Array 1 20824-23670 **** Predicted by CRISPRDetect 2.4 *** >NZ_PNRD01000002.1 Rheinheimera aquimaris strain B26 Scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 20824 28 100.0 32 ............................ ATAAGGTAGAGACAGCGTTGCTGATGTGGTAA 20884 28 100.0 32 ............................ TGACGCAATGGCCTTTTGCATTTCAATGCACT 20944 28 100.0 32 ............................ TACCGCGATAAATACGGCCTTGTCAGCATTCG 21004 28 100.0 32 ............................ GCTGTATTTCACCGATATCATGTGTAAGCAGC 21064 28 100.0 32 ............................ ACTTTCAAAGGTTTGGGAAAGTTAGGGAAAAT 21124 28 100.0 32 ............................ AATGAGCGCATTGATCAATGCAATGAGCTTAT 21184 28 100.0 32 ............................ ATGCAGCCCAGGCCGATGATCACCCAAAGACC 21244 28 100.0 32 ............................ AGCAAATGCCCCGGCAGCATGCCTAACTATCC 21304 28 100.0 32 ............................ ACAGCGAAATTGCCCGCCGTGACGCAATGGAA 21364 28 100.0 32 ............................ GCTGGCTGGTTGCACTGATACTGCTGCCCTGC 21424 28 100.0 32 ............................ TGTCAGAGGGTGGCGATAACGCACCGGTGGCC 21484 28 100.0 32 ............................ TTTACCCATCACTTGCACGTTAACAGTGTTAC 21544 28 100.0 32 ............................ AACAACACGGCGCGAGCAGCGTCGCTGGCCAC 21604 28 100.0 32 ............................ CTATTGACGATAAGGTGATCAAACCCGTTGTG 21664 28 100.0 32 ............................ ACGAATACAGCGAAGTTGATACAGATTTACCG 21724 28 100.0 32 ............................ TGCGCCCTGATCACCATCATCAGTAAACGGTA 21784 28 100.0 32 ............................ CTGTTATCAGGCGGTGCCAGCGAGGACGTCGC 21844 28 100.0 32 ............................ CGGATAACCCGCAAATACTGCAATTTGCGCTA 21904 28 100.0 32 ............................ CACCGTCGTAACGTGGCGTGACACTAAGTTGC 21964 28 100.0 32 ............................ TTGTCAGTGTATAGGACTATCATTATTCACCC 22024 28 100.0 32 ............................ AAGCTGCAGCTGAGCAAGCACGAGGTGTGCAC 22084 28 100.0 32 ............................ CTGCGCAATACCAAAGGTTTGACCATGAGGGA 22144 28 100.0 32 ............................ CATTGCGCCAACGGTATATTCAGCGCCGTCGA 22204 28 100.0 32 ............................ AGCAGCAAGCCCAACAACAGCAACAGCTGCAA 22264 28 100.0 32 ............................ TGCAGGCCATAGCACACAACCCACACCCACAT 22324 28 100.0 32 ............................ TGGGCCAGGTGGTCAGCCACAAACAGCGTTTC 22384 28 100.0 32 ............................ TGCCCGGCAATAGTCGTTAAGTCCAGGCTATC 22444 28 100.0 32 ............................ TCTGACCGAAAGCAAGTGCTTGATGCTGTATT 22504 28 100.0 32 ............................ TGGTTGGTATTCCGTTGGCCTTGGTAGGACTG 22564 28 100.0 32 ............................ TGTTTCAGCATCAGATTGATTGGCAGCGCCTT 22624 28 100.0 32 ............................ AAGGGGCAGAGTCAGAAAAGTTTGTCGATTTC 22684 28 100.0 32 ............................ TGATCACAGTTAGACGCCAGCCCCTTACCAAA 22744 28 100.0 32 ............................ GGTACCCAGTTGGCCGCGCAGCTCGTTAACCT 22804 28 100.0 32 ............................ GGGTTGTACAGCATCACCTTGAAGAGTTCGTC 22864 28 100.0 32 ............................ CAGCACCCGCTTAGCCAGCCGGTTAAGTTTCC 22924 28 100.0 32 ............................ GTTAAGCATCTGAACCAATGAGCTAACGATCA 22984 28 100.0 32 ............................ GCGCATATTTCGTTATCCTTAAGCATGTTATG 23044 28 100.0 32 ............................ TGGTACCAGACACTGAGCATGGCCTTGTTTGG 23104 28 100.0 32 ............................ AGATTGTGCTCAAGCGCGTACTCGGCCAACAG 23164 28 92.9 32 G..........C................ AAACACCAGCTGGTCCAATGAAATATTAAATA 23224 28 92.9 32 G..........C................ GAAGAAATGCAGCTGCAGGGGCTGTTTTTCAC 23284 28 92.9 31 G..........C................ TTAAGCATTTTGCACAAAATCGGGGTAACAA 23343 28 92.9 32 G..........C................ CAGCGACATCGCTTCGCTCTGATCACGGGGTT 23403 28 92.9 32 G..........C................ CCATGAAACGGGCCGCTAAGGCCACTGTTGAT 23463 28 100.0 32 ............................ TGCATAGCCAACAAGAACACCGCAGTACCAAC 23523 28 100.0 32 ............................ TAACCTTTGGGCAAATAATTGGCCTTTACCTG 23583 28 100.0 32 ............................ AAGCTGGCACCATGCAAATGGCGACCGGTGTT 23643 28 89.3 0 G........T.C................ | ========== ====== ====== ====== ============================ ================================ ================== 48 28 99.0 32 CTTCACTGCCGAACAGGCAGCTTAGAAA # Left flank : TTGGAAAAGTTGATGGCTGAAAATTGGCTAAAAGGGCTCAGAGATTACTGCCAATGCAGTGCGATACTGCCAGTGCCAGCTAATGCCAAGCAGCGTTATTTTGCCAGACGGCAAGTAAAAAGTGCACACAACAAGAGACAGCGTTCAGTCAGAAAAGGCTGGTTAACGCAGGAGGAGGCATTGGATAAGATCAGTGATGAGTCGCAAAAACTTTTGAAACTGCCATTTTTGCAACTAACCAGCCGTGGCAATAAACAGCAAATGAATGTGTTTGTGGAGCAGGGGCCTGTGGTGGAACTGCCGACAATAGGGAGCTTTAATTCTTACGGATTAAGCCGACTATCCGAGAAAGTAACGGTACCTTGGTTCTAACCCTTTTTTCTAAGCTTAGCTGCAGCCCTTACAACTTAAGGGCTGCATTTTTGCTTTAAAAAAAGGGTAAATCAGTAAAAGAACCAACAGCTCTTTAAAAATCAGTATTTTAGTGCTTAAATGCTCTA # Right flank : ATTAACGTATCACCAGCGCCAGAGTGCAGCGCCTTTTGCTCCCGCCCGGCATCAGCCGGACATTTCACTGTGTTTTGATCTGTTTTTCGTAAGTGCGGGGATAGATTGTATAGCCAGTCTGCCTCTAAGCGCACCATCAATCACAGCAAGCCTGACGATTGGAGGCTAACTAGGTAAACAAGTTGCTTACTTGAGTAATCTATTGATTTAGCGCAGCTGCAGATTTAAAGTTGGGCGGTCTTAAAGGGTACGGAAAATGCCAAAGCACTTCGCCGAAGTGGCGAGGTCTAAGAACACTAAAACAGCCGATAAAGCCGGCCAAGGAATGCATAAAATGACGACTATTGCGACTGTAATCATCCCGCTGCAGGAACTGGATGCAATGCGTGACCGTATCATTCAGTTAGAGAAACGTCTGGAAGACGAAGTGTATCAGCCGCTGGAAGTTACTATGGCTAGGGTGAAAGGGGTTGGCTGCCTGGCAGCCTGGATTGCATACA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGAACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGAACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //