Array 1 14511-12098 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBDS010000314.1 Acidithiobacillus ferridurans strain Riv11 Contig314, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 14510 29 100.0 32 ............................. AAATATCAAGAGCATCCGAACTCGCCGCCGCT 14449 29 100.0 33 ............................. CTGGACGTGAAGACGGTGGGCCGAGGCGATACC 14387 29 100.0 32 ............................. ATTTGCCGGTCTGTGTTGATGGCAGCGAGTTT 14326 29 100.0 32 ............................. GACGGAAAAACGTGGAGGAGCAGGATCAAAGA 14265 29 100.0 32 ............................. ATTTGGATTGAGCGAGGGCTGCCGGTAGATGG 14204 29 96.6 32 ............................A GGCCATGCTCCGGGCATTCCCGTTGCTCTATT 14143 29 100.0 32 ............................. CAACTGAGCATTGCGGTCGGTATCCCGATCTA 14082 29 100.0 32 ............................. CGGAGGCAGACAGCCAGGCCAAGGGGGTCATG 14021 29 100.0 32 ............................. TCACCAGCGCGGGCACCGCCCCGGCCTTCCGC 13960 29 100.0 32 ............................. TCGGGGTATAAATTATTGGTTGCTAGTGCTAA 13899 29 100.0 32 ............................. CGCACGAGAGTTGCGCCTGATCCTCGGATTCA 13838 29 100.0 32 ............................. ACGGTGCATCGCTCGCGCCTGCTGCGGTTCGT 13777 29 100.0 32 ............................. AATTACGGCCTGCTGAATGACCCCAGCCTGCC 13716 29 100.0 32 ............................. CGCACCAACTTCAGCGCCCGGCAATCGCTCGG 13655 29 100.0 32 ............................. TCCCAGTACACCTCCTGATCCATCAGACCGCC 13594 29 100.0 32 ............................. TACGCGGGCCATCCCTTAGTCATTCTGGACTG 13533 29 100.0 32 ............................. AGTGGAAGAAGATCGGGGCCATCGGCGCGGAA 13472 29 100.0 32 ............................. AGAACGGGCAACATCTGTTCGGCGGTCGTCAA 13411 29 100.0 32 ............................. TACCAGAACGGCGTGTCAGACTTGGCCTGTGC 13350 29 100.0 33 ............................. CACTCTTTTAGTGCGTCCCGGATCGCAGTTGTG 13288 29 100.0 32 ............................. GCCTGAGCGTCATCTTCGACCATCCAGAGAAA 13227 29 100.0 32 ............................. CCGGGCGTGGTCATGGCATCCGGCGATGGCAC 13166 29 100.0 32 ............................. AATGCGGAACCGGCCCAGTCTACGAACTCGGC 13105 29 100.0 33 ............................. CGCATTGCCGCCAGCCGGGAGGAAGAGGGCGAC 13043 29 100.0 32 ............................. GTCGCCCAGATCGCGGCCACCACCACCCCGGC 12982 29 100.0 33 ............................. CCATCGCCTGCATCTTGAGCGATGAACCCATGA 12920 29 100.0 32 ............................. ACCACCACCAAGAAAGGCCCGGTGCGTCCTGT 12859 29 100.0 32 ............................. AGATCCCCGCGTGGGCCGACAAGCTCATGGAC 12798 29 100.0 32 ............................. CAAGAAAAAATCCCCTACAAGAAAGCCATCAA 12737 29 100.0 32 ............................. CGACGGGCTTGCCGGTCATCGCCGCCCTGTAT 12676 29 100.0 32 ............................. CTCGTGACTGGCGTATTCCCCGCAATGGCCGT 12615 29 100.0 32 ............................. GCCGCTACCGCACGAAATAACCGGGTAAGGGG 12554 29 100.0 32 ............................. CAGATGACCAATCTGCAGATCGGCATGTATCA 12493 29 100.0 32 ............................. AAACCAGATTTTGTCGTGGCGTACGAAAAAGC 12432 29 100.0 32 ............................. CGCTTCATCATGATCGGCGCCATCACGGTTCC 12371 29 100.0 32 ............................. GCCATATTAGGCGCGCCGCTGGGCGTGGACCC 12310 29 100.0 33 ............................. GACACGGTGACGATCTGCCCTGCGCAGGACACC 12248 29 100.0 32 ............................. GGCTATATCAGCCCAAAGCTCGGTAATGTGGA 12187 29 100.0 32 ............................. CATAAGCGGCTGGGCCTGCGGGTGTCCGAGGC 12126 29 93.1 0 .....T..........T............ | ========== ====== ====== ====== ============================= ================================= ================== 40 29 99.7 32 GTGTTCCCCGCGCGAGCGGGGATGAACCG # Left flank : CTCGGATTC # Right flank : TCGTGATATGGCCTTCAGCGGTTAGCTCACTTCGGTGAGTCGGAAGTCTATGCTGCCATGAAGTAGTCACCCCAGCAGCTTTGCCAGGTCTTCCGCTCGTAGATGGGTATAACGCTTCAGCATCTGCAAAGTTTTGTGCCCGGTAATGGCCGCCACCTGCATCGGGTTGAGGCCCTTCTCAAAGAGGCGGCTGGTGGCCTCATGGCGGAGGTCGTGGAAGCGTAGGTTCTCAATGTTGGCACGGCGGCAGGCTCTATCGAATGCCTGGGTGATACTGTCCGCACGGATACCCCATACCTGCCCATCTACGCGACGGGGGAGATGGGTAAGAACGGCCAGCGCGCGACTGGAGAGCGGCACCCGGCGCGGATCCCCCGACTTGGAATCAGGGACCAAAAGCACGCTAGTCCGAAGATCAACGTAGCACCAGTGCATTGCTGCAATTTCTCCCCGACGCATGGCTGTTTCCATGGCAAAGCGGATGATGGAGGGCAGAGGTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCGAGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCGAGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-8.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //