Array 1 2326998-2332861 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEHGE010000001.1 Sulfur-oxidizing endosymbiont of Gigantopelta aegis strain Gae_SOB scaffold1_size4213896, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 2326998 31 100.0 34 ............................... CCGATTTTCCTTTTTTAAATGGCATTTTTTTAGT 2327063 31 100.0 35 ............................... ATCTTCGATAACTGTTTGTAATGTTCTTTTCATGT 2327129 31 100.0 38 ............................... TCTTGCAATATCAAATTTTCCAGAGGTTGCATTATAGT 2327198 31 96.8 35 ..............................A CATCGTTATACATTTGAAATGACATTGCTATTAGT 2327264 31 100.0 35 ............................... ACATTCTGGCAAAAAACACAATCGATGAAATTGTT 2327330 31 100.0 35 ............................... AATAAGCGTATTATTAGACTTGTTGTAAAACAATT 2327396 31 100.0 34 ............................... TTGAAATAACGCCCGCAAATACCTCAAAAATGAT 2327461 31 100.0 35 ............................... AAGGCACAACGAGCCTCAAGGTATATTATATCAAT 2327527 31 100.0 35 ............................... TTCTTAAAGGCGAAGATTTAGGTTTCGGCGTTGGT 2327593 31 100.0 34 ............................... TAATACGGATATCTCCCCGCTCCCAAAAATTATT 2327658 31 96.8 38 ..............................A ACAACATGAACGGGGCAATTGTTGATCTGTTCTCTAAT 2327727 31 100.0 35 ............................... ATTAAATTTTGTAAATTCAGCAATAGATTGTGTCT 2327793 31 100.0 35 ............................... ACTAAATCCCGCCAACGATCCTAAAATCTCATTTT 2327859 31 100.0 35 ............................... ATAAAAAATCTGTATCAATCATTAATACAGACTGT 2327925 31 100.0 36 ............................... ATTACGTCGATTTGCGAGTGCTGTGATATTATCAAT 2327992 31 100.0 37 ............................... AAGGGAAAAAATTAGTTAATCTTTATCAAGCACCAAT 2328060 31 100.0 34 ............................... AGAACAAGAAATAGAACATTATTTGCAAACAGAG 2328125 31 100.0 35 ............................... TCAAGTCGAACGTCGATTTTTTGATTTATGGAACT 2328191 31 100.0 34 ............................... TTAAATTCACCTAACGTTATCGTTCCGCTATTTT 2328256 31 100.0 36 ............................... GAGACGATAAACGGTCACATCCCACGCATCAGGGAT 2328323 31 100.0 34 ............................... CGGACCGGGCAAGAAGTGCATGGAAATCGGAAAT 2328388 31 100.0 35 ............................... CCGAATTGACAGTAACGACTGCACCTAAAGTTTTT 2328454 31 100.0 34 ............................... AACAATTCGGCAATACGTTTTTCTTCATTTTCTG 2328519 31 100.0 35 ............................... TGGAGATATAAAAATGATAGAACAAAAAAAATCAT 2328585 31 100.0 36 ............................... TATTGTTTTTAATAATGACTCTAATCGTATCAATTT 2328652 31 100.0 34 ............................... GAGTGAAAATGGGGCAAGTCAAAAAAACATTAGT 2328717 31 100.0 34 ............................... AATTACGCGCTGATTTATCAGACTTATATCAAAC 2328782 31 100.0 35 ............................... AAATTAAGTGAGCCCCGAGGGGATATAAAAATTGT 2328848 31 96.8 37 ..............................A CACCTGCTAAACCCCGCAATAATTTTCTAAAATTATT 2328916 31 100.0 35 ............................... TGATCACAATCTTGCCAATAATGTAAAAGTTACAA 2328982 31 100.0 35 ............................... AAATAACAATTAATTCCGCCATCGCCAATAGTATT 2329048 31 100.0 36 ............................... ATCAGTCAAATTGACGGGTTTGTATTTTTTAAAATT 2329115 31 100.0 35 ............................... TGTTGTTATATCTGGTCATCATGTTGATCCATCTT 2329181 31 100.0 35 ............................... CATGCACTTCTTGCCCGGGAAGGAAGCCCATTGGT 2329247 31 100.0 35 ............................... ACCACTCCCGCCACGTAGTAAATGGCCTGAAAGAT 2329313 31 100.0 33 ............................... AACTCAACAAATAAAAAAGAAATAGATAATATC 2329377 31 100.0 35 ............................... AATTAATCAATGATATTGATTATGATTTTTTATAT 2329443 31 100.0 36 ............................... AAGAAATTATTACTTTTTTCAGGCAAACAACTCAGT 2329510 31 100.0 34 ............................... TTTTGGGTGAGCGTAGCGAGGGGCAAAGCCCCTT 2329575 31 100.0 34 ............................... ACCACTTCCTCCGCGTAGCAAATGACCTGAAAGA 2329640 31 100.0 34 ............................... AACTATTTGATAGGGATCATTTTTCAATCGATAA 2329705 31 100.0 34 ............................... CCAATACCTTTGCTTTCCTAAATGTTTTCTACAA 2329770 31 100.0 33 ............................... AGAAGATTTAGCGACAAAATTTAGTACTGTTAA 2329834 31 100.0 33 ............................... AAAAAATGATATTGATAAATTTATAGAAAAAAT 2329898 31 100.0 34 ............................... CGAAATTGTTTGTGCTCTTGATTTTAATTTTTTT 2329963 31 100.0 33 ............................... CTTTTCCGGTTTTTACTTCAATAAAAAAATACG 2330027 31 100.0 33 ............................... TGTTGTTGTATCCGGTCATCATGTTGATCCATC 2330091 31 100.0 34 ............................... CATGCCCCATTGATCCGGGATGCCCAATTAATAA 2330156 31 100.0 34 ............................... CTCCATCGCCAATAGTATAAGCGACAAATTCCCC 2330221 31 100.0 35 ............................... AGTCATTTCTCCTTTGTTCGCATATGAAATGGGAT 2330287 31 100.0 36 ............................... AGTGATATCATTAATAAAACTATTAAATTCATTAAT 2330354 31 100.0 35 ............................... TTTGCTGATGAAACCGACGTTGGCATCAATATCGA 2330420 31 100.0 33 ............................... TTGAAATAACGCCCGCAAATACTTCAAAGAATG 2330484 31 100.0 35 ............................... ATATCCAGATCAGGTTCATATCCAGATCTAGGTTC 2330550 31 100.0 34 ............................... CAGCGCTGCAGTGTAAACTCGATAATTGCTTCTT 2330615 31 100.0 35 ............................... AACTCAACAAATAAAAAAGAAATAGATAATATCGA 2330681 31 100.0 35 ............................... ATTTTTAAATTATGTTGATACAGCGAGCCAAGCGC 2330747 31 100.0 34 ............................... GTCCCATTCCGCCGCAGTTAATGTACTGCTCGTC 2330812 31 100.0 34 ............................... AGTGGGGTGAGGGAACTGGAACTAGGTCGGAAGT 2330877 31 100.0 33 ............................... CTATCTTTTTTGACTTAAATATAAGTCAAGATC 2330941 31 100.0 34 ............................... CGGGCACAGAAAATGGAAAAGTTTTTAATATTGT 2331006 31 100.0 33 ............................... GGGAAATTGAACTTGAGACGGACGCCCTTTGGG 2331070 31 100.0 35 ............................... ACTTTGCGCAAACGATTCTGCAGAATCATTTCATT 2331136 31 100.0 35 ............................... TGGCTAATAATACAATCGATGAAATTGTATTATTA 2331202 31 100.0 34 ............................... ATTATTTTTAATAATGACTCTGATCGTATCAATT 2331267 31 100.0 35 ............................... TAACTGCAAGATACGTCCCGAAAAATGATTTACCT 2331333 31 100.0 33 ............................... TGGAACTGCAAACGCTTATGTTTTGACAAAAAT 2331397 31 100.0 33 ............................... AATATCGTTAATATCTTTGACTGCAAACCCGAT 2331461 31 100.0 33 ............................... CGATGTAAAATCCAGGGATATATTTATCATTTT 2331525 31 100.0 32 ............................... ACCATCGCTGGCAAGTTTTTCCGTCGATATAA 2331588 31 100.0 35 ............................... ATACATTTTTTGATAAATTGTACAAAATTCAATAC 2331654 31 100.0 34 ............................... TATTATCAAGTAATTGATCCAAGTTCTGTGCCGT 2331719 31 100.0 33 ............................... CATATTGAACGCTGAATCCATGAGCATATCTTG 2331783 31 100.0 37 ............................... ACTAATAGATAAAAAAGAAGGCAGTGAAGTAGTAAAG 2331851 31 100.0 35 ............................... ATATTGAATACAAAACAGTTCACAAGGTATTTTGC 2331917 31 96.8 35 ..............................A ACACAGATTTGTTCTGCAATAATAATTTTCTTATC 2331983 29 93.5 38 .....................--........ TGATCGCACAGGCTGGGTATGGACACTCACACAAAAAG 2332050 31 100.0 32 ............................... TAAAAAAATCATAGAACAAGTAGTTGCACACT 2332113 31 100.0 35 ............................... TTGGCAATCGATAATGGACAAAGATTAGAAAATAT 2332179 31 100.0 34 ............................... AATTACGCACTGATTTATCAGACTTATATCAAAC 2332244 31 100.0 32 ............................... CAACTTGGTTGGGGGCTTTATCATTCAGTGGG 2332307 31 100.0 34 ............................... AAAATCAGTACGTTCGTGATCAACTTCTTTACAG 2332372 31 100.0 34 ............................... AATTTTAAATCATGTATTTTAGTCCATGATTGTG 2332437 31 100.0 36 ............................... AGATCTTAAAAATACATTAAATAAAATCAAAAAAAC 2332504 31 100.0 34 ............................... TTGAAATAACGCCCGCAAATACTTCAAAAAATGA 2332569 31 100.0 34 ............................... ATCTGCAAATACAATTCTAGCGACCACGGCAAAC 2332634 31 100.0 35 ............................... AACAATTCAGCAATACGTTTTTCTTCATTTTCTGT 2332700 31 100.0 34 ............................... CTCCATCCCCAATAGTATAAGCGACAAATTCCCC 2332765 31 100.0 35 ............................... ATAACACTTGTACTGCAATCACTACAAAAATCAAC 2332831 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ====================================== ================== 90 31 99.8 35 GTCGCGCCTTCACGGGCGCGTGGATTGAAAC # Left flank : AATTTTATACCCCCTATTTGGTTAAATAATTATGCTTGTACTTGTTACTTATGATGTTAGTGTGATTTCTACCGGAGGACAGCGTCGCTTACGACGAATTGCTAAAACGTGTTTAGATCATGGCATGAGGGTGCAAAATTCTGTTTTTGAATGTGAAGTCACACCTGCACAATTTGTTCAACTTAAAAGCGAGTTAGTAGATATTTTTGATTCAAAAAAAGATAGTTTGCGTTTTTATATGCTTGGGAAAAAAGGACGTCAGAAGGTTGAACATCTTGGAGCAAAGCCTGTTTTAGATCCCATCAATGATGCTTTAATTCTTTAATCGCTAACCCTTCGTTCTCATTCATTCCCCGACAGTTTAGCGGAGCAATAAGTGACTGTTTTTTAAATGAATTTAAATGTAAATCATTTTATGATTAATTTCCTCTGTTTAAGTTTTAAGGTTAGCGGATCCTATCGATTTGTTTTTTTAATTTCAATAGGTTAGACTCGAATAT # Right flank : CAATATGAACGGGGCAATTGTTGATCTGTGATGTGTCAACACTTTTCCGGACAGTTTTCTAAATATTTTTTGGCTGTTTCAAGTGATTTTTGTCATTTTGTATTTCCTATCATTTTAGTTTCTCATGTTAACTTTAAACAGATGAAGAGAAAGGGCTTTTGCCCTCTGGAACGATAGAGCCGTTCCATTCACCCAAGGTATTTTCACAACGGTAATGATCCTGTTACAATATCTTCACGGCACAGGCTGAGGAGCCGATGGCCGTCAACGGTAATGGGCGGCATTTATGTCGCCTTTACCCCTCTTCAATCAATCGATTTAAGCTATTTCCTGCTGTATTTCATAATCGACTGGTGACAAATAATCATTAGCCGAATGAAGTCGCTCCCGATTATAAAATACCTCAATATATTCAAATATTGCCTGCTTTGCTTCTACTCTGGTTTTGAATCGACAATGGTGCGTCAATTCAGTTTTCAAACTATGAAAGAAGCTCTCTG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 2334415-2334706 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEHGE010000001.1 Sulfur-oxidizing endosymbiont of Gigantopelta aegis strain Gae_SOB scaffold1_size4213896, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 2334415 31 100.0 35 ............................... TCGGGCTTGTCTACCTTGTCTGCTTTGCAGGCCAA 2334481 31 96.8 34 ..........................A.... ATTGTTTTTTGCTCTTTTTATATTGCGCTATTGC 2334546 31 100.0 33 ............................... ATTATATTGTCACAAAAACCCAAGATCGCCCGC 2334610 31 100.0 35 ............................... ACAAAAAATCTCATTAGAGTGCTAAACGATAATGG 2334676 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== =================================== ================== 5 31 99.4 34 GTCGCGCCTTCACGGGCGCGTGGATTGAAAC # Left flank : TCTTTCTCTCTATCCGTTTTAGGAGAGCTAACCCAATCATAATAGCAACTACGGAAACATCCATAAAACGGCACAGAATCGTTACCGGGTACTTTAGCCTGATCAGTTATCCATGCGTACTTCACAAAGTTTCCCTTGCAAAGTACGCTGTGGCCTTTTTAATAAATCACGCTCCTGAATCACTTTTGCCAATTCTTTTTTCAGACGTTTTACTTCATCATAAATGTGTTCATCACTTCTATTGGCTACCGTCTTCACCGGTTTGGAATATTTACTGATCCAGGTATGTAGAGTATTTACATTAACACCTAGCTCCCTGGCAGTCTGAGAAACAGGTTGATCCGTCTCATTAGCTAATTTGACAGCTGATTCTTTAAATTCTGATGTATAGCTTTTATTCGGTTTTTTGTTTGATCATTCATTTTAGGTCACACTTTTTATCTTTTAGTTATTTTTAAGTTGTGTGTCCGGTTAAGTATAGCCACATTACTGGTCTCTAA # Right flank : CAAATTTGAAACATTTGAAAAATGGTGAGTAATGTGGCTATACTTAACCGGACACACAACTTAAAATAACTAAAAGATAAAAAGTGTGACCTAAAATGAATGATCAAACAAAAAACCGAATAAAAGCTATACATCAGAATTTAAAGAATCAGCTGTCAAATTAGCTAATGAGACGGATCAACCCGTTTCTCAGACTGCCAGGGAGCTAGGTGTTAATGTAAATACTCTACATACCTGGATCAGTAAATATTCCAAACCGGTGAAGACGGTAGCCAATAGAAGTGATGAACACATTTATGATGAAGTAAAACGTCCAAAAGTGATTCAGGAGCGTGATTTATTAAAAAGGCCACAGCGTACTTTGCAAGGGAAACTTTGTGAAGTACGCATGGATAACTGATCAGGCTAAAGATTACCCGGTAACGATTCTGTGCCGTTTTATGGATGTTTCCCGTAGTTGCTATTATGATTGGGTTAGCTCTCCTAAAACGGATAGAGAG # Questionable array : NO Score: 9.03 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 2336137-2336874 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEHGE010000001.1 Sulfur-oxidizing endosymbiont of Gigantopelta aegis strain Gae_SOB scaffold1_size4213896, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 2336137 31 100.0 32 ............................... CTTTTCTTGCCTTGCCTGCGTTGCTTATTTGT 2336200 31 100.0 33 ............................... CTGCATTTTAGCAGCAAAGTTTAACATGTTATG 2336264 31 100.0 34 ............................... GTCGATGACTTTTTAATGCGAGCTCATGTTTGTC 2336329 31 100.0 32 ............................... AATAGTAATACACCAAACAGAATTTTAGATCA 2336392 31 100.0 32 ............................... ATCAAAATTTCTTCAAACACTAACACTTTTTA 2336455 31 100.0 32 ............................... ATACTGCATTGTATTAATCATTAGATTCAGCG 2336518 31 100.0 34 ............................... TCTACTAAAAGTGGTCGGATCAAATACACTCCAT 2336583 31 100.0 34 ............................... CATTTTCATATTTTGATCGCAAATGGCAATAGCA 2336648 31 100.0 35 ............................... TACCGCCAATCGCGAAGATATTGTCTCATTAAAAT 2336714 31 100.0 34 ............................... CATTATCTAAAATCCGACCTGAATTGCTCGGGGC 2336779 31 100.0 34 ............................... AATAATTGACCCCCGACCGAAAAGGGTTTGTTTT 2336844 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== =================================== ================== 12 31 100.0 34 GTCGCGCCTTCACGGGCGCGTGGATTGAAAC # Left flank : GATGGATTGCTTTGGCATACTGACCGAGGTAGCCAATATGCCTCTGATAGTCATAGAAAAATATTGTCGGATCATAACATAATTCAGTCTATGAGCCGCAAAGGAAATTGCTGGGACAATGCTGTATCAGAGAGCTTCTTTCATAGTTTGAAAACTGAATTGACGCACCATTGTCGATTCAAAACCAGAGTAGAAGCAAAGCAGGCAATATTTGAATATATTGAGGTATTTTATAATCGGGAGCGACTTCATTCGGCTAATGATTATTTGTCACCAGTCGATTATGAAATACAGCAGGAAATAGCTTAAATCGATTGATTGAAGAGGGGTAAAAGGCGACATAAATGCCGCCCATTACCGTTGACGGCCATCGGCTCCTCAGCCTGTGCCGTGAAGATATTGTAACAGGATCATTACCGTTGTGAAAATACCTTGGGTGAATGGAACGGCTCTATCGTTCCAGAGGGCAAAGCCCTTTCTTGACACATCAGGGAGATCAT # Right flank : CTCTTGTTGTTTTTGCCATTGTGATGTGTCAACACTTTTCCGGACAGTTTTCTAAATATTTTTTGGCTGTTTCAAGTGATTTTTGTCATTTTGTATTTCCTATCATTTTAGTTTCTCATGTTAACTTTAAACGATGAAGAGAAAGGGCTTTGCCCTCTGGAACGATAGAGCCGTTCCATTCACCCAAGGTATTTTCACAACGGTAATGATCCTGTTACAATATCTTCACGGCACAGGCTGAGGAGCCGATGGCCGTCAACGGTAATGGGCGGCATTTATGTCGCCTTTACCCCTCTTCAATCAATCGATTTAAGCTATTTCCTGCTGTATTTCATAATCGACTGGTGACAAATAATCATTAGCCGAATGAAGTCGCTCCCGATTATAAAATACCTCAATATATTCAAATATTGCCTGCTTTGCTTCTACTCTGGTTTTGAATCGACAATGGTGCGTCAATTCAGTTTTCAAACTATGAAAGAAGCTCTCTGATACAGCAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 2338427-2340654 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEHGE010000001.1 Sulfur-oxidizing endosymbiont of Gigantopelta aegis strain Gae_SOB scaffold1_size4213896, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 2338427 31 100.0 33 ............................... AATTTCTTGTACTGTTTTACTCCAAACATTTCT 2338491 31 100.0 33 ............................... TCACATGGGGAAAAGCGCGCACGGGGAATCAAT 2338555 31 100.0 33 ............................... GTAAAAACAAAAAATCATGGGACGTTCTGAATT 2338619 31 100.0 34 ............................... CCCCAAATACAATTTTAAATAACTCGCAGATAGA 2338684 31 100.0 34 ............................... TAACTGCAAGATACGTCCCGAAAAATGATTGACC 2338749 31 100.0 35 ............................... CTTGCTTGCCTTGCTTACCCGCGCCAGTTTTAGCT 2338815 31 100.0 32 ............................... GATAAAAAAATACGACCGTTAACAATAGCAAT 2338878 31 100.0 36 ............................... ATATCGGGCGCAGCATTGTTAGACGGAGAGCAAAAA 2338945 31 100.0 34 ............................... TTTTAATATCAATTTAGTTATATTTTGTTACCAT 2339010 31 100.0 33 ............................... TTATCTATTAGCGAACTAATCAATGATTTTTGT 2339074 31 100.0 33 ............................... AATTTTATAATGTTTAATATCTGATTTTAAACA 2339138 31 100.0 34 ............................... GCTTAAATTGTTGATTTTTGTAGTGATTGCAGTA 2339203 31 100.0 34 ............................... CCCCATCCCATTTCTCTGCGGATTTTGTTATGAC 2339268 31 100.0 32 ............................... TTTATATTCGATAAAAATTCTAATAATTCGAC 2339331 31 100.0 34 ............................... ATCGCGCTTGATTGGGTTTTGCATATATTGAGCT 2339396 31 100.0 34 ............................... CGCCATCCCCAATAGTATAAGCGACAAATTTCGA 2339461 31 100.0 34 ............................... TACAAATCCGTCTTTATAATCGATTATTTTCAGC 2339526 31 100.0 32 ............................... AGTTGTTGGTTTTCCATCGTAAATAATACGTT 2339589 31 100.0 35 ............................... TAATCTCTATAAGCCACTCTTTAATTTTTTGTTTT 2339655 31 100.0 33 ............................... GTACTGCATTGTATTAATCATTAGATTCAGCGG 2339719 31 100.0 36 ............................... AATTCCTATAAATTATATTGCCGAGGCTTTTTGCAT 2339786 31 100.0 34 ............................... GTTTTGCGGGGAGCGTCAAATATGTCAAAGATGA 2339851 31 100.0 36 ............................... TATAATTTTTTAGTAATGGCGTTATCTATTTTCTGA 2339918 31 100.0 35 ............................... ACCGCAAGCACTGGCACATTTGCAGAATTAAAAAG 2339984 31 83.9 30 .........................AAC.TA AGCTGCAATAACACAATCTGCCCAGTTTTG 2340045 31 100.0 33 ............................... ATTAGTAGGCTTTGGGTTTACTGGCGATCAGGC 2340109 31 100.0 34 ............................... ATAAAATATTATCTGCAATTTTATTTGTTGATAT 2340174 31 100.0 34 ............................... AGAAACACTTGCTAAAAATTATTTAATTACCGGT 2340239 31 100.0 33 ............................... TCCCAAATATAGATCTATTATATACTGTTACGC 2340303 31 100.0 31 ............................... CATGTTCGACTTACATCCCCAATTGATTTAC 2340365 31 100.0 35 ............................... CCTTGAGTGTTTGAAATTGCAGGATCAACTGCAAT 2340431 31 100.0 33 ............................... CCGGAACGTATCTTGCAGTTAAAAAGCGAATAA 2340495 31 100.0 35 ............................... ATTGAAAAGTGCAGATTGTTCATCGCGTTTGATGG 2340561 31 100.0 32 ............................... TATTGTCAAGTGTCATGTTGACAAATGTATTT 2340624 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ==================================== ================== 35 31 99.5 34 GTCGCGCCTTCACGGGCGCGTGGATTGAAAC # Left flank : TCTCTATCCGTTTTAGGAGAGCTAACCCAATCATAATAGCAACTACGGAAACATCCATAAAACGGCACAGAATCGTTACCGTAATCTTTAGCCTGATCAGTTATCCATGCGTACTTCACAAAGTTTCCCTTGCAAAGTACGCTGTGGCCTTTTTAATAAATCACGCTCCTGAATCACTTTTGCCAATTCTTTTTCAGACGTTTTACTTCATCATAAATGTGTTCATCACTTCTATTGGCTACCGTCTTCACCGGTTTGGAATATTTACTGATCCAGGTATGTAGAGTATTTACATTAACACCTAGCTCCCTGGCAGTCTGAGAAACGGGTTGATCCGTCTCATTAGCTAATTTGACAGCTGATTCTTTAAATTCTGATGTATAGCTTTTATTCGGTTTTTTTGTTTGATCATTCATTTTAGGTCACACTTTTTATCTTTTAGTTATTTTAAGTTGTGTGTCCGGTTAAGTATAGCCACATTATTGGCTCTCTCCAATATA # Right flank : CATTGCGTCGATTTGCGAGTGCTGTGATATTGTCAGTCGTGATGTGTCAACACTTTTCCGGACAGTTTTCTAAATATTTTTTGGCTGTTTCAAGTGATTTTTGTCATTTTGTATTTCCTATCATTTTAGTTTCTCATGTTAACTTTAAACAGATGAAGAGAAAGGGCTTTGCCCTCTGGAACGATAGAGCCGTTCCATTCACCCAAGGTGTTTTCACAACGGTAATGATCCTGTTACAATATCTTCACGGCACAGGCTGAGGAGCCGATGGCCGTCAACGGTAATGGGCGGCATTTATGTCGCCTTTTACCCCTCTTCAATCAATCGATTTAAGCTATTTCCTGCTGTATTTCATAATCGACTGGTGACAAATAATCATTAGCCGAATGAAGTCGCTCCCGATTATAAAATACCTCAATATATTCAAATATTGCCTGCTTTGCTTCTACTCTGGTTTTGAATCGACAATGGTGCGTCAATTCAGTTTTCAAACTATGAAA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 5 3822682-3827089 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEHGE010000001.1 Sulfur-oxidizing endosymbiont of Gigantopelta aegis strain Gae_SOB scaffold1_size4213896, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 3822682 30 96.8 33 .......................-....... CCGATTTTCCTTTTTTAAATGGCATTTTTTAGT 3822745 30 96.8 34 ..........................-.... TTTTTCCTCCATTTTTTAAATCTTTTAAAACCCC 3822809 31 96.8 37 ..............................A CACGATTGATTGATAATTTTTTAAATTCACCTAACGT 3822877 31 96.8 36 ..............................A CATCTTCGATAACTGTTTGTAATGTTCTTTTCATGT 3822944 31 100.0 33 ............................... ACAAAAAATCTCATTAGAGTGCTAAACGATAAT 3823008 31 100.0 35 ............................... TCTCGTTGTTTTTGCCATTGTCCTCTCCGATATAT 3823074 31 100.0 34 ............................... TCAGAACTGATAACGATGTGCAGGGTGGGTTTTT 3823139 31 96.8 36 ..............................A CAGTTGTAACTTAATGATCGCAATAAACGTCTTGTT 3823206 31 100.0 34 ............................... GTCAAGCGATGTTGAAAACGGGAAACGCGCTAGT 3823271 31 100.0 34 ............................... AACTCAGACCATACGCAGTCAAATATCCTTAAAT 3823336 31 100.0 35 ............................... AGTCGTAACAATCGAATCTGAAAAAAAAGTGTATT 3823402 31 100.0 35 ............................... ACAAGGTATTTTGCCAGTGGATGTTTTGTGTTAAT 3823468 31 100.0 34 ............................... GCGGAAAAGTAGCCGGGATCACAACATTAGTTCT 3823533 31 100.0 34 ............................... ATCGGTGACAGGTATTGATGCTGGAAAAGTTGAA 3823598 31 100.0 36 ............................... GAGACGATAAACGGTCACATCCCACGCATCAGGGAT 3823665 31 100.0 34 ............................... CGGACCGGGCAAGAAGTGCATGGAAATCGGAAAT 3823730 31 100.0 36 ............................... CCGAATTGACAGTAACGACTGCACCTAAAGTTTTTT 3823797 31 100.0 33 ............................... AACAATTCGGCAATACGTTTTCTTCATTTTCTG 3823861 31 100.0 34 ............................... TGGAGATATAAAAATGATAGAACAAAAAAATCAT 3823926 31 100.0 36 ............................... TATTGTTTTTAATAATGACTCTAATCGTATCAATTT 3823993 31 100.0 34 ............................... GAGTGAAAATGGGGCAAGTCAAAAAAACATTAGT 3824058 31 96.8 35 ..............................A CAATTACGCGCTGATTTATCAGACTTATATCAAAC 3824124 31 100.0 35 ............................... AAATTAAGTGAGCCCCGAGGGGATATAAAAATTGT 3824190 31 100.0 36 ............................... ACCTGCTAAACCCCGCAATAATTTTCTAAAATTATT 3824257 31 96.8 36 .............A................. TTGATCACAATCTTGCCAATAATGTAAAAGTTACAA 3824324 31 96.8 36 ..............................A CAAATAACAATTAATTCCGCCATCGCCAATAGTATT 3824391 31 100.0 36 ............................... ATCAGTCAAATTGACGGGTTTGTATTTTTTAAAATT 3824458 31 100.0 35 ............................... TGTTGTTATATCTGGTCATCATGTTGATCCATCTT 3824524 31 96.8 36 ..............................A CCATGCACTTCTTGCCCGGGAAGGAAGCCCATTGGT 3824591 30 96.8 35 ........................-...... ACCACTCCCGCCACGTAGTAAATGGCCTGAAAGAT 3824656 31 100.0 32 ............................... AACTCAACAAATAAAAAGAAATAGATAATATC 3824719 31 100.0 34 ............................... AATTAATCAATGATATTGATTATGATTTTTATAT 3824784 31 100.0 33 ............................... AAAGAAATTACTTTTTCAGGCAAACAACTCAGT 3824848 31 100.0 34 ............................... TTTTGGGTGAGCGTAGCGAGGGGCAAAGCCCCTT 3824913 31 100.0 34 ............................... ACCACTTCCTCCGCGTAGCAAATGACCTGAAAGA 3824978 31 96.8 35 ..............................A CAACTATTTGATAGGGATCATTTTTCAATCGATAA 3825044 31 96.8 33 ..............................A CAATACCTTTGCTTTCCTAAATGTTTTCTACAA 3825108 31 100.0 33 ............................... AGAAGATTTAGCGACAAAATTTAGTACTGTTAA 3825172 31 100.0 32 ............................... AAAAATGATATTGATAAATTTATAGAAAAAAT 3825235 31 96.8 34 ..............................A CCGAAATTGTTTGTGCTCTTGATTTTAATTTTTT 3825300 31 100.0 34 ............................... CTTTTCCGGTTTTTACTTCAATAAAAAAAATACG 3825365 31 100.0 33 ............................... TGTTGTTGTATCCGGTCATCATGTTGATCCATC 3825429 31 100.0 34 ............................... CATGCCCCATTGATCCGGGATGCCCAATTAATAA 3825494 31 100.0 34 ............................... CTCCATCGCCAATAGTATAAGCGACAAATTCCCC 3825559 31 100.0 35 ............................... AGTCATTTCTCCTTTGTTCGCATATGAAATGGGAT 3825625 31 100.0 36 ............................... AGTGATATCATTAATAAAACTATTAAATTCATTAAT 3825692 31 100.0 35 ............................... TTTGCTGATGAAACCGACGTTGGCATCAATATCGA 3825758 31 100.0 33 ............................... TTGAAATAACGCCCGCAAATACTTCAAAGAATG 3825822 31 96.8 36 ..............................A CATATCCAGATCTGGGTTCATATCCAGATCTGGGTT 3825890 31 100.0 34 ............................... CAGCGCTGCAGTGTAAACTCGATAATTGCTTCTT 3825955 31 100.0 34 ............................... AACTCAACAAATAAAAAGAAATAGATAATATCGA 3826020 31 100.0 35 ............................... ATTTTTAAATTATGTTGATACAGCGAGCCAAGCGC 3826086 31 100.0 34 ............................... GTCCCATTCCGCCGCAGTTAATGTACTGCCCGTC 3826151 31 100.0 33 ............................... AGTGGGGTGAGGAACTGGAACTAGGTCGGAAGT 3826215 31 96.8 34 ..............................A CCTATCTTTTTTGACTTAAATATAAGTCAAGATC 3826280 31 100.0 34 ............................... CGGGCACAGAAAATGGAAAAGTTTTTAATATTGT 3826345 31 96.8 34 ..............................A CAGGAAATTGAACTTGAGACGGACGCCCTTTGGG 3826410 31 100.0 34 ............................... ACTTTGCGCAAACGATTCTGCAGAATCACTCATT 3826475 31 96.8 35 ..............................A CTGGCTAATAATACAATCGATGAAATTGTATTATT 3826542 31 96.8 34 .............A................. ATTATTTTTAATAATGACTCTGATCGTATCAATT 3826607 31 100.0 35 ............................... TAACTGCAAGATACGTCCCGAAAAATGATTTACCT 3826673 31 100.0 33 ............................... TGGAACTGCAAACGCTTATGTTTTGACAAAAAT 3826737 31 96.8 34 ..............................A CAATATCGTTAATATCTTTGACTGCAAACCCGAT 3826802 31 100.0 33 ............................... CGATGTAAAATCCAGGGATATATTTATCATTTT 3826866 31 100.0 32 ............................... ACCATCGCTGGCAAGTTTTTCCGTCGATATAA 3826929 31 100.0 34 ............................... ATACATTTTTTGATAAATTGTACAAAATCAATAC 3826994 31 96.8 34 ..............................A CTATTATCAAGTAATTGGATCAAGTCTGTGCCGT 3827059 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ===================================== ================== 68 31 99.1 34 GTCGCGCCTTCACGGGCGCGTGGATTGAAAC # Left flank : GAATTTTATACCCCCTATTTGGTTAAATAATTATGCTTGTACTTGTTACTTATGATGTTAGTGTGATTTCTACCGGAGGACAGCGTCGCTTACGACGAATTGCTAAAACGTGTTTGAATCATGGCATGAGGGTGCAAAATTCTGTTTTTGAATGTGAAGTCACACCTGCACAATTTGTTCAACTTAAAAGCGAGTTAGTAGATATTTTTGATTCAAAAAAGATAGTTTGCGTTTTTTATATGCTTGGGAAAAAAGGACGTCAGAAGGTTGAACATCTTGGAGCAAAGCCTGTTTTAGATCCATCAATGATGCTTTAATTCTTTAATCGCTAACCCTTCGTTCTCATTCATTCCCCCGACAGTTTAGCGGAGCAATAAGTGACTGTTTTTTAAATGAATTTAAATGTAAATCATTTTATGATTAATTTCCTCTGTTTAAGTTTTAAGGTTAGCGGATCCTATCGATTTGTTTTTTAATTTCAATAGGTTAGACTCGAATAT # Right flank : CCATATTGAACGCTGAATCCATGAGCATTAATGTGGCTATACTTAACCGGACACACAACTTAAAATAACTAAAAAGATAAAAAGTGTGACCTAAAATGAATGATCAAACAAAAAAACCGAATAAAAGCTATACATCAGAATTTAAAGAATCAGCTGTCAAATTAGCTAATGAGACGGATCAACCCGTTTCTCAGACTGCCAGGGAGCTAGGTGTTAATGTAAATACTCTACATACCTGGATCAGTAAATATTCCAAACCGGTGAAGACGGTAGCCAATAGAAGTGATGAACACATTTATGATGAAGTAAAACGTCTGAAAAAAGAATTGGCAAAAGTGATTCAGGAGCGTGATTTATTAAAAGGCCACAGCGTACTTTGCAAGGGGAAACTTTGTGAAGTACGCATGGATAACTGATCAGGCTAAAGATTACCCGGTAACGATTCTGTGCCGTTTTATGGATGTTTCCGTAGTTGCTATTATGATTGGGTTAGCTCTCCT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 6 3828646-3829347 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEHGE010000001.1 Sulfur-oxidizing endosymbiont of Gigantopelta aegis strain Gae_SOB scaffold1_size4213896, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =========================================================================================================================== ================== 3828646 31 100.0 33 ............................... CTGCATTTTAGCAGCAAAGTTTAACATGTTATG 3828710 31 100.0 34 ............................... GTCGATGACTTTTTAATGCGAGCTCATGTTTGTC 3828775 31 100.0 33 ............................... ATCAAAATTTCTTCAAACACTAACACTTTTTTA 3828839 31 100.0 33 ............................... ATACTGCATTGTATTAATCATTGAATCTCAGCG 3828903 31 100.0 34 ............................... TCTACTAAAAGTGGTCGGATCAAATACACTCCAT 3828968 31 100.0 34 ............................... CATTTTCATATTTTGATCGCAAATGGCAATAGCA 3829033 31 100.0 35 ............................... TACCGCCAATCGCGAAGATATTGTCTCATTAAAAT 3829099 31 93.5 33 ..........................A..C. ATTATCTAAAATCCGACCTGAATTGCTCGGGGC 3829163 31 93.5 123 .............................TG ACCCCCGACCGAAAAGGGTTTGCTCGGGGATGTGTCAACACGCCTTCAAATATTTTTTTGGCGCGTGGTCATTGTAATCACAATAATTGACCCCCGACCGAAAGAGGTTTGTTTTTCACAACG 3829317 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== =========================================================================================================================== ================== 10 31 98.7 44 GTCGCGCCTTCACGGGCGCGTGGATTGAAAC # Left flank : CTGGGACAATGCTGTATCAGAGAGCTTCTTTCATAGTTTGAAAACTGAATTGACGCACCATTGTCGATTCAAAACCAGAGTAGAAGCAAAGCAGGCAATATTTGAATATATTGAGGTATTTTATAATCGGGAGCGACTTCATTCGGCTAATGATTATTTGTCACCAGTCGATTATGAAATACAGCAGGAAATAGCTTAAATCGATTGATTGAAGAGGGGTAAAAGGCGACATAAATGCCGCCCATTACCGTTGACGGCCATCGGCTCCTCAGCCTGTGCCGTGAAGATATTGTAACAGGATCATTACCGTTGTGAAAATACCTTGGGTGAATGGAACGGCTCTATCGTTCCAGAGGGCAAAAGCCCTTTCTCTTCATCTGTTTAAAGTTAACATGAGAAACTAAAATGATAGGAAATACAAAATGACAAAAATCACTTGAAACAGCCAAAAAATATTTAGAAAACTGTCCGGAAAAATGTTTGACACATCAGGAGATCAT # Right flank : CTCTTGTTGTTTTCAATCGCCATTGTGATGTGTCAACAAACAGTGACAACATTCGCTCATCCATCGACCAGCCAACAATTTGCCTAGAGAATAAGTCAATGACAACCGCTAAATATAACCAGCCTTCCTTGGTGGCAATATAGGTAATATCACCCACATAGTAGCGATCAGGTTGAGAGACAGTAAACTCTCTTTCCAGTAAATTTGGAGATATACGCTTATTATGCTTGGAATTAGTCGTCGCTTTAAAGCGTCTCTTCGTTTTACAAAACAAACCGGCTTTTTTCATTAATCGACCAATTCTCCGGCGGCTTATATGAACGCCTTTTTCAGCCAGTTTTCTTTTAAGACGACGGGTTCCATAAGTCTTGCGACTGTCTTCAAACAGTTTTTTAGCTGCTCAGTAAGCGCTTCATTTTCTTTCTCTCTATCCGTTTTAGGAGAGCTAACCCAATCATAATAGCAACTACGGGAAACATCCATAAAACGGCACAGAATCG # Questionable array : NO Score: 8.26 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:-0.93, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.30,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 7 3829917-3832155 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEHGE010000001.1 Sulfur-oxidizing endosymbiont of Gigantopelta aegis strain Gae_SOB scaffold1_size4213896, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 3829917 31 96.8 34 ..............................A CAATTTCTTGTACTGTTTTACTCCAAACATTTCT GG [3829934] 3829984 31 100.0 34 ............................... TCACATGGGGAAAAGCGCGCACGGGGAAATCAAT 3830049 31 100.0 33 ............................... GTAAAAACAAAAAATCATGGGACGTTCTGAATT 3830113 31 100.0 33 ............................... CCCAAATACAATTTTAAATAACTCGCAGATAGA 3830177 31 100.0 34 ............................... TAACTGCAAGATACGTCCCGAAAAATGATTGACC 3830242 31 100.0 34 ............................... CTTGCTTGCGCGCTTACCCGCGCCAGCCTTAGCT 3830307 31 100.0 32 ............................... GATAAAAAAATACGACCGTTAACAATAGCAAT 3830370 31 100.0 34 ............................... ATATCGGGCGCAGCATTGTTAGACGGAGAGCAAA 3830435 31 100.0 34 ............................... TTTTAATATCAATTTAGTTATATTTTGCCACCAT 3830500 31 100.0 34 ............................... TTATCTATTAGCGAACTAATCAATGATTTTTTGT 3830565 31 100.0 33 ............................... AATTTTATAATGTTTAATATCTGATTTTAAACA 3830629 31 100.0 35 ............................... AACTTAAATTGTTGATTTTTGTAGTGATTGCAGTA 3830695 31 100.0 33 ............................... CCCATCCCATTTCTCTGCGGATTTTGTTATGAC 3830759 31 100.0 32 ............................... TTTATATTCGATAAAAATTCTAATAATTCGAC 3830822 31 100.0 34 ............................... ATCGCGCTTGATTGGGTTTTGCATATATTGAGCT 3830887 31 100.0 36 ............................... CGCCATCCCCAATAGTATAAGCGACAAATTCCCCGA 3830954 31 100.0 33 ............................... TACAAATCCGTCTTTATAATCGATTACTTCAGC 3831018 31 100.0 32 ............................... AGTTGTTGGTTTTCCATCGTAAATAATACGTT 3831081 31 100.0 36 ............................... TAATCTCTATAAGCCACTCTTTAATTTTTTGTTTTT 3831148 31 100.0 34 ............................... GTACTGCATTGTATTAATCATTGAATCTCAGCGG 3831213 31 100.0 35 ............................... AATTCCTATAAATTATATTGCCGAGGCTTTTGCAT 3831279 31 100.0 34 ............................... GTTTTGCGGGGAGCGTCAAATATGTCAAAGATGA 3831344 31 100.0 36 ............................... TATAATTTTTTTAGTAATGGCGTTATCTATTTCTGA 3831411 31 100.0 35 ............................... ACCGCAAGCACTGGCACATTTGCAGAATTAAAAAG 3831477 31 100.0 34 ............................... ATAAGCTGCAATAACACAATCTGCCCAAGTTTTG 3831542 31 100.0 33 ............................... ATTAGTAGGCTTTGGGTTTACTGGCGATCAGGC 3831606 31 100.0 34 ............................... ATAAAATATTATCTGCAATTTTATTTGTTGATAT 3831671 31 100.0 34 ............................... AGAAACACTTGCTAAAAATTATTTAATTACCGGT 3831736 31 100.0 33 ............................... TCCCAAATATGAATCTATTATATACTGTTACGC 3831800 31 100.0 33 ............................... CATGTTCGACTTACATCCCCAATTGATTTTTAC 3831864 31 96.8 36 ..............................A CCCTTGAGTGTTTGAAATTGCAGGATCAACTGCAAT 3831931 31 100.0 33 ............................... CGGAACGTATCTTGCAGTTAAAAAAGCGAATAA 3831995 31 100.0 35 ............................... ATTGAAAAGTGCAGATTGTTCATCGCGTTTGATGG 3832061 31 100.0 33 ............................... TATTGTCAAGTGTCATGTTGACAAAATGTATTT 3832125 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ==================================== ================== 35 31 99.8 34 GTCGCGCCTTCACGGGCGCGTGGATTGAAAC # Left flank : GCCAACAATTTGCCTAGAGAATAAGTCAATGACAACCGCTAAATATAACCAGCCTTCCTTGGTGGCAATATAGGTAATATCACCCACATAGTAGCGATCAGGTTGAGAGACAGTAAACTCTCTTTCCAGTAAATTTGGAGATATACGCTTATTATGCTTGGAATTAGTCGTCGCTTTAAAGCGTCTCTTCGTTTTACAAAACAAACCGGCTTTTTTCATTAATCGACCAATTCTCCGGCGGCTTATATGAACGCCTTTTTCAGCCAGTTTTCTTTTAAGACGACGGGTTCCATAAGTCTTGCGACTGTCTTCAAACAGTTTTTTAGCTGCTCAGTAAGCGCTTCATTTTCTTTCTCTCTATCCGTTTTAGGAGAGCTAACCCAATCATAATAGCAACTACGGGAAACATCCATAAAACGGCACAGAATCGTTACCGGGTAATCTTTAGCCTGATCAGTTATCCATGCGTACTTCACAAAATTATTGGCTCTCTCAATATA # Right flank : CATTGCGTCGATTTGCGAGTGCTGTGATATTGTCAGTCGTGATGTGTCAACACTTTTCCGGACAGTTTTCTAAATATTTTTTTGGCTGTTTCAAGTGATTTTTGTCATTTTGTATTTCCTATCATTTTAGTTTCTCATGTTAACTTTAAACAGATGAAGAGAAAGGGCTTTGCCCTCTGGAACGATAGAGCCGTTCCATTCACCCAAGGTGTTTTCACAACGGTAATGATCCTGTTACAATATCTTCACGGCACAGGCTGAGGAGCCGATGGCCGTCAACGGTAATGGGCGGCATTTATGTCGCCTTTTACCCTCTTCAATCAATCGATTTAAGCTATTTCCTGCTGTATTTCATAATCGACTGGTGACAAATAATCATTAGCCGAATGAAGTCGCTCCCGATTATAAAATACCTCAATATATTCAAATATTGCCTGCTTTGCTTCTACTCTGGTTTTGAATCGACAATGGTGCGTCAATTCAGTTTTCAAACTATGAAA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //