Array 1 25231-25005 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJCJ01000027.1 Bacillus thuringiensis strain 4P1 NODE_27_length_59994_cov_140.031527, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 25230 30 100.0 35 .............................. GTTTGAGCAGCAGTTGCTTTCATCACCTGTTTCTT 25165 30 100.0 36 .............................. TTTTTTTAAAATCGTTGTATCTGGGGTCTTTCTGAG 25099 30 100.0 35 .............................. ATGCATTCTTTATGTGCAGCCTGGTATTTTCCTGA 25034 30 80.0 0 .........A...G......A.T.A.G... | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 95.0 36 GTTAAAACATAACAATAGATGTATTGAAAT # Left flank : ATTGAAATATTATGAATGGATACATACAGCACGAGCTTCCTTCGTTAAAACATAACAATAGATGTATTGAAATTTATCAGCAACCATTAAATAAAGGGCGATTGCTGAAGTTAAAACATAACAATAGATGTATTGAAATACTTATTAATAAGTCGGTAAGAGCCCTCTATTCAGGTTTTAACAAACTAATAGATGTATTTAAAAAGAAAACAAATCAATAAGAAACCCTGGGTGCAAGAGTGTGAATTATTAAATTTTTGGTGAATTTCCACGCCATAAATGGAGAAGTGATACACGGTAAATTTACCAAGTGTCAACGCTCCATAAGGTAGTATCGAATGTTAAATAAACATTGATACATAAGCATCCTGGATGCTTTGAAGGGTGTAACACAAAGACCGTTACATAATACATTAATTCGCTGATAAAAAAGCAGGATATTGTTAATATACAAGGGATCGTCGCACAATTCATTGTTAATCTTCTATATATTATCGGGG # Right flank : CTCATAGGGATTTGATTATATTTGTTTATAAATAGAAGCAATGTTATGATATAAATAATTCAATACTAAAAAATCAGATTGCAAAAGGACACACCTACGCATAACCATAGCGTAGGTGTGTCCTTTTTTTGTTTAAGGAGGAAAAGTTATGGGGAAAACGTTATTTATTGCAGAAAAACCAAAAGTGGCCAATGAAATTATGAAGTCGCCACGATTCCGTCACTCACAAAAGTACATTGGGAGCAAACCTTATTACGGTTATTATGAAAATGATCATTATATTGTCAGTTGGTGCCGCGGACATTTACTGGAACTGAAAAATCCGGAAGAGATGGATCCAAAGTATAAAGTGTTTCAGTTAGAACATTTACCTTTAATTTTTCAACCATCGTATAAGGTGATACAAGAAAATGCAGAGCAACTACAAATACTTGTTAAACTGTTACAACGACCTGATGTTGACCATGCGGTGAATATCTGTGACGCGGACCGCGAGGGAG # Questionable array : NO Score: 5.61 # Score Detail : 1:0, 2:0, 3:3, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAACATAACAATAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 2 25820-25527 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJCJ01000027.1 Bacillus thuringiensis strain 4P1 NODE_27_length_59994_cov_140.031527, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 25819 30 100.0 37 .............................. TTTAAAGATTTTTGAACCTTTCCAGGAGTTAAACCCA 25752 30 100.0 35 .............................. ATTATGAATGGATACATACAGCACGAGCTTCCTTC 25687 30 100.0 36 .............................. TTATCAGCAACCATTAAATAAAGGGCGATTGCTGAA 25621 30 100.0 35 .............................. ACTTATTAATAAGTCGGTAAGAGCCCTCTATTCAG 25556 29 83.3 0 ...TT....-...............T...A | T [25543] ========== ====== ====== ====== ============================== ===================================== ================== 5 30 96.7 36 GTTAAAACATAACAATAGATGTATTGAAAT # Left flank : CTATACAAGTCAACGATGTAGTGAATGTGGGTATATCCACAAAAATAATCGGCAAGATCAATCTACCTTTGAATGTCAGCAATGTAGTTTTAAAGTTCATGCAGACTACAATGCCGCAAAAAACATTTCTGTGTACAATATTGAGAAGGTAATACAAAAACAATTGGAGTTACAAGAAAAATTAAATCAAACAAAATATAAAGAACAGTATATAGAACAAATGAAAAATATTAATTAAATAACGTAGTAGGAAATAGTTTGGCGGATTTCCACGTCATAAATGGAGAAGTGATACACGGTAAATTTACCAAGTGTCAACGCTCCGTAAGGTAGTATCGAATGTTAAATAAACATTGATACATAAGCATCCTGGATGCTTTGAAGGGTGTAACACAAAGACCGTTACATAATACATTAATTTGCTGGTAAAAAAGCAGTATATTGTTAATATACAAGGGATCGTCGCACATTCATTGTTAATCATCCATATATTATCGGGG # Right flank : AGAAAACAAATCAATAAGAAACCCTGGGTGCAAGAGTGTGAATTATTAAATTTTTGGTGAATTTCCACGCCATAAATGGAGAAGTGATACACGGTAAATTTACCAAGTGTCAACGCTCCATAAGGTAGTATCGAATGTTAAATAAACATTGATACATAAGCATCCTGGATGCTTTGAAGGGTGTAACACAAAGACCGTTACATAATACATTAATTCGCTGATAAAAAAGCAGGATATTGTTAATATACAAGGGATCGTCGCACAATTCATTGTTAATCTTCTATATATTATCGGGGGTTAAAACATAACAATAGATGTATTGAAATGTTTGAGCAGCAGTTGCTTTCATCACCTGTTTCTTGTTAAAACATAACAATAGATGTATTGAAATTTTTTTTAAAATCGTTGTATCTGGGGTCTTTCTGAGGTTAAAACATAACAATAGATGTATTGAAATATGCATTCTTTATGTGCAGCCTGGTATTTTCCTGAGTTAAAAC # Questionable array : NO Score: 5.90 # Score Detail : 1:0, 2:0, 3:3, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAACATAACAATAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //