Array 1 45555-48941 **** Predicted by CRISPRDetect 2.4 *** >NZ_WPOM01000017.1 Eggerthella lenta strain ResAG-88 ResAG88_contig_017, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 45555 33 100.0 36 ................................. GAGCGGGACTGCGCCGAGGCTGTCTACGACGCCAAC 45624 33 100.0 36 ................................. CAGCGGCGCTGGCATGGATTATTGCGACTTGGGCAC 45693 33 100.0 34 ................................. CCGTTTTGTCTGCCCTGGGACTTGGTGGAGCTTG 45760 33 100.0 33 ................................. CGAGGAGTTTCGCCCCTATCGCGATCCGTCCGC 45826 33 100.0 35 ................................. TTCCTGCACGCAGAGGGCGGGCCGCGCACGTGGTG 45894 33 100.0 33 ................................. TGCACACCCTTGCCGAAGATGCTCAGCATCGGG 45960 33 100.0 35 ................................. ACGTTGACCTACGCTGAGAACATGCAGGACAATTC 46028 33 100.0 34 ................................. TCGGCAAATCTGGGACGCTGGAAGCCGCTGAGGC 46095 33 100.0 35 ................................. GAGCTCAAGCTCAAGAAGTGGCGCAAGCAGACCTC 46163 33 100.0 36 ................................. CGGATCGTACAACACGGCAAGCGCGCTGTGGGGCGC 46232 33 100.0 37 ................................. TTGCCGACGTGCTGGACGGCTACAACCGCACCCACGA 46302 33 100.0 33 ................................. AGCCTCTTTTCGCTCGTCGCGTTCGTCGAGCTG 46368 33 100.0 33 ................................. TAAACGAACTTGAACAGACGCATTTTGATAACC 46434 33 100.0 32 ................................. GAGTTCGTTACCGACACGACCGGCCTCATCGG 46499 33 100.0 34 ................................. GAGCTCGCCTGTGTACCCGTCGTTGGTGACGATG 46566 33 100.0 34 ................................. ACGTTGCCCGGATCGAGCTTGAGCGCGCGCTCGA 46633 33 100.0 34 ................................. ACGTTGACCTACGCTGAGAACATGCAGGACAATT 46700 33 100.0 32 ................................. AGCCCTCGCTCGCAGCCTCGTAGCGAAGCCTG 46765 33 100.0 34 ................................. AGCATCTCGAATTTCGCGGCGAGCGATTCGTTGC 46832 33 100.0 35 ................................. AAGGCCGCCAACGCCAAGTACAGCCTGGAGGAGAC 46900 33 97.0 33 ........T........................ AAAGCAGTCATCACAACGAGAGAAAGGGGCATC 46966 33 100.0 34 ................................. ACGTCGTGTCTGAGCATCGACATCACAACGTCTT 47033 33 100.0 32 ................................. ATTGCCGTTTTTCAAGGCTGGTAGCAAGCAAG 47098 33 100.0 34 ................................. GTGCCGGCAGCTCCCGCAGCAGCGGCCCCTGCGG 47165 33 100.0 33 ................................. AGGTACGCGCGCGCCCTTCTCGGTCTTGTAGTC 47231 33 100.0 35 ................................. TCGACGACGGCCCTCACGTCGTCGATGGTGCGGCC 47299 33 100.0 34 ................................. TATCACATGGAGCGGACGAGGTTCTCCGCGCGAG 47366 33 100.0 34 ................................. ATCTTGGGCGTGCCGGGAGCGGGCAAGAGCTTCA 47433 33 100.0 34 ................................. ATGGCGAGTACTTGGACGTAGTTGACGGTCGCCG 47500 33 100.0 35 ................................. GACTTGGCGTCGGCCGCGGCGCCGGACAGCGCCTC 47568 33 100.0 33 ................................. GACAACGCGATGGCCAAGGTATCGACCATCGCG 47634 33 100.0 33 ................................. CGCGCCACAGAAGGCGCACCTTGCGGGTATCGG 47700 33 100.0 33 ................................. GGAGAAACATATAAAAAGGACGGTGTAATCTCG 47766 33 100.0 35 ................................. CAGTTGATGTCTTTTCGCAGGTCGATGGCGCACGC 47834 33 100.0 34 ................................. AAGCCGACGAATACGCCGGCGAACGCCATTCAGC 47901 33 100.0 25 ................................. AGGCCCTGTCGGCCCGGTCGGCCCT Deletion [47959] 47959 33 90.9 34 ...GGC........................... ATGTCGGCCTTGGTGAACTCGGACAGGTCGAAGC 48026 33 100.0 33 ................................. ATGCTACTAGACGATTTTTTTGTTCCGAAATTG 48092 33 100.0 35 ................................. ATGATGACCACCGACTCGTCCGCGGTTCCGTAGAA 48160 33 100.0 35 ................................. TAACAGACCGAAGCCCGTCCGGGCGGGTCGAATAC 48228 33 100.0 35 ................................. CATGTGTTGCGTCCTACCGCGTCACTGATGATGCC 48296 33 100.0 34 ................................. ATCGTGTGCGGGACGAACGACGACAAGCTGGACG 48363 33 100.0 34 ................................. GAGGACGGTGTGGATCCATTACGACATCACCGGG 48430 33 100.0 37 ................................. GAAAAGCTGCACCGGCGTGCCGACCGTGATGCCGTTA 48500 33 100.0 36 ................................. GGCACTGACGTGAACGAAAGCGTCAAGGCTGCAAAC 48569 33 100.0 33 ................................. CCCACCGCGATCACCCAGAACGTCGAGTACCTG 48635 33 97.0 33 .............C................... ATGTCGGGGAAAAGGCGCGAACCCATGTAGGCG 48701 33 100.0 38 ................................. CAGGTAGGCGTTGACGGCCTTGTCGTTGGCCTCGGCCA 48772 33 90.9 36 ..T...T...................G...... GGCACCGCGGTGTACTCCGTGCTCGAGAACGCGCGG 48841 32 93.9 34 ..............-.................C TGTTCGGGTTGGCTGGCAAGCTGAACGCTGACAC 48907 33 75.8 0 .....GTT.A..T.....C.C..........G. | T,C [48911,48923] ========== ====== ====== ====== ================================= ====================================== ================== 51 33 98.9 34 GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Left flank : TGCGCGGCGATCTAGATGGCTACCCGCCGTTTCTATGGAAGTGAGATGGTTGGCATGCTGACAGTGATTACCTACGACGTGAATACCGAGGATCCGGCGGGCCGACGTCGCTTGCGAAAAGTGGCGCGACATTGCGTCAATTACGGTCAGCGTGTCCAGAACTCAGTGTTCGAATGCGTTGCCGATGCTGCGACGATGGTTCGTATCAAGAGCGAGCTCGTCGAGCTGATCGATCCGGAGAAAGATAGTTTGCGATTCTACAGTCTTGGAAGCAAATATGAGACGAAGATTGAGCATGTAGGTGCGAAGCCAACGTACGAAGCTGAAGGGTTCTTGGCATTGTAGGACCATGGTGCGAGCACGAAGCTCGCATATGACATACGTGAGGTTCGCACCAAATAGTGTGACATAAAGATGCCTGACGCGCTTGTTGCGTGTACCTTGTTTGTCTAATGACACTATATGTTGATCGAAGCAGTAAATTTGCACATAATATTGCG # Right flank : TCGCGCGCAGCTGTCGTGGTACGGCCGAGGCGTGGTCGGTCGTACCCCTCGCGGGCGCGCGGGTAGAAGCAGGGTATCCGGGTTGAAATCGAGCAGCGTTTCGGCAGGTTCTGTCGCTCCCTAACGAAGGGGCGACCGATCCTTGCCGTCGCTTCCTATCGAGAACGCGGATTGATTCGCTGATTCCGAGTTTTGCTCGTCGGACGTCTGCGCCGAGTTGCGAAAGGCGCAGACGTCCTTCGGATCGCTACTCCACCACCAAATCAACGAACTCAAACGTCGTGCAGTCAACCAGGCCGCGGTTCGTCAGGCGCAGTTCGGGCAGGCATGCTAGCGGGATCAGGGCCATCGTCATGAACGGCGACGGCATGGTGCAGCCGATCTCGGCCCATGCGCCCTCCAAAGCATGTACCTTCTCGCTCATCGTTACGGCGTCGAGCGAGTCCATCAAACCGGCGATAGGAAGCTCCACCAACCCCAGGATCTCCCCGTCGGCGACC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.10,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //