Array 1 13974-13803 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOFH01000040.1 Basfia succiniciproducens strain KPR-2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 13973 32 100.0 37 ................................ GAAACAATTTAGCTTGAACGTTTGCGATGTTTTCTTT 13904 32 100.0 38 ................................ GAAACTGTGCCCGTACTTCTCTGCGAATGCGTATTCCC 13834 32 96.9 0 .............................C.. | ========== ====== ====== ====== ================================ ====================================== ================== 3 32 99.0 38 GTCGAAAGACCTTGCCCTGTCTTAAAGGGATT # Left flank : GAATGTTGTTCCATTCAGACCAAGGTAGTATTTATGGCAGTGAAATCTTTACTGATTCAGTTAAGAAACATGGGCTTACACAAAGTATGAGCCGTCGTGGTAACTGTTGGGACAATGCGCCGATGGAGCGTTGGTTTCGGAGTTTTAAATATGAATGGATGCTGAAAGGTGGTTATAGTGATTTTGAAAGTGCTGTAAATGATGTGAGAGAATATGTGATGTATTATAATCATATTCGCCCACATAGCTATAATCAAGGTCTATCTCCGATTTTAGCAAAAACAACTTATCGGAGACTGTTAAATTAGTTGACCACTACACATAACATTTGATAAGAAATTTGTTATACTTCTTTTGTCTTTTTCTGTCTGGAATAGTAAAATTTTTTAATTGTATGATTTTTATACACAAAAATAAGCCAACTTATTACGGTACTATTTTTTACAAAAATATGTTTTTTAACCTATTGATAAGTAAGATGTATTTTTGCTTACCGC # Right flank : ATTTTATTATCGGACTTTGTTATTAGACGATCATATCGACGTTTTTCTTTTGTCTGTATGCTAACCGGAGAGAATTCAATTTGAATTTATCTAATGTATATTTTGGAACCGTGGTTATCATTTACTTGCTTATTTTCACCACTAATAGATAAATTCAGCACAATATAAAAGCTATTGATAATAATTTCATTGGGAATATAAGCCCGTTTATTTATAATAGACGGGATTATTTTTTTATTTTGAAGTATTTTTATGTTTGAACAAGAAGCATGGCAGCCAAGCGCGCCGATTAAAACTCTTTTTACCCGTGCAAAAATTATCAGAGAAATCCGTAAGTTTTTTACCGAGCGAGGCTTGTTGGAAGTGGAAACACCGGTGTTAAGCGAGTTCGGCGTTACCGATGTGCATTTATCCACATTTAATACGGAATTTATCGCGCCGATTGGTGAAAATTCAAAGACCTTATGGCTGATGACCAGCCCGGAATATCATATGAAACG # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAAGACCTTGCCCTGTCTTAAAGGGATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.50,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 1 93457-92559 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOFH01000006.1 Basfia succiniciproducens strain KPR-2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 93456 32 100.0 34 ................................ ATCCACCCATTGATTCGCAAAGTAGTTTGCACTA 93390 32 100.0 34 ................................ TTTTGTTTCGGTTAACAGCGAGGTATGGTTTCGG 93324 32 100.0 37 ................................ CATAAAAAAAAGCCCTCGTAAAGAGGGCAAACAGGAT 93255 32 100.0 34 ................................ TAGCCTTGCCAATCAAAGTTTGGCAAGCGTTGAA 93189 32 100.0 36 ................................ TGCCACTGCATCAGATAGCGCCATCCGCCGTGGCGC 93121 32 100.0 33 ................................ CGCAAATTAAAACCGCTTTTGCGCAGTTGCTGC 93056 32 100.0 34 ................................ TTCGTAATGTAAACGAGCCTTAATATCCTTGCGT 92990 32 100.0 35 ................................ AAATACGCATATCAAGGCAACATCAAAGCGATGTG 92923 32 100.0 35 ................................ AAAAAAGAATTGATGATTGTTAACCACTTTAAGTG 92856 32 100.0 34 ................................ ATGACTATGATTGAGTGGGCCGAGAAGTCTATGT 92790 32 100.0 34 ................................ GGTGTCGGATAATCTTTTTGCTAAACCCTGAATC 92724 32 100.0 37 ................................ ATGGCAACTTTAGGTTGCTCAAGCTCGTTTACTTGTC 92655 32 100.0 33 ................................ ACTATCTTTGATTTGTTTTGGAATAGATTTAAT 92590 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 14 32 100.0 35 CTCCGCTCTCACACGAGAGCGTGAATTGAAAC # Left flank : AATTTTCTAAGGAGAAAACCTTATGATGATTTTAATTACATATGATGTGTCATTAGAAAATGAAGGCGGAGAACGTCGATTACGTCATATTGCAAAGCATTGTTTAGATTACGGAATACGCGTACAATACTCTGTGTTTGAGTGTGAAGTGACACCCGCGCAATGGGTCGAATTAAAAGATAAGTTACTTAATACCTACGACAAAGAAACCGATAGTTTACGTTTTTACCAACTTGGAAGTAAATGGAAACATCGAGTCGAACATTACGGAGCAAAACGTGCCATTGATATGTTTAGAGATATTTTAATTATCTAAACACGTTCGCTAACCAGTAGTTCTCATCAATTCCCTAGTTTATTAGCGCATTTATTTTTTCTTATATTTTTAATCAGTTAGAAAATAACTATATTTCTTGCTATACTTTAAGCCGTTATATTCAGCCTGGTTAGCGAAATGGCTATTTTCAAGCTAGATATAATGAGCCTTCCTAGTTAAGGCT # Right flank : ACATCCGCTATAGAGGACTCGAATTTCATCGTCCTCTGCTCTTACCCGAGCATAAATACCCCCTGTAAATTTTGTAATTTTTCGACCGTACTTTTTTGTTCTTACAAAAAGGAAACTAAAATTAGAAACTATAATGACAGAAAACAGGAAAAGTTCTTTGCTCTAACGAAAAAAGCCAGTCAGTGAAAAACTGACTGGCTTTTTTCATTCCATCTTAAAAATGCTGCTAGCCTATTACTTTTGGTAAATATCCGCCTTCAATTAGGAACGGGACGTTCATGATGAGTAAGCCCAGCAATAACGCGATTAATAGGGTTAAGTTTCCACCGATTACTCGATACGGGAGATTCGGATGCAGTTTTCTTGCTCGCCATGCAAGACCGACCGGTAGTACTAAACCGTAGAAAGTGAACATTTGACCGGCATAACCTAACGCGGCAATAAAGCCTTCCGGATAAAATAATGCAAAAGCGAGAGGCGGGAAGAAAGTTAATACGCCT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCCGCTCTCACACGAGAGCGTGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.90,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : NA //