Array 1 22-830 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKGH01000161.1 Acinetobacter ursingii strain TUM15077 sequence161, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 22 28 100.0 32 ............................ GTTCGTAAAAACAAACTGGTCAAGTACATTGA 82 28 100.0 33 ............................ AGTGCAATTTACATTGGTGTTTTCAAATTTGGT 143 28 96.4 32 ....T....................... ATGATAAGCAATCAAGTCACGATCATTGGGTT 203 28 96.4 32 ....T....................... GATCAAACAGGGCATGAAACGTCCGGTCATGG 263 28 100.0 32 ............................ GAAAGCTTGAGTGAATGCAAGAAGCGAAAGGT 323 28 100.0 32 ............................ TAATAAACCATTTGAAAACAGTGATATACAAA 383 28 96.4 32 .T.......................... TGGTGAAACCAACATGTTATTTTTTGATTTTT 443 28 96.4 32 ..........A................. AGTCCATGACATCTCGGCTTTAATTTAAGCCA 503 28 92.9 32 .........TA................. TGTTGATAAGCCTTAGCCTTCGCTTCTTGATA 563 28 92.9 32 .T........A................. TTTACTCATACGAATACGTTGAAAAAGGCGGT 623 28 96.4 32 ....................C....... AACATGCGGAAAGTTTAAACATCCGCCTCCAC 683 28 96.4 32 ..........A................. AATCAACACAGATAATTTGCTTTTGCTCAACT 743 28 96.4 32 ....T....................... ATGTAACACCATCAAAACTAGCAACAATACCC 803 28 78.6 0 .T..............G..A....TTT. | ========== ====== ====== ====== ============================ ================================= ================== 14 28 95.7 32 GCTTCCTATCGCATAGATAGTTTAGAAA # Left flank : GTCAACCTTGCTTGGGATCGTG # Right flank : ATTTTCGAGACTCCAAACATTTTGTTTTTAATTGCTGCATCGCTAAAGGATCCATCGGTGCAGTCATCATGGCCCGATAAGCCAAACATTCCTGCGTTTCTTCTGTTGCTTGAGATTTGGCATTCAAGCTATGGCATCCCATCAGTCCCAAAGAGAAAATACATCCTAGAATAAATTTGATGAACATTGGATTTTCTATAATTTAATATTTGCTGATATCAACTCCAATTTTAAAACGCAAAACAGAAAATAGAAACCATTGAATAGACTTGTTTCATAAGTCCCTTTCATTTCTGCCTATGCGAGAGAAATAAAGAGGGTTTAAACAATGATGAAAGACGTCATAGTGTATAGATCTTTTAAAATTTGCTTATTTTCATAAAATCTTCTACCAATATATAAGCATTTTAAAAAGATGAGCTTAATAAAATGACAAATCCAGATATTCAAAGTGTAGAACTCACAAAAGCCTATCGTTTACTTAATCATGGCCCAACTGT # Questionable array : NO Score: 5.49 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.44, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCCTATCGCATAGATAGTTTAGAAA # Alternate repeat : GCTTTCTATCGCATAGATAGTTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: F [matched GCTTCCTATCGCATAGATAGTTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.20,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [16.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1454-4543 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKGH01000170.1 Acinetobacter ursingii strain TUM15077 sequence170, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1454 28 100.0 32 ............................ AGCTTTAAAAAATGCTAAATGCTTGGTGTAAA 1514 28 100.0 32 ............................ ATGCAAATGTCAATTAATGAGAAATAGCAATG 1574 28 100.0 32 ............................ AAAACTTCCAGCTTTAAAATTTGCCCGTACCT 1634 28 100.0 32 ............................ GAGTGCATCGACAGCTTGATAAGCATCTTTAA 1694 28 100.0 32 ............................ TAACCCTGATCTTTAATGAGATCAGGGTTTTT 1754 28 100.0 32 ............................ TCACCTCAAACCTTGAATCAATTGCTTTTTGC 1814 28 100.0 32 ............................ AAAGCGAAACTTGAGAGCGTTTCTCGTTCCTA 1874 28 100.0 32 ............................ GTGGTGCTGTATCTGGTGCGGTTAAAGCTTAT 1934 28 100.0 32 ............................ GTTGATGACATTGGTCGCTACATATTGAGTAA 1994 28 100.0 32 ............................ TAGCAAAGCTGAGAAGCTGGGTGTGAAAAACC 2054 28 100.0 32 ............................ AATGTAAATGCACAGCCATCTTCCTTGAATAC 2114 28 100.0 32 ............................ ATGAATTTAACAGATGCCTTGTACAAGGTCAA 2174 28 100.0 32 ............................ ACCAACAAGCCTGCTTCACGTGCACTACCCTT 2234 28 100.0 32 ............................ TGATCCTGATGTGTACCAAATACCTAGCACAC 2294 28 100.0 32 ............................ TGAATTTTCCCACGATTCACCACTGTTTTAAG 2354 28 100.0 32 ............................ AGATCAACTTTTTCACGATTATTTTTTGCTAT 2414 28 100.0 32 ............................ AAGAGGTAATTGCTTGGGCGCAACAAGATTTT 2474 28 100.0 32 ............................ AGTGTCGGATCGCGTGCCAATCTTTCGAATTA 2534 28 100.0 32 ............................ GCGTACCACTGTGAGCGATGCGGGCGTTAAGT 2594 28 100.0 32 ............................ GCTAGAAACACGTGCCAACTTTTCAGACTTGC 2654 28 100.0 32 ............................ AAACTTGTCGCTGAAAAATGCGAGAATTGAAG 2714 28 100.0 32 ............................ AATTGAAAGACTTGCCATGCACGTTCATCAAG 2774 28 100.0 32 ............................ GAGTGGTTACGGCCTATTTAGTAATGCCTTAG 2834 28 100.0 32 ............................ TAACTGAGCTTAATAATCCATTTGAAGTAAAT 2894 28 100.0 32 ............................ TGCCGAACAACCTGTCCGAACTCGAAATGGTT 2954 28 100.0 32 ............................ TGCTTCGCCAATGTAGATATAGCCTGCATCTA 3014 28 100.0 32 ............................ TCAGCTTTCTGTTTTTCTTCAAGCTCTAACTT 3074 28 100.0 32 ............................ ATAAGATAAAAGACAATATCGAAGCTTCTACG 3134 28 100.0 32 ............................ AACCTAAAACAAAATCATCATTAGTCATATTA 3194 28 100.0 32 ............................ TTGAATTTTTTCTTATTATTTAATTGTTTATA 3254 28 100.0 32 ............................ ATTCATTAAAATGCTCTAAAACATTAAATCCG 3314 28 100.0 32 ............................ ATATGAGAAAAGATATAGAAGATAAGAGAAAC 3374 28 100.0 32 ............................ ACTTGGTGGTTCACGTCCAAAGCGTGTTAGAA 3434 28 100.0 32 ............................ CCTAAGGCATTAGCTAATTCAAGAATAGATCC 3494 28 100.0 32 ............................ TGAGGTTTTTTCTTCACCGCAATCTAAATTAC 3554 28 100.0 32 ............................ TATTGAACAAATTCGATGCGTTCCCCTTTCGG 3614 28 100.0 32 ............................ AATGTATTAGATTGATCTAAGTAACCTTTGGG 3674 28 100.0 32 ............................ AAACTGTCGGATCTACCAAAATGTAATCTCCT 3734 28 100.0 32 ............................ CAACGCGATGCGATGTTAAAGCATATGTTAGA 3794 28 100.0 32 ............................ ATCCTGTCGAATGGGCACGTTTTCTTGAGTAC 3854 28 100.0 32 ............................ CGCCGCTAGATCACGAATTTGGTATTCTCTGG 3914 28 100.0 32 ............................ TTTGATTCGAGCAAACCATCGCAATTCGCCTG 3974 28 100.0 33 ............................ AACGGTGCAGCATTTTGGAAAGATGAAACAGAT 4035 28 100.0 32 ............................ GCCATTTGCTCAAACATGGCAACGGCTTCAGC 4095 28 100.0 32 ............................ TTGCAAGCATTGCCTGAACCATTGAGGTCTCA 4155 28 100.0 32 ............................ ATTGGGAGTTACACGATTAAAAGGCTTATCAA 4215 28 100.0 33 ............................ TGATATAGACCAAATACATTTTGATTTTGGAAT 4276 28 100.0 32 ............................ GCCTACAGGTTGTCCTACTGGTTATGTTTCTG 4336 28 100.0 32 ............................ TTTATGCAGCGTTTTGTTGCCCAAACACACTG 4396 28 100.0 32 ............................ GAAGGAAAATTAATACAATCTGGAAAATTTAA 4456 28 100.0 32 ............................ AATAAAAGCTGCTGGATTTTCACTTGTAATGA 4516 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 52 28 100.0 32 GTTCATGGCGACATACGCCACTTAGAAA # Left flank : TGGAGCAACTGAATCTAACTCATTGGTTAGCAAGGCTGCAAGATTATGTACATGTCTTATCTGCTCGTAAAGTTCCTGAGGATAAGATCAACGGCTATGCTACTTATTTTAAAGTTAATCCAAAATTGACGGTTGAGCAGCGTGTTGTTCATCAGGCAAAACGTCGTGGAATCTCAATTGAAGAAGCACAGGAACACTTTAAAGCATTGGATCTGACAGAGACTTTTGAACCTTATATTAATATGAAAAGTCAAACTAATGATATGAACTTCCGTTTGATTATTGGAAAAAGACGTGTTGATGAAGCAAATATTGGAAAATTTGGAAGCTATGGATTAAGTCGTACATCTACAGTACCCGAGTTTTAACCCAATATTTTTTAGACTCTTTAACAGCTTAATAAAATCAATAAGTTATAACTTTGCTTTAAAACTTTGGGTATTACATACTTTTTAGGGTTAAAGCACTGTTATAACTTTATTTTTTGCTTTATTCTTATT # Right flank : TTCAACAATAGGTTTAGAGGTGGTCCCACTTGTTTGAACAACTAAAAGCGTATTTATAAGTGATATTCCGCTCTAGTTAAGCCACCTTGTTTTGTTGGGGTAGCTGATCATAGTAAAACTCATTTGGTGTCATTTTGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGACATACGCCACTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 6751-57 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKGH01000143.1 Acinetobacter ursingii strain TUM15077 sequence143, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 6750 28 100.0 32 ............................ TAATAGATCAAGACTATTATCGACTGGACAAT 6690 28 100.0 32 ............................ TAATTATGCGATAACCAATATAAATAGAAATA 6630 28 100.0 32 ............................ TGTGGCTGAACGTGCAACACAAGCAGTTCAGC 6570 28 100.0 32 ............................ TGATCAAACTCTTGACCAGCCTCATGATTCTC 6510 28 100.0 32 ............................ TACAAAAATGACCAAACCATCCGCTTGCCTGC 6450 28 100.0 32 ............................ TTGCATTGCGGCAGTCATAAACAATGAATAGT 6390 28 100.0 32 ............................ AATCAAATTCCGAGTTAGTGATTGACTTATCC 6330 28 100.0 33 ............................ TACAAAAATGACCAAACCATCCGCTTGCCTGCT 6269 28 100.0 32 ............................ GCTTAGGGAAAGCTAATGGATCAGAACAAGTG 6209 28 100.0 32 ............................ AGTTTGTCATGCTGATCTTTCAACACGTAATT 6149 28 100.0 32 ............................ TACAACACCCGATACATCTACCGCAGCATTTG 6089 28 100.0 32 ............................ ATAAGGATCTTTATTATTGCATTGACCCTCTT 6029 28 100.0 32 ............................ ACAAATCAATACATTTATTCTTATGTTTCAGC 5969 28 100.0 32 ............................ GCTCGAAGCTGAAATTGAATTTGAGATGGTTA 5909 28 100.0 32 ............................ TTTTGAGCCAAATTTTAAGATCATGATGTACT 5849 28 100.0 32 ............................ ACATGGACTAAGAACAATGCACTCTTCATTAA 5789 28 100.0 32 ............................ ATTACTTAGACTCCTCAGCTTGGTTTTGCTTA 5729 28 100.0 32 ............................ AGACAAAAGCCATTGTTTAAGCAGTAGTCCGT 5669 28 100.0 32 ............................ TGTTAAAAACGGTGAGGATTCAATGTCTGTTT 5609 28 100.0 32 ............................ TTGCATTGCGGCAGTCATAAACAATGAATAGT 5549 28 100.0 32 ............................ ACGAACACAGGCAGGACAAGACTACATTCAAA 5489 28 100.0 32 ............................ ACTAAAAATAAGGTGCGCGTTGCTTATACTAA 5429 28 100.0 32 ............................ ATCAACCCAAACAACATCTTTTACTACACCTA 5369 28 100.0 32 ............................ TTATGCGCCAGAACTGACACAAGGGCAATTAA 5309 28 100.0 32 ............................ TCATTCCCAATAAATCAGGAAAATAAAATGAC 5249 28 100.0 32 ............................ AAAGAACCTCAAAGCATGATCCTGTTTTAGTG 5189 28 100.0 32 ............................ TCACATTTAGAAATATGAAACGGCAAATATTG 5129 28 100.0 33 ............................ ACCAAAACGAGTGCATGGAATTTCAAAATTAAT 5068 28 100.0 32 ............................ TTCACTTTGGACGGCGTAGGGGCTTCATATAA 5008 28 100.0 32 ............................ CGACCCATCCGAAGCCGAACAAACAGTGGGGC 4948 28 100.0 32 ............................ AGGATTATTTAGTACGAGCGCAAAAGAAAGGC 4888 28 100.0 32 ............................ TCGCAGTTCTGAGTGATGCACTGTGCTTCTCT 4828 28 100.0 32 ............................ TATGCGTCGGTCAAGTCTGAAATCGCAGGAAT 4768 28 100.0 32 ............................ ATTGTGAATATTGAGATGAAGTAGAGACTCAA 4708 28 100.0 32 ............................ TACTTTGTACGTTACACCATCCACATCAAGCT 4648 28 100.0 32 ............................ TCAATCTGAGGGCCTGCCCTTTAATTATCTTT 4588 28 100.0 32 ............................ ATAAGCATGTTCATGACATTTTGGAAGATGGG 4528 28 100.0 32 ............................ ATACTTCGACCATCACCACAAATAATGCCTGT 4468 28 100.0 32 ............................ AAGACGATTGGCATCCAAGAAACCAAGCTGAT 4408 28 100.0 32 ............................ CAATTCGTCTGGTGTAACAACCCCATCTTCCA 4348 28 100.0 32 ............................ ATTTGTCGAATGATGAGCTTACACAGCTTGCA 4288 28 100.0 32 ............................ CTAAAATGATGTATGCAGCAGCGAAATAAGCA 4228 28 100.0 32 ............................ TGATAATTTTATCAGGTTTTTTTATTATAAAA 4168 28 100.0 32 ............................ TCAGTAAAAGTTGATGCTGCGGTTGGTAATTT 4108 28 100.0 32 ............................ ATAAAGGAAATCAAATGAACATGTTGGCTAAA 4048 28 100.0 32 ............................ AATGGTATGAATTGATCCAATATCTGCTAAAT 3988 28 100.0 32 ............................ TTTTTCAACGTCATATACAAGTGGCGAAAAAG 3928 28 100.0 32 ............................ ATAGGAAAATGAATAAGATTTACCTAATAGAT 3868 28 100.0 32 ............................ TGAACCGCTACCAGAGCCGTCACCATCACCAT 3808 28 100.0 32 ............................ AACGCTTGACCCAACTGATCAAAGGCGAATTT 3748 28 100.0 32 ............................ TTACTGGAGAAACTTTCACACATTCAATGAAA 3688 28 100.0 32 ............................ GCTTAAATTGCTCCAAGGTCATAATGTTTATG 3628 28 100.0 32 ............................ AAGAACGTATCCAAAAAATATTTGAACAGAAT 3568 28 100.0 32 ............................ ATGCCCCAGTTGAAAGTTGCTTTAGCTTCCAA 3508 28 100.0 32 ............................ TGAATGTCCCGAGGTTGGTTATCCAATTAATG 3448 28 100.0 32 ............................ ATAAGAAGCAATAAGTTCCATTGCTTCGATAG 3388 28 100.0 32 ............................ CTAAAGGAATGCGATGATTGTCCACCTCCGTT 3328 28 100.0 32 ............................ AAGTTTCCGAAATCATGAAAAAAGGCGGTGTT 3268 28 100.0 32 ............................ TCTATTGAGTTCCTCAAATATTTTCTCTATTG 3208 28 100.0 32 ............................ ACTCAAGGAAGGTCAATGTAACAATAAAGACC 3148 28 100.0 33 ............................ GATTTTTCGGAATAAATTCCGATTATCAGGAAT 3087 28 100.0 32 ............................ ATAAGGATCCTTGTTATTACATTGCCCCTCAA 3027 28 100.0 32 ............................ AAACAGCGAAGCCTATTAATCCAAAGAGAATA 2967 28 100.0 32 ............................ TTTCGCAATCAAACGTGCATGGGGTCAAGTCT 2907 28 100.0 32 ............................ ACCCACAGTTGATAATTCAGCAACTTTATTAA 2847 28 100.0 32 ............................ GTTGCAAATGCATATGTTTTTCGACTAGACGC 2787 28 100.0 32 ............................ TGAGAGACATACGGCAAAATAGTACCCTGTTG 2727 28 100.0 32 ............................ TGCGTAGGAACATACGTTCCTGTACTCGGTAA 2667 28 100.0 33 ............................ ATGCAAATTTAACTTAGAGTTTGAGTTTGACTT 2606 28 100.0 32 ............................ GAAAATATGTTCTACCGTAGATTCGACCAAAA 2546 28 100.0 32 ............................ ATGTCATCATACTGCCGAAACTGCTGATGATA 2486 28 100.0 32 ............................ TAAAGCATCAGAGATTTGTTGCTTGAATCCAG 2426 28 100.0 32 ............................ TGTCGCTCCATCAGTATAAAGTAGCGCATTGA 2366 28 100.0 33 ............................ ATGACTTCATGGAAAGTTGCTGTTGTAACTTTT 2305 28 100.0 32 ............................ GCAGCCATTAATCCAGATATTCAAACTGTTGA 2245 28 100.0 32 ............................ TAACAAATTGAATCCTGACGTTTTGGCATCGG 2185 28 100.0 32 ............................ GCTACCTGAACCATTTCCGCTACCAGAACCGT 2125 28 100.0 32 ............................ GTTGCAAATGCTAAAAGTGTTGCACGGGCAGA 2065 28 100.0 32 ............................ ACTTGCTGGTGGAGCGCTCACGGGACTATTGA 2005 28 100.0 32 ............................ TTTAGCTAAACGGACTTCTGGATTGTTGGATT 1945 28 100.0 32 ............................ GGATGTAAAAAATAATTGCACTGGAACATATT 1885 28 100.0 32 ............................ TGCGCAAATCATGAAACGTAAATTCGATACCT 1825 28 100.0 32 ............................ GATCTGTGCTTTGACTTAAATCAAGATTACCC 1765 28 100.0 33 ............................ ACCAAGTTTATTGACCAACTCAAGCGAATTTAT 1704 28 100.0 32 ............................ AACTGTACTTAGGTATTCACGATACTCTTCTT 1644 28 100.0 32 ............................ GCAATAGGAATACCTTTGGAACGTGCATCGTG 1584 28 100.0 32 ............................ TGATGCCACAGCGAAAATACACACATTTGAAT 1524 28 100.0 32 ............................ TACCACAAATCTTCACTACATAGACCCATACG 1464 28 100.0 32 ............................ TAATTTATCACCCTTGCTCAAGACTGATTATG 1404 28 100.0 32 ............................ TTGTCCCTTTTTCTGAAAATCTAGATACTAGA 1344 28 100.0 32 ............................ GATGTTTATACATACACATATTCGGCGTTTAG 1284 28 100.0 32 ............................ TGAACACATGCTGTATTAGAGAAAGTCAGTTT 1224 28 100.0 32 ............................ TGAAAAACGTAATGCAGAACTCGCCCAGACAA 1164 28 100.0 32 ............................ ATGTATTGAATAACCTCAGCAGCAGTACCGCC 1104 28 100.0 32 ............................ AATCCCTTCAATGACTTTTGAGACAGGAAACC 1044 28 100.0 32 ............................ ACCAGTACCAGATGTACCTCCATTCGAACCTG 984 28 100.0 32 ............................ TGTTCCAGTACCAGTTCCTGAACCATCGCCAC 924 28 100.0 32 ............................ ACGACAATGCATTTTTCATTGTCGATCTGCCA 864 28 96.4 32 ....................T....... GTGCGCTAACAAGTGTACAGATTTTAAAGATG 804 28 100.0 32 ............................ ACATGCGAGCAAATCATCTCTACGCTTATAAA 744 28 100.0 32 ............................ TGAGAAGATCAAACCAAAAATGATACCAACCC 684 28 100.0 32 ............................ TATTTAGGTGCTGCATTCATCATTGCAGGTGT 624 28 100.0 32 ............................ CATATTCGGCGTTTAGTCGAAAAACACATGCA 564 28 100.0 32 ............................ ATTGCATTGAAAACATATTTTGTTGTCTTTTT 504 28 100.0 32 ............................ AGTTCCAGAATTACTATTTCCGTTTTTAGCAA 444 28 100.0 32 ............................ TTTGGCAATGTTAATAAAAGTATTTCATTTCA 384 28 100.0 32 ............................ ATACAACAGTCCTAATCAACCCCAATATACGG 324 28 100.0 32 ............................ TGAAGATAATGAAATTGACTGTAGTGATCTAA 264 28 100.0 32 ............................ ATCCAAAGAAAAAGCGCCTGAGCCTGAAAAAG 204 28 100.0 32 ............................ TGTCGGGGGACGTTCGCAATAAGTACCTGTAC 144 28 100.0 32 ............................ ATATTGGTCAACTTTATAAGCTTTAACTTCGA 84 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 112 28 100.0 32 GTTCATGGCGACATACGCCACTTAGAAA # Left flank : GGCTAGATAATGTTTCA # Right flank : ATAAATTTGAATTCGAATTTATAAGATGGCGTTGTTCATGGCGACATACGCCACTTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGACATACGCCACTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.20,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 3622-49 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKGH01000180.1 Acinetobacter ursingii strain TUM15077 sequence180, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3621 28 100.0 32 ............................ ATGGCGATGAAAGTTTTTTTCGATTCTAGCTA 3561 28 100.0 32 ............................ TTTGCAAAGTAATTGAACGGACGATCACCGTC 3501 28 100.0 32 ............................ ACAACTTCAAAGAAGTCAAATTTCTGGAGCTA 3441 28 100.0 32 ............................ CTTTGAAATTAAACTGGATCTCGTCAGCATTC 3381 28 100.0 32 ............................ AACTGAGCGACTGGAAGCTTTTTCGATACATC 3321 28 100.0 32 ............................ TACTGCCCTGTTATATCCACGGTTTGCACTAG 3261 28 100.0 32 ............................ GATTGCGCCTTGTTCCATTTCTTGTTCAGAAA 3201 28 100.0 32 ............................ GTCAAATGAAAATGCGCCTGAGCCTGAAAAAG 3141 28 100.0 32 ............................ AGTAATAGCAAATATGCTTGAATTAAGATCGA 3081 28 100.0 32 ............................ TTATCAAAACTTCAGTTGCAGCAACGATTGGC 3021 28 100.0 32 ............................ AGCGTGGAATTGGTGGGGTTAAATTGGCGTTA 2961 28 100.0 32 ............................ AAACGAAAGATTTAATAAAAATAGCGCTTATT 2901 28 100.0 32 ............................ GTCCGAGTGACGAATCATTTTGTGCAGCGCAT 2841 28 100.0 32 ............................ AGTGGGTCATTAATTGTCCGTACTGGAGAACT 2781 28 100.0 33 ............................ TGTTGTAAGATATATAGCCATTTTAATTAACCT 2720 28 100.0 32 ............................ TTGTTGAAGATGGTGATAGACCATTTAACTAC 2660 28 100.0 32 ............................ GTAGGGACGCCATTTTCTCCAAAGCTCTGCGT 2600 28 100.0 32 ............................ ATGAAGTTTGATTCATAAGCTTGTCTAAAACC 2540 28 100.0 32 ............................ GAACATTTACATGATGTCCTAAAAAGACTCCC 2480 28 100.0 32 ............................ AGTGGGTCATTAATTGTCCGTACTGGAGAACT 2420 28 100.0 32 ............................ AGAAAATTTAGGCAATAAAAAACCCCGAACAA 2360 28 100.0 32 ............................ GCAAGCGATTACGCAGAGCAATATTATTCTCT 2300 28 100.0 32 ............................ ATAACCAGCCATCGTCTGTTCAATATCATCGA 2240 28 100.0 32 ............................ AGTACACTATTTGGCAAAGCTGCTGCCGAAGA 2180 28 100.0 32 ............................ TCCAACACTGCATCAGTATGTGCATCAGCAAC 2120 28 100.0 32 ............................ TAAATATGATGAAGATGCCAATACTTTGACTT 2060 28 100.0 32 ............................ AAAATCGCTTTGGACAAACTAATTATTATCAA 2000 28 100.0 32 ............................ GCAACTGGATATTTGTACGCGCGTTTCAACAT 1940 28 100.0 32 ............................ GACTTGCAGCATCGGGTCGCTATAGCCAACTT 1880 28 100.0 32 ............................ CCGTGCTTTAGGTAGACGCCTAGCAAGTCGCT 1820 28 100.0 32 ............................ TGTATATTCCGCAATTGCGTTGATCGTGTCAT 1760 28 100.0 32 ............................ TTGGCAAAAGACATACAGCTACACGTGACACT 1700 28 100.0 32 ............................ TCGTTGAGCGGAATTAATTCAAAATATTCTTT 1640 28 100.0 32 ............................ TTTCAGCCGTAGGTGCGGCGACAGTTCCTGCA 1580 28 100.0 32 ............................ GTTAATTAATAAGGCGATAGCGTTATGACTGA 1520 28 100.0 33 ............................ GTTAACTCTTTCTTAACGTTAAATACTGCTGCT 1459 28 100.0 32 ............................ ACCAGAAATGGAAGCTACGAATAAAAGTGCTG 1399 28 100.0 32 ............................ GTTTGATTGGCGAGATCTGCCGAATGGTTCTG 1339 28 100.0 33 ............................ GTTTAACGGTGCATTGCAATATATTTTATTAAT 1278 28 100.0 32 ............................ ATTTGTTGATTTAACTGCTGAACCATACTCAA 1218 28 100.0 32 ............................ TTATGGTTGGCAGCAAAAGAAATCAAACAGGC 1158 28 100.0 32 ............................ CTTGCAAGAATAGTCAAATATAAGCTGCCCCA 1098 28 100.0 32 ............................ TGTTCGATCAGCTTCTTTTTCCAGTGCTTCAA 1038 28 100.0 32 ............................ AATTAAAGGCGGGATTCGATGTTGGTATGTGG 978 28 100.0 32 ............................ AGACTGGAGGCGTCACGGTCATTCTAATTTCT 918 28 100.0 32 ............................ TGCTGCGGTGGTTCGATTCTTTTTCCCATCTG 858 28 100.0 32 ............................ TTTAAAACCTAGCAGCTAACAATTAGTAACCC 798 28 100.0 32 ............................ TCTTTCTCTGCTAAAAAAATAAGAGCTAGTTC 738 28 100.0 32 ............................ CGCCTCGCTAGCTGCTGCGCCCGATGAAAACT 678 28 100.0 33 ............................ TAAGCAGATTTTTGAGCCTGATTCGCTGATGAT 617 28 100.0 32 ............................ AAAATGACACCAGATCAGTACGCTCGCTATTT 557 28 100.0 32 ............................ GAATGAGGATCAGCCAGAAGTTGAAGAGGTTG 497 28 100.0 32 ............................ TGACGACCAGCCTGTCATTTCAGCCATGATCA 437 28 100.0 32 ............................ AAGCATTGAAATTAACAGCGGAACAATCACGC 377 28 100.0 32 ............................ TGAACCGGTCAAGCTCAGTGAAAAAGAGGTGT 317 28 100.0 32 ............................ TAATGCATCGCGCAACACACTTAACTGCGCTG 257 28 100.0 32 ............................ ATATTGAGGATTGATTCATGAATGCAATTATT 197 28 100.0 33 ............................ AAAGATTATTAATAAAGTCTATCTGGTGTTCGT 136 28 100.0 32 ............................ CAACATCGTGTTTTAAATCATGGATATGAACG 76 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 60 28 100.0 32 GTTCATGGCGACATACGCCACTTAGAAA # Left flank : AAAATCATTTGAATGATTTCTTCTTGGTCTACGTGCCATAAAATACTCCATATATTGATGTTTATAACATCATTTGAGGAGCAGAATATCACTTATAGGAGTTGTTCAAATTTACGGATCCATCTCTGTTTCATGGGTGTATATGGC # Right flank : AATATGCATAAATGCATGCATGTTGATAATGGAGTTCATGGCGACATAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGACATACGCCACTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.20,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 21-168 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKGH01000055.1 Acinetobacter ursingii strain TUM15077 sequence055, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 21 28 100.0 32 ............................ AGAAAGACCAAACACGCCGCCACGAATTAAAT 81 28 100.0 32 ............................ TTTAACATAAACAGTTCGACCATCCCATTTCA 141 28 96.4 0 ....................T....... | ========== ====== ====== ====== ============================ ================================ ================== 3 28 98.8 32 GTTCATGGCGACATACGCCACTTAGAAA # Left flank : TACACCAGCAACTGCTGAAAG # Right flank : ATGCAAACGATGTGTAAGAGCTTAAGCTGATTGATTCACGAGAGTAGAATATGGAATCTAATCGCCCGTAAAAATGAGTTAAAAAGAAATAATATAAACAAAAACGAACTGCTTCTGGCGAAACAGTGCGTTAGGTTAATAAGATTATGCTGGTAAATCGAACCAGATCATTTCACTATCTTCAAGTGCATGAATCGTAGTTTTCTCATCAAACAATAAAGCATCACCTGCTTTAACAATTTGATTCTCAATCATAATTTGACCTTTAATCACATGCACATAATTGTGTTTTTGAGTTGCAGCAATCTCAAGTGTTTTACCAGATTCTAACACAGCCGCTTTCACTTCTGCATTTTGGCGAATATGCATAGCAGCATTATCATTTGGTCCTGCAATCAAGTGCCATTGATTTGGCTGTTCACTCGGATCAAGTTTGATTTGTTGATACGTTGGTTCAGCATCGCGTACATTTGGATGAATCCAGATTTGAAACAGATGCA # Questionable array : NO Score: 5.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGACATACGCCACTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [18.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //