Array 1 1182302-1180237 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045483.1 Stygiolobus azoricus strain FC6 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ===================================== ================== 1182301 24 100.0 34 ........................ TCACAAGATCTTTCTTTTCTTCAACAAGTTTCCA 1182243 24 100.0 34 ........................ GAGCTACGAAGTAAACATCACTAACAATGTTCCA 1182185 24 100.0 34 ........................ TAAATTTCGGTGGAATAGACTGTTTCTTTGACGG 1182127 24 100.0 37 ........................ CAAAGCTTAGTTCCTACATGAGCATGATGTGCCTCAT 1182066 24 100.0 34 ........................ AGGCACCATAACCACCGATAGTAGTGCCATAAGT 1182008 24 100.0 34 ........................ TCCAGGTTAGTTAGCAATCTATCGTCAAACTTTA 1181950 24 100.0 35 ........................ AAAATGGAACTAAAAATAAAATACGAAGAAGATCA 1181891 24 100.0 34 ........................ ATCCCCATTATTTAATTATGCTAAAGGGATATTT 1181833 24 100.0 34 ........................ AACTCTTTTTGTGATAATATTTTTCCCTCCTCTA 1181775 24 100.0 34 ........................ AACTCTTTTTGTGATAATATTTTTCCCTCCTCTA 1181717 24 100.0 34 ........................ AACTCTTTTTGTGATAATATTTTTCCCTCCTCTA 1181659 24 100.0 34 ........................ AACTCTTTTTGTGATAATATTTTTCCCTCCTCTA 1181601 24 100.0 34 ........................ AACTCTTTTTGTGATAATATTTTTCCCTCCTCTA 1181543 24 100.0 34 ........................ AACTCTTTTTGTGATAATATTTTTCCCTCCTCTA 1181485 24 100.0 34 ........................ AACTCTTTTTGTGATAATATTTTTCCCTCCTCTA 1181427 24 100.0 34 ........................ AACTCTTTTTGTGATAATATTTTTCCCTCCTCTA 1181369 24 100.0 35 ........................ TAAGCTTCTTAGCATCAAAACGATTGTGAAGATTA 1181310 24 100.0 36 ........................ CTAGTATGAAATTAAAACCACGTAGCAGACCATACA 1181250 24 100.0 35 ........................ AATTTTTTGAACATACTTTTCTTTTTGCCATTCGT 1181191 24 100.0 34 ........................ TTGCACTGAATAGTACATCCTTTGTTATCAGTTC 1181133 24 100.0 34 ........................ TTACAAGATGCACTTACTGATGCCGCTAATAGGT 1181075 24 100.0 34 ........................ TCCTCCGCATTATACAGCAAATCCTTGAGTAAAT 1181017 24 100.0 35 ........................ TTACTCGTCGCCAGTGAAAACGTCATCGTTATTAT 1180958 24 100.0 34 ........................ TTATATATTCAGGTATTTGTTGTATTTGGGATTC 1180900 24 100.0 36 ........................ GGGTCATCCTTATTGGCGATCTTACTGGCGATAAGA 1180840 24 100.0 34 ........................ CATAAGTTCCTTGCCACACAATCTACATTTAATC 1180782 24 100.0 35 ........................ CCTGGACAATTTACTGGAATTCCTTTCTCCTCAGG 1180723 24 100.0 34 ........................ TCAATCCCAAAGAAAGTTGGAACATTGAGCATTT 1180665 24 100.0 35 ........................ TAACCCACTCCAATACCTCAAGCATATCATGTTTC 1180606 24 100.0 34 ........................ CTTTCTATAGCTAACATACCCCATATACTTGTAT 1180548 24 100.0 35 ........................ AACTCCAGAACTCCGAATAACATACTGTCTCACTT 1180489 24 100.0 35 ........................ ATGCTTACTCTTGTTTAGTCTATCAGTCACAAGGA 1180430 24 95.8 30 .................T...... ATTTTACCCGATATTGGGTGGTGTAACAGT 1180376 24 95.8 35 .................T...... TCCAACGCTTCTCTCACAGATAGCTTTCCAGCAAG 1180317 24 95.8 31 ................T....... TTAATTTCCACGCTAGAAGATTCTAATATCT 1180262 24 79.2 0 ..A....A......A.C..T.... | G,A [1180239,1180251] ========== ====== ====== ====== ======================== ===================================== ================== 36 24 99.1 34 GTCGAAATAAGGAAGAACTGAAAG # Left flank : AAAGAGGTAAAACTAGTTGAATAGTAGGAATCTTTCTATTTATAGTTAATTTAAGATCTTTTCTTCTTAGCATTATTCTTCTATTCTACAAACACTTTATACACGTTAATAGAAAGGTTTATTACCTAGTTTAAATTATCTCAGATTAATTCGAAAAATACTTTGTGAATTCAAAGTCTAGTACTGTTCTTGTCTTTTTATTTGTTAATAATCATTTTATACTCCTCAAAATGAGGGAGGAGTAAAAATTCTAGTCAAACAGATGTCATTTTTACTGTTGAAATTGACGACTTAACTTTTAGGCATTCTACAGAGTTTAAATAGGGGTTATTAATTTTACTGTTGAAACGAGTACGTAAAAATAAGGGGGTTAATGATAGTTTCTACACTCAACCCCCTTAATCACTGTTGAAAAGCAACGCTTATTACTTACTACTTCTACACTATCAGTAGAGAATAGTGTAAAATGAAGGAAAGAAAGGACGTAGGGGCGAGGCACG # Right flank : CTGAGATATTTCCACGATAGGACTATACCGATTCCGGATAGGATTATGGCAAACACAACGAGGTAAATGAAGTCTATTGTTAGGTTTGTTTGTATACCTAGTAGCATATCCCTTATTACTGCATTTGAATAAGTTAACGGGTTTACCTCAGCAACTGGCTTTAACCAGGAGGGCATCGACTTTATAGGATAAAACGCGTTGCTGGTAAATAGTAACGGTAGATTGAGTAGGTTCATCACAGACATTTGAGACTGCCATGAGGTTGCTCTAATGGCAATTACTAAGAAGAGGGAGGAAAGTCCGAAGGACATCAGGAATAGAGCGGCGTAAGCTCCTAGAAAGTCAAAGACGTTTATTCCAGGGTAAAAGGACATCCCTAACAGCACTGCTACAGCTAATACGATAGTAGCCTGTACTAATGACCTGATCACAGAAGACAAGACTTTGCTCATGATTATGTTACCCCTCGGTACTGGGGTTGTTAAAAGCCTATCCAATAC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAATAAGGAAGAACTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.50%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 2 1201694-1202013 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045483.1 Stygiolobus azoricus strain FC6 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ==================================== ================== 1201694 25 100.0 34 ......................... GCAAGGAGATATTTCATATAAAATTCTTGACTTA 1201753 25 100.0 34 ......................... ATTTTGGTCAAAGATAACAAATGTCTTGTGGATG 1201812 25 100.0 36 ......................... TTCTTTCTAAGCGTTTTTCCGCTACGTGGTTTTAAT 1201873 25 100.0 33 ......................... CGGTTCTGGAGCTACAAGGCACGCAGGAGAATA 1201931 25 96.0 33 A........................ AGAGAGAGTGAGTTGGTATGAAAAGAGAAAAGT 1201989 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= ==================================== ================== 6 25 99.3 34 TCTTTCAGTTCTTCCTTATTTCGAC # Left flank : AATCTAGAGTCAAAGTCAGATGAATTACAGAGGTTCATCGCAATGCTCAACTGCCCAATAGAGAGGTTATATGGTAGTGAGTACTTCGCTTCTGCAGTGACTTTCTCCGACACGTTAATAGACGCGGGGATCAACTTGAGGACACACGCAGTAATCGACAGAGTGACCGGAGGAGTGAGGGAACAACACTTGTTTAAGGAAGAGATAGTAGATGTGAAGAGCGTAAGCGCAAAGGTTATTGTCAGGGATGGGATTAAAGAGTGGTTAGAGACCTTAAAGTTTCTGAGCCAAGTAGGGACTTTCATAGGTGGTGGGAAGTCGAGAGGAATAGGTTATGCCGCATTGGACTTAAAGGAGAGCGAGTACGCTAAAATTGACAGCCTCACCGGAAGGCCTAAATTCCAACCGTTGAGCGACATTATTAAGGGATAGTTACTCTTTTTTTCTTTCTTTCTCCTACTTCTTGTCCTACTCCCACTCTTTTTACCACAGACCAGAAA # Right flank : CCGTGCCTCGCCCCTACGTCCTTTCTTTCCTTCATTTTACACTATTCTCTACTAGTAGTGTAGAAATAGTAAGTAATAAGCGTTGCTTTTCAACAGTGATTAAGGGGGTTAAGTGTAGAAACTATCATTAACCCCTTATTTTTACGTACTTGTTTCAACAGTAAAATTAATAACCCCTATTTAAACTCTGTAGAAGTCGTAAATCGGGTTAGGCTGTTTTCAACAGTAAAAATGACATCTGTTTGACTAGAATTTTTACTCCTCCCTCATTTTGAGGAGTATAAAATGATTATTAACAAATAAAAAGACAAGAACAGTACTAGACTTTGAATTCACAAAGTATTTTTCAAATTAATCTGAGATAATTTAAACTATCTAATAAACCTTTCTATTAACGTGTGTAAAGTGTTTGTAGAATAGAAGAATAATGCTAAGAGTAGATGATTTTTAATTTATACAAATAGAAAATTCTTATAATTCTACTAGTTTTTCCTTTTTTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCTTTCAGTTCTTCCTTATTTCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 3 1211523-1211954 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045483.1 Stygiolobus azoricus strain FC6 chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== =================================== ================== 1211523 24 95.8 34 .............T.......... TTTATAGAGGATACGGTAAGAAGGCCTATAGTCA 1211581 24 95.8 35 .............T.......... AGAAAAGTTAGAGACAAGCAAAATTATGGAGTTAA 1211640 24 100.0 35 ........................ GAATGCAAATATATTGATGATATTAAATGAAATAA 1211699 24 100.0 34 ........................ TAAGAGTTCTAAAATACGAGTTCGATGCTCAGCA 1211757 24 100.0 34 ........................ CAATCCTTCTGTACCGGAGGTATACCGCCGGTGT 1211815 24 100.0 34 ........................ TTAACGGTGTATATATTATATTATAATAAAAGTC 1211873 24 100.0 34 ........................ CGTTGTAGCTCCTCAGGCTTTTCTTGCAACACCT 1211931 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== =================================== ================== 8 24 99.0 34 CTTTCAGTTCTTCCTTATTTCGAC # Left flank : AAAGCGTGGAACAGAGGATTAAGGTGTTAGATTACGGTCAACCGTCAATTAACTTAGCTTTGGAGGGAACCACTTTAGTATATAAAGACAAGATGGATATAGAACTCAGCTACCTACACGCATTGTTAAAAGTACTCAGCAAGATAATTGGAAGTAGAAAAGTTGAAGAAAATTGCGTAAAGTTAAGTGATATCAGGGATTTAACTGAGAAATACTATACGTCTGAGCTAATTAGGTCAGCAGTATTGAACGAGATTGATAAGCTAGAGGGAAATAGGGACAAATTAACTTCTGAGCCCGAAATTTTTAGCTGAAATCCTGCTGGAAGAGAAGGTAAAAGAATGTGAGCCTAACAAGCGTAATCTATTTGCCCACGGAGGGTTTGAGAAAAATGTTACCTACATGTGGAAACGTGATAATGAAATTTGTGTTAGTTATCGTGACTGCTTAGAGAACGTGAAAAACATCTTGAATGAGATTACGGAAATCAAAATTTTAAC # Right flank : CGCTGTTATGCTCATTAGCAAATCCATTTTATAACTACTGAAGCGTCGACTACTGCCAATTCTTGACACGCAACTCCCTAATTGTCTCTTCTGATCTTCTGCCTCCGTAATTAAGGAAGAACTCATGAGACCTCAATGAAGCCTCATTAATCCTTCTTTTTCTTTTCCTCTTCCTCAATTACTTCCTCTATTTTTCTCCTTATTACTTCACTCCAGTTTATGTAGCTTAGCTCGTCCATTTTCCTCTTTAACTTTTCATCAATCCTTATACTTATTGTTGGCATAGTTAATGATCAGTAGCGTAAGTTACTAAGATTTAAGATGCATTTACAGCATACTCCCCGATCCTACAGAGTATTTAACACAGTTGGACACGAGTTGCAAAAGTTTGTTCGTAATCAGATTTTTTTAACAAAAACTTTAGGAAAATCTTTAAACCACTCCTTGCGCAAAATATTAACTCTCAGAGAAGAAATAAGATATTTACGTAGTTTAATATC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCAGTTCTTCCTTATTTCGAC # Alternate repeat : CTTTCAGTTCTTCTTTATTTCGAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.50%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //