCGAGGCCGAAGGGTTCGTCAAGGTGGTCGCCGACAAGGAGACGGGCACGGTGCTCGGGGTGCAGATCGTCGGCCCCGAGGCGTCGGACCTCATCGCCGAGGCGGCGCTAGCGGTCGAGATGGGGGCGACGCTGGAGGACATCGCCCTCACCATCCACGCCCATCCGACCCTCGGCGAGACGATGATGGAAGCGGCCGAGGTGGCCCTGGGCCACGGCATCCACGTGCTGACGAAGTGACGCGCAGCCACAAGCCGGTCTTGCTGATGCGGCAAGGCTGGCTTGCGTATTTTTGATGGCTGTGGTTTCATTTCACGGTTAAATGGAATGAATATTCAAATAGTTAACCGGTGTTCTTTCGCTTCTTTTCACTTTTTCGTGGCTGCCCCCTTGTTTTCGTGCAAAGCGGCGATTTTCGAAAAAAATCGTTGGTAAAAGGAATAAGCGTGTGGTAAAATCCCAGACAGGACAAGGATTCTTGGCTCCTGAGGCACTCG # Right flank : AATGAAACATGCGGGGGTTTGAGCAAATGAAAACCTCCTGATATCGTGGTGGTGTCAGAAGAAGCACCCGCCACCACGAAAATCAGGAGGTAGTACCCCTATGATAGCACAAAATCGCAAGCTTGCCACCATTAACGATTCCACGCTCATCGTAGCCGTTGATATCGCGTCCCAGAAACACGTGCACGTGCGATTAACTGGCGTGGGCACATCCTTGGCGAACCGTTGATCTTTGACAACCGACTTGAGGGGTTTGAGGTGTTCTTACAGTGGATCCGTCAGCTGCAGGCGAAACACGGGCTTGTGGACGAAAATGAGAAAATAGTGCATTTTAAAAAATTTTAGTTTATTTTTTACAAATTTGTGACAGTAAAAGCAAAAGAATTTGTCGAAAAAGTTGGTAGAAAGCGCTTTCATTTAGGAGGGATTCTGATGTCCGATCAAAAACAGCGCCGAAGAGTGTTGATGGCCAGTCTTGTCGGGAACTCCATTGAATGGTT # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:0, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGTTGCATTCGTGTGACTCGCTTCAAGAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.63%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.90,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //