Array 1 663549-664859 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LT962680.1 Clostridium sp. SN20, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	=================================	====================================	==================
    663549	    33	 100.0	    34	.................................	TGGCGCTCCACGGCGTCCACAAGTGTTTCCAGCG  	
    663616	    33	 100.0	    34	.................................	TCGGAACAGAACTGATGGCGGCCCGCGATGAATC  	
    663683	    33	 100.0	    33	.................................	AGGGCAATGTCCGTAAACTTGTTGTATCCTGTC   	
    663749	    33	 100.0	    34	.................................	AAATTCGCTTTCGGTAATAGCGCCCATGTCCAAA  	
    663816	    33	 100.0	    34	.................................	CCCTGCTATACTGAGTATGTCGAAAGACACAGCG  	
    663883	    33	 100.0	    34	.................................	TCTTATACTGAGGTCTTTTATCTCGTTTAAACCC  	
    663950	    33	 100.0	    33	.................................	GGCAATGTCCCGCTCAGTTACACCGGCAACCAG   	
    664016	    33	 100.0	    35	.................................	TTCCTGGGGAAGGTGCGGGAGGCGGGAAACGGGAA 	
    664084	    33	 100.0	    34	.................................	TTTAATGTGGTCGGCAGAGTGACCCAGAACGTCC  	
    664151	    33	 100.0	    35	.................................	ATTTCTCTCGTGCTGTTCTGACGAGGTCATGCCAC 	
    664219	    33	 100.0	    36	.................................	ATAGAAGTCACCCTTAAAGGTAGTTGAAGTGCCTAT	
    664288	    33	 100.0	    33	.................................	ATGTTTCACACGATGCTCTCGCATTTTACACTG   	
    664354	    33	 100.0	    34	.................................	CCGCCGGGGAAATCCCCCGTGCGAGACAAGCGGC  	
    664421	    33	 100.0	    35	.................................	CTCACTGTCCGGGATGAGGCGCAGCCCCATGCGCA 	
    664489	    33	 100.0	    36	.................................	CCGGATGACCTTCAGCCGGGCCAGCTTGGGTGCGGA	
    664558	    33	 100.0	    34	.................................	TTCAAATGGATTCGGGATAAGTCCAGCACGCCGT  	
    664625	    33	 100.0	    36	.................................	CGTCGTGGGAGGATGTTCTGGCCGCTGGAAAGAAGC	
    664694	    33	  90.9	    34	..T.........T.......T............	CAACAGCAGCAGAGAGGTAGGCGCAAGCCCCGGC  	
    664761	    33	  93.9	    33	.........T..T....................	AACTTGTGGCTACGGCAGCCCTCCCGAACCAAC   	
    664827	    32	  78.8	     0	............T....A.....-..CAC...G	|                                   	A [664848]
==========	======	======	======	=================================	====================================	==================
        20	    33	  98.2	    34	GTCGCTCCCCACACGGGGAGCGTGGATTGAAAT	                                    	       

# Left flank :   GGTGACCTGAAGGCCTATCCACCCTTTTTGTGGAAGTGAGGATGCTATGCTGGTACTGATCACATACGATGTCAATACAGCAGATGCCGCCGGACGCAGGCGTCTGCGCCAAATTGCCAGGCAATGTGTCAACTATGGGCAGCGGGTCCAATGCTCGGTATTTGAATGCCTGCTGGATTCGGCCCAATGCAAACTGCTGCAGGCAAAGCTGCTTTCCATTATTGATCAGGAAAAAGACAGTCTGCGCTTTTATTATCTTGGGAAACAATATGAAAACAAAATTGAGCACTTTGGCTGTAAATCCTCTTATCTCCCGGAAGAGCCGTTGATTCTATAATGGTGCGAAGAGACAGCAGTCACATATTCCCCTGGAGGTTCGCACTGGAATAGAGCCCTTTCTTGCAGCGCGGAAGCAGTGTCGTCTGACAAAACTTACTCAGATACGCTAAATTTTATCTAAGTTCTATAAGTTTACAGGTGTGTATTTGTACATATCTGCT
# Right flank :  GGCCCCCTGATGTAGTCTATTTTCCTACATCAGGGGGCCTTGTCATAGAAAGATGATTGACCACTATATCCACTTTTCCAATTATGAACGCGTTCCAGCTAAAAATGAAAGAGACAAATGGCTCATCTTTTACATCAAAACCTTTGTCACACTCCCAGCGCTTACTTCGCCGCGCCGGCCACACTTCCCTCTTCGGCCGCAGAGAGAAAGTCCAGCTGCTCCTTGCTGAGCTGGATCTTCAGGGTCCCCATTGCCTCTTCAAACTGGGCCATATTTGTGGTGGTGACCAGCGGAATGGCGGCCGGATCTTGGTGCATGAGCCAGTAGTAGACGATCTGAACCTTGCTGTACCCCGTCTCTCTGGCCACCCGATCCAGCGCCGCCAGACGTGCCTGGGCATCTGCTCCAACATACTGGGCCATAAAGGGCTTCTCCGGATTGACATAGGCGCCCTTCAGCAGAGGGCAGTAGGCCAGCAGTGTGATCCCCGTATCCCGGAT

# Questionable array : NO	 Score: 9.17
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCTCCCCACACGGGGAGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     F [7,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCGCTCCCCATCCGGGGAGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-8.50,-8.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-13] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [71.7-53.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [10.05,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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