Array 1 3082-118 **** Predicted by CRISPRDetect 2.4 *** >NZ_QROA01000048.1 Lachnospira eligens strain AF41-18 AF41-18.Scaf48, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 3081 30 100.0 36 .............................. TCAGACGAATTACTGGAAGTATTAAGAAGTGACGCA 3015 30 100.0 35 .............................. GATGAAAGCTACATTAAAAGCACTGAAAGAGTTTA 2950 30 100.0 36 .............................. AGAAGCACTCCTTACTAAAATACCCCTAATATTTTA 2884 30 100.0 36 .............................. AAAGATTATGAATCTAGCGGAGAAGCTCGGCTCTGG 2818 30 100.0 34 .............................. GGTGTACTACCAGACTACTACGAGTGATGAACAG 2754 30 100.0 37 .............................. GCTCAATCTTGGCAGATACAGCAGAGCCTAATGTTAA 2687 30 100.0 34 .............................. ATTAAACGATGATTTTAAAAGAAGATATGTTAAA 2623 30 100.0 35 .............................. ATTTCTCCCATAACTGTAGCTGCCATACGCTTACC 2558 30 100.0 34 .............................. ACGACAATCGGGTTAAACTCGTCTTTATTAAACT 2494 30 100.0 34 .............................. TTACATGCCGTTTCTTTCGTAGTGCGCGCTACAA 2430 30 100.0 35 .............................. TGAGCAGTATTTGTTACAGAAAATGGAACATAAAG 2365 30 100.0 33 .............................. TTTCCCCCTTAACCATAAACAGAAACGCAATGT 2302 30 100.0 35 .............................. GCAAAGAAAGCTACGCTATCCCTTATGGGATTTGA 2237 30 100.0 34 .............................. ATATATTTTCGATTTCTGTTCTATGATTATATGG 2173 30 100.0 35 .............................. AGAAACTGGCGCACCCAACAATAGGGTATCATATG 2108 30 100.0 37 .............................. TGGCGAATATGACAAAGAAACTAATATGCAGGATAAA 2041 30 100.0 36 .............................. ATATTTATTACAGAAGTTTGAGCAGAAAGAGTTTGC 1975 30 100.0 35 .............................. TGGGACAATAACCTAATGCACACGATATTCCGCGC 1910 30 100.0 36 .............................. AAGTGGTGATTCATTATGGACTATTGTAAAAAATTA 1844 30 100.0 35 .............................. CCAAAAATGCTATTGAATTCTGCAATTCCTTTTTG 1779 30 100.0 35 .............................. CCTTTTATAGACTTAAAAATATTGTCTATTGCACT 1714 30 100.0 36 .............................. AGTACGCGCATATGTGCGCGTGTGTATGTGTGTATA 1648 30 100.0 35 .............................. CAGCATTTGTAAGACCATAAAGCTCTCCTTCGACT 1583 30 100.0 34 .............................. TATGTTCCAGCAAAGAGGTATATCTTATCTTCTT 1519 30 100.0 34 .............................. CCCAATCCGATAGTACCACTTGCAATCATTGCAG 1455 30 100.0 35 .............................. ACATTTGATACGAGTAAGGCAGGCACACCAAGTTG 1390 30 100.0 36 .............................. AATCTACACAAATGAATATCTTTTGAAGTGCAGCAA 1324 30 100.0 35 .............................. CAATATGGCTCAATCTGCTAAATCCCAAGCCGATT 1259 30 100.0 36 .............................. AAACCAAAATGGCGGTGCATAGTGAAAAATTCTATC 1193 30 100.0 36 .............................. TAAAGGCGAACAAAAATATGATCTTACAATTGACCT 1127 30 100.0 35 .............................. TTGTAATAATTGCGTAAACTAAAATACAGGAATCT 1062 30 100.0 35 .............................. TAAGAATATAAAAGGACTACATAATGGTTATTCTG 997 29 96.7 37 .........................-.... CTAATGTGTCAAGCCTCGTCCCATCTTTCAGGTTGGG 931 30 100.0 35 .............................. TAAGTTGACCGAATGGCAACAAACAGATTGCCGCC 866 30 100.0 36 .............................. TATAGCTTTTTATACTCTATACCGCTGCCATAGAGC 800 30 100.0 37 .............................. AAGATTGGGTAAAAAGGAGAAAAAAATAATGAACACT 733 30 100.0 35 .............................. CCAAGAACCTTTGTTAATCTTTCAGTGTCGTGTGT 668 30 100.0 35 .............................. AGTTTCTTGTTAATTTCATCCTGAACATCTAAATT 603 30 100.0 34 .............................. TTCCATGTCTGCTTATAGACTGCATCCACAACAC 539 30 100.0 35 .............................. CAGAAAACTATGATACCACAACCACGAATGGAAGA 474 30 100.0 36 .............................. TCCGTTCAGGCGGTCGGCAAGGTTCGACGCCCTGCG 408 30 100.0 36 .............................. AAGACTACTGTTGTCTTTCCAGCAAGCAGCGAGCTG 342 30 100.0 35 .............................. ATGAATCTGTATATAAGATAAAGTAGAGCGACAAT 277 30 96.7 36 ................G............. CATTTTCCTGTCTGCTTTGTATGCTCGTTAATCTTA 211 30 100.0 34 .............................. GCCCAATCTACCGGGCAATTATCAGGTCCCCAGA 147 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 46 30 99.9 35 GATTAACATTAACATGAGATGTATTGAAAT # Left flank : GAAGGCGCAATAAATGCAATGATTATCAGAGGTATGCAGAAATTAATTATCTGATTGAGAATATATTTCAGAGTTACAACGATATTCAAAATGGCGCGTGAAAATGAATTGCCATCAGTTGAACTTAACAGTAGTCCCACCATGACGCCGGCAATAACGCCCACAAGCAATTTGAACGGCAGGCTGCGAAAAAAACTATTTTTCTTCATTTAATAAATCTCCTTCATTGGTGTAGTTAATAAAAATTATAATATAGGCCGGAGAAAATAACAATGGAAAGGTTTGGGGGATTAATATAGATGAGTTTTGTTAATTAGATTATGCAAGTATTTACCAGGTGATATATAAGGGGATTCTCTAAAAAACCAGTAAATACCTGAAGTTAGAGGCTTATTTGTCTCGTGGTAATAAATAAATTAATTGGCTGGTATTTTTGGGGAAAATGGACTAAAATAGGCAATGAGAGATTTAAGCATGATTGAAAAGGCTTAAATTCGTTG # Right flank : TATTATATTTTCTATGTGAACTTTTATTTATACATCTTAAGATTATTAATATTTAAAGAAAAAACCAGAAAGTTTGTTAAGCTGTATAATATTTGGTTTGTATACATCATTAATATAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA //