Array 1 993557-999289 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065700.1 Atlantibacter hermannii strain FDAARGOS_888 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 993557 29 100.0 32 ............................. TTTTAAAACAGGATGTGGCCCGCCTGGTGCTG 993618 29 100.0 32 ............................. CAGTGCGGACTGCTGATCGCTTAGTTGATCTG 993679 29 100.0 32 ............................. GAAATGTGGACCAGCGGAAAAAATATCTACTT 993740 29 100.0 33 ............................. AGGTCGGGCATAGTTATTACGACCCGTCCAGCC 993802 29 96.6 32 ............................A TTTATGATCGGTGATATCACGGCCTGGCGAGC 993863 29 100.0 32 ............................. TTTTTGCTGATGCTGATGATATTGAGGCCCAC 993924 29 100.0 32 ............................. AGGCAACTATGGAGCTACACGGCGTTAAAACG 993985 29 100.0 32 ............................. TTGATTTAGAGCAACTTTTGTATCTGCCAATG 994046 29 100.0 32 ............................. GCAACCCGTGGCGTCGTCCATATTCATGAACA 994107 29 100.0 32 ............................. GCGAATATTCAGGTTAATGCGCTGCCGTTTCG 994168 29 100.0 32 ............................. GTAAATATCATGGCTGAGAAATTATTCGGCAC 994229 29 100.0 32 ............................. GTTTTTACACGTCCAGCGACGCACACGCACAA 994290 29 100.0 32 ............................. TGACCGATTCGGCAGGGACAATGAAGCAGGGC 994351 29 100.0 32 ............................. GTGACACGTCAACCGGTGTCACCTAGCACAGT 994412 29 100.0 32 ............................. ACGGAAATATTAGACCCGTGGCGATTAGCTGA 994473 29 100.0 32 ............................. GATCGGAATATAGTCAGTGCCATCCTCCGTGG 994534 29 100.0 32 ............................. CCCCGGTCACGGAACCGTCACTGGCTGCGGCG 994595 29 100.0 32 ............................. TTTTAACGGGTTTTATTGACCAGACTCCTATC 994656 29 100.0 32 ............................. CGCTCGCACTCTATTGGCGTAAGGCGACGCAC 994717 29 100.0 32 ............................. CAATTGATTACAAAATCGGGATAGGCGGCATG 994778 29 100.0 32 ............................. GTGGGCCCGTTTGTTTTGGGGGCTTCCGATAG 994839 29 100.0 50 ............................. ACCCGTATTAGCCGCGTAGTTAGCGCGTACAGCGTGTTCCCCGCGCCAGC 994918 29 100.0 32 ............................. ATGCTGACGGTAACGTTATTGACGATCAGGTA 994979 29 100.0 32 ............................. GGCCGCGCCGCGAATATCGAGATGCATAAACG 995040 29 100.0 32 ............................. ATAAATTTGGCCCCGGAAAAAATGGATTTCGC 995101 29 100.0 32 ............................. CCACATTAAAAAATAAATCCACCGGCGTTTAA 995162 29 100.0 32 ............................. CAATTCTTCGAGTTTCGCCAGTTTGTTGGCGC 995223 29 100.0 32 ............................. ATCCGTATTGCATATGGATGTCGGACTTCGCC 995284 29 100.0 32 ............................. GCGACGACTAAAAACGGGGTGGCAGGGTGACA 995345 29 100.0 32 ............................. CCTTTTCCCACGGCCATGTTTTCGGCACTGGA 995406 29 100.0 32 ............................. AACCCGTTTGATGGCATCGACTTTCTGAAGAA 995467 29 100.0 32 ............................. GCTATCGACATTAATGCCCAGCGCTTTTGCAT 995528 29 100.0 32 ............................. CGCTTTCCTCCCTGCATAAATTGCAGGTAACA 995589 29 100.0 32 ............................. CCATTACTTCGCGGTACTCAGAAAATAATTAA 995650 29 100.0 32 ............................. TTCAGGAATGATTTTTTTCCACCGCGTGACGG 995711 29 100.0 32 ............................. AAAAAATAAATCTTTTTATATCAATAAATTAA 995772 29 100.0 32 ............................. AAGAACACCAGGCGCGCAAGGATGGCTCGTAC 995833 29 96.6 32 ............................A ACAGTTGATCCCTCCTGACGAGGTCCAGCCCC 995894 29 100.0 32 ............................. GCAATGCAGCAGTCATGATGCTGCCCCGAGTC 995955 29 100.0 32 ............................. GAGACTACAATGCCGCGCTTATCAGATATCCG 996016 29 100.0 33 ............................. GTCGATATGCTTCGCCGGGTCGTAAGCATTCGC 996078 29 100.0 32 ............................. CGCTTCATCGCCATGTAATTAACGCGACGAAT 996139 29 100.0 32 ............................. CGTTAGCGTTTGATACTCCCAACTGTACCCAG 996200 29 100.0 32 ............................. CCAGGCACCATTGCAGCGATTGAGTAGAGTTT 996261 29 100.0 32 ............................. AGATCAGGGAGCTATCCGGGCAGAGCGGCCAG 996322 29 100.0 32 ............................. CTCAGAACTGCGCAGGCCGGTATTGAAAGCGA 996383 29 100.0 32 ............................. CGCCAAAATGCCACATTTGCGGGGCTGAAATG 996444 29 100.0 32 ............................. CAACTCCTTGTAATCGACGACATGAGCGCCGA 996505 29 100.0 32 ............................. TAATAGACGCACTTTCAAAGCCTGGCTGGGCC 996566 29 100.0 32 ............................. CTGATGCGCGAAACGTTCAAAGAGGCTAAATC 996627 29 100.0 32 ............................. TTCGTTGATATGCTGGCGGATAATTACGCCGC 996688 29 100.0 32 ............................. ACTCCCCGGTGTTGCTGGACCACGTTGCAATT 996749 29 100.0 32 ............................. ATTCCCAGCCAAACTTTTTCGCGTACGCTTCC 996810 29 100.0 32 ............................. TCTTCATTACTTGAGGCTTCACACGCTTTGGA 996871 29 100.0 32 ............................. TTGCGATGCTTACAAATGGCGCGTGTGTCGTG 996932 29 100.0 32 ............................. GCTTTCCCGACCGCTGGCAAACTGAAACGAGG 996993 29 100.0 32 ............................. GGCTATGCGATTGGCTTTAACTGGCACGACGT 997054 29 100.0 32 ............................. GGCTATGCGATTGGCTTTAACTGGCACGACGT 997115 29 100.0 32 ............................. GGCTATGCGATTGGCTTTAACTGGCACGACGT 997176 29 100.0 32 ............................. CCCGGAGACAATCTCGTCCGGCAGTTGCGCGG 997237 29 100.0 32 ............................. GCGGCGACATTCTCATGGTCGGTAACGACAAA 997298 29 100.0 33 ............................. CGCCGCGTCTACACCTTCAGCAATCTGGCCACC 997360 29 100.0 32 ............................. CATTCGAGTACATCGCCGGCGCTAACTCATCC 997421 29 100.0 32 ............................. CGGCTGTGTCCGTCACGCCCCTGACTTTTAGG 997482 29 100.0 32 ............................. CCGTGCCGATTTCGATTAACTGATCTTTGTTC 997543 29 100.0 32 ............................. CGCTGCAAAACAATGAGGGAATCTGGAGAGGG 997604 29 100.0 32 ............................. ATGCGCTCTACAACTGACATGCCCCATCCATT 997665 29 100.0 32 ............................. TTCAGGCGCACGGCTCCCGATTAGAACAGCTA 997726 29 100.0 42 ............................. CGCAAAAATTCGTATGCCGTGCATACCGGCTGTGCCGATGAG 997797 29 100.0 32 ............................. CCAATATTCTCGAATTTAATGGCGTATGAAAC 997858 29 100.0 32 ............................. ATGGATAGGCATAGCCAGCACCGATTTTAACT 997919 29 100.0 32 ............................. TTTGGCTGGGAATCTTCGCTGACAGAGATTAT 997980 29 100.0 32 ............................. TTTTTCCGGGGAACGCGCTGACCGGCAGCAGC 998041 29 100.0 32 ............................. CAAACCGGGAATTTTCACCCAACGCAAAAGCC 998102 29 100.0 32 ............................. GGCTTTCTGGTTTTACCGGGGCCCTGCCTAAC 998163 29 100.0 32 ............................. CTCAGCATCTGGCGTTTTCTTCATGGGTAAAC 998224 29 100.0 32 ............................. GACTCCAAAGAGTTTGCCGGCCACATTAAAGA 998285 29 100.0 32 ............................. ATACCCTTGCCCGGTTGATGCGTCGGTGAATA 998346 29 100.0 32 ............................. GCAGAAGACGGCCATCGGACAGCGCCGCCGTC 998407 29 100.0 32 ............................. CCTATTGAACGCGCGTTCGGCGTGGGTGGACT 998468 29 100.0 32 ............................. CGCTGACGTTTTAATGCTCGTCCACCCATCTT 998529 29 100.0 32 ............................. ACGTCGCCACTTCGCGCCGTATGGGTTTGGTA 998590 29 100.0 32 ............................. CGGCGCGGCTTATACAGCAGGAGCTACAGAAA 998651 29 100.0 32 ............................. TGATAACGCTTAGAAAGGCCGGAATAACCATA 998712 29 100.0 32 ............................. CGATTAAATGTCCAGCTTGTCCCTGGTTGTCG 998773 29 100.0 32 ............................. CAATCGGCATTGTGCAAAGTGACAGAATCAGT 998834 29 100.0 32 ............................. TCAGAGTTTGATCGGGCGCAAGCCGCCGCCAA 998895 29 100.0 32 ............................. CTCCTGCTCTTTCTCGGATTGCTCATCGACCC 998956 29 96.6 32 A............................ CCCTATCGTTTTGCCGGTGCGTGCTGGCCCAA 999017 29 100.0 32 ............................. CTCCGGGTAGGCGATCATCCGTATCTTGCCTG 999078 29 100.0 32 ............................. TCATAATGGCTGAAGGGGATTGCGAGCCGTGT 999139 29 100.0 32 ............................. AAATCATGTGCCGCGCCGTTGGCGACACATCC 999200 29 100.0 32 ............................. AAGGGACGCCGCTGGCTGGTGGATGAATCCGC 999261 29 93.1 0 ..............C.....A........ | ========== ====== ====== ====== ============================= ================================================== ================== 94 29 99.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TCTGATAGAGGATGTCTTAGCTGCAGGTGAGATCGCGCCACCTGAACCACCGCCCGATGCACAACCCGTGGCAATTCCACTTCCAGTGTCGCTCGGCGACGCAGGGCACCGGAGCGCATGATATGAGCATGCTGGTGGTTGTAACAGAAAACGTACCGCCACGGCTGAGAGGTCGTATGGCGATATGGTTACTGGAAGTTAGGGCAGGGGTCTATGTGGGTGATGTTTCTACGCGTATCCGGGAAATGATATGGCAGCAGATAACATCACTGGCCGATGAGGGAAATGTTGTTATGGCTTGGGCAACTAATACTGAATCAGGCTTTGAATTTCAAACCTGGGGAAAAAATCGACGTGTTCCGGTAGATTTCGACGGGCTGCGTTTAGTCACGTTTCTGCCCGTTAATAATCAATAAGTTAGCGTTCTTTAAAAAAATGGAAAAGTTGGTGGTTTTTTTAATGGCAAAAAAATCTATATAATACAGATGTATAGCTTTAGA # Right flank : GAACATCTCAAGCCGCCCCCACATCCCCCAGCCATCACACCCTTTGTTTCTTACTCGCACCCGGTATAAACTTCTAAAACCTTCCATCTAAAGGAAGGTTGCGGAGGTAATATGAATATAAGTGATGTCGCGAAAAAAACCGGGTTAACCAGTAAGGCGATTCGTTTTTATGAAGAGAAAGGGCTGGTGACGCCGCCGCTGCGCAGTGAAAACGGTTATCGCAGTTACACGCAAAGCCACCTTGATGAGTTAACGCTGCTGCGCCAGGCGCGCCAGGTGGGGTTTAATCTCGAAGAGTGCAAAGAGCTGGTCCATCTGTTTAACGATCCCGATCGCCGAAGTGCCGATGTAAAAGCGCGTACGCTGCAAAAAGTGGCGGAGATCGAACGGCATATCGTAGAGCTTAACGACATGCGCGCACAGCTGCTGGCGCTCGCGGAATCGTGCCCGGGTGATGACGGCGCCGACTGTCCTATCATGGATAACCTGTCCGGCTGCTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //