Array 1 1274664-1275532 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT632547.1 Actinomyces urinae strain Marseille-P2225, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 1274664 36 100.0 28 .................................... GATTGCGACGTCTAACGCGGACGCTTTG 1274728 36 100.0 28 .................................... CACTGCGATAGCGATAAGTCGCTTGTAT 1274792 36 100.0 28 .................................... TAAGCAGTGAAGCAGTTAGCAGTTTGGA 1274856 36 100.0 28 .................................... CGGCCTTCAAATGACCGTAAAAGAGTTC 1274920 36 100.0 28 .................................... CAGCATGAGAGCTAAACACAAACGTAGT 1274984 36 100.0 28 .................................... TCCCCCACTTCTTGACCTGCCGTTGTTT 1275048 36 100.0 28 .................................... CTAGGACCGAGCGGGCGGCTTGGGTGTC 1275112 36 100.0 28 .................................... GCCGCGATCGACGCGCTGTTCATTAAGC 1275176 36 100.0 28 .................................... ACGCCTTGGTATCGTTATTGGCGTGCTC 1275240 36 100.0 28 .................................... GCATAATCCAGGTAGCCAACTCAACCAC 1275304 36 100.0 28 .................................... AGTTTTTGTACCTGCATGAGAATCTCCT 1275368 36 100.0 28 .................................... AGCCTCGAGGTAGGCCGCCGCGTGGCTG 1275432 36 100.0 28 .................................... TCGTGACTCACTTATTCGGGGTTTGCGT 1275496 36 86.1 0 ........................GC...C....GA | G [1275527] ========== ====== ====== ====== ==================================== ============================ ================== 14 36 99.0 28 CAAGTTTATCAAGGGGAATGAAGACTGATTCCCAAC # Left flank : GCCGTTTTCAGATGAGGGGCATACCATTCCAACAGTTTTTCAAATGCTAGCTCAAAGTTATGGGCGCTATGTTGAAGGAGAGATAGACAAGTTAGAAATACCTGCCTGGAACCCTATTGAGGTAGTTAACCGTGGCGGATGATCCTATGTGGATGCTTGTCATGTTCGACCTTCCTGTGAAAACCAATGAGCAAGTTCGGCTTGCTAACAGGTTCCGTACGATCCTTCTTGATTCTGGGTTCAGCATGGTGCAGTTCTCTATCTACGCGCGATACACGCCCGCAGGTGGTAGTGACACTCGCATGCTTAGGATTATCAAGTCAAACGTTCCGTATGGAGGTAAGGTTCGGATCTTGTTTTTAACTGATAAACAATGGTCCGGGATGGCTAAATATTCCAACGCAGTGGAAGAGAAACCAGAAAAAGCTCCCGAACAGCTCGCTTTTTTCTGAGTCAAAAACCTCTTGAGGCCCGCAAATTCAACGAGAATTTGCGGGCCT # Right flank : AGGGCCCCGACCTGTTGGTCGAGACCCCATGACAGCAACTAGGCTTACGCCTCTAATACTGATTTTGGTAGGCGATGCACTGTCACCGCACCAACCGCGTTGAACGGGTGTAGTGGGTCCGGGTTTTCAGAGCCGGTGGGCCCACCGAGCTCCGAGTGTGCCAGGGCGCTCATCACCACGTACGCATCGCCCGCGTCCCAACCATTATCGATGGTAAGGAAGTCGAACATATCCTCATAGTCATTAGTGATCGACTGCTGCACCGGGTTTCCAATACCTATGAAAACCACTCATCAGCCGTCTCAATGCGGGGTGCGCGAATCTTCTTACCCTTAACCAAGTCAACCTCAACCACAGCTACGCCCTCAGCCTCGATAGCCACAAATGAGTATTCGCCGCGCGCCATAATCGCGTGAATATCGCCAATGGAAAGGTAAGCGCCCTCCACCTCAACAGGTAGATACACGATAGAGTCTTGCTTACTTCCGCGTCGTCGAGCC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGTTTATCAAGGGGAATGAAGACTGATTCCCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //