Array 1 804-4011 **** Predicted by CRISPRDetect 2.4 *** >NZ_UGSB01000001.1 Oligella ureolytica strain NCTC11997, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 804 28 100.0 32 ............................ TATTCTAATAGTAGTAAGTGCTGAAGCTAACC 864 28 100.0 32 ............................ GAAACGGAAAGTGAGCTCATCGAGTGGGTAAA 924 28 100.0 32 ............................ AAACGTTTTGTGTATAGCGAGGTTCATGTTCA 984 28 100.0 32 ............................ TAGTAGTGATACTTTAAGAATCGCCTTTAAAA 1044 28 100.0 32 ............................ TTCAAAAATTGCGATAACTTTACCCTACCTTT 1104 28 100.0 32 ............................ GCATGGCATTTGCATGTACCCCACACCGTAGA 1164 28 100.0 32 ............................ AAAGACATGATTACTGATTTAGAAGCCCTGCA 1224 28 100.0 32 ............................ GCTACCGTCTGCAGCTTCTGATATGCGTCTAG 1284 28 100.0 32 ............................ ATATTGACTTGCCCCTCAGTCGCAAATGTGCG 1344 28 100.0 32 ............................ AACTAACTGGCTATTAACCAAGTATCCAGACG 1404 28 100.0 32 ............................ TTCGGGTGGTTTTTTTGTGTCTATACAAATCA 1464 28 100.0 32 ............................ ACTCGTTGGCGTCTCGCTTAGTCTTAAATCGC 1524 28 100.0 32 ............................ CAGAAGTAAATGGCGAGGAGTTCTTATTCATA 1584 28 100.0 32 ............................ ATCAGAAGCGACCGGTGGCTCAGTGATAACAG 1644 28 100.0 32 ............................ AATCATCACTCGGTCGTCTGCAATGGCTTCTA 1704 28 100.0 32 ............................ GAATAATGGCTTAAGCGAATACTCAGGACATG 1764 28 100.0 32 ............................ ATATGAATCAGCACTTACAAGAAAATGTGTGG 1824 28 100.0 32 ............................ TACTCGCCGACATGAATATTTTGTTCTTACCC 1884 28 100.0 32 ............................ ATCATCTCAAAGTCTTCAGCAAGAGCTGCTTC 1944 28 100.0 32 ............................ TAATTTTTAATGAACAAACTAATTAAGTAAAA 2004 28 100.0 32 ............................ TTGATATTACTTTCGTTAATAGCTAGCAGCGA 2064 28 100.0 32 ............................ TGCTTTTGAGGATGAGCTAAGAGCAGCTTTAT 2124 28 100.0 32 ............................ TCAATCGGATCACACGGAGTTAGCGACTGATA 2184 28 100.0 32 ............................ TGAAGATTGGAAGCGCTTTGCTCCAATGCGAA 2244 28 100.0 32 ............................ TCTTCAGAAAGTCTGTGGATTTGACTAAACCC 2304 28 100.0 32 ............................ TCCCATCACAAGCAATGTACAGCCCAGTTAAA 2364 28 100.0 32 ............................ TAAATATCATTCCCCAAAAGCAGCTTCCATCG 2424 28 100.0 32 ............................ TGCATCACCAACACCTCCCACTGTCTGCAAAT 2484 28 100.0 32 ............................ TGCAGCTAACACCAAAAGTACCCGCGGCAAAA 2544 28 100.0 32 ............................ AACATGCCTCCTGTAGCAGCCCAGTTTTGTGC 2604 28 100.0 32 ............................ AAGCAAGATGTGCCGGCCGGCACTCCTGTGTC 2664 28 100.0 32 ............................ TGAAAAGATAGTGTGTATCGCTCTCCTGCAAC 2724 28 100.0 32 ............................ TTACTAAGCGACAACCACTAATTCCAAGTGAA 2784 28 100.0 32 ............................ TTACGGTGTACCGGCAATACGAGGGACACATA 2844 28 100.0 32 ............................ GGAACGATGCTGCAAGTAAAATCAGTCGTACC 2904 28 100.0 32 ............................ TGCTGTTGCGTCACTTACGACTGAGTCTCAGC 2964 28 100.0 32 ............................ CGTGGTTGCTATTGATTCTGACGACAACAAAA 3024 28 100.0 32 ............................ TCTAATGCTTGAATAGTGGACTCAAGGCGATA 3084 28 100.0 32 ............................ AGTAGACAGACCAGGCTTGCCCTACGCTAATA 3144 28 100.0 32 ............................ ACGAGGATAATTAGTGCCAACAAGTAAGTTGT 3204 28 100.0 32 ............................ TCTTGAATGATAACTGCATCGCTCGTACCACT 3264 28 100.0 32 ............................ TAACGATTTTAGCGACAGACATGAGCAGCATC 3324 28 100.0 32 ............................ TTTTTTAACGCGCTAGGCGTTGGCGTGGTGGA 3384 28 100.0 32 ............................ GTAAAAAAATTAAACAGTCGTCGCAAGCAGTA 3444 28 100.0 32 ............................ CCTCTAGAAGTGCGTTATTGTGTGTCGATACC 3504 28 100.0 32 ............................ TCATAGCTAGGCCGTTTGCATGTGCTTAAGCG 3564 28 100.0 32 ............................ ATTGGCTTTTAAACTTTTACATTAAAACAACA 3624 28 100.0 32 ............................ ATTTTATTTATTCCTTAAAGGCAGCCTGACGG 3684 28 100.0 32 ............................ ATCTCCCGTAGCAAACTGAAAAGGTACCTCTT 3744 28 100.0 32 ............................ ATTTACATATCTTGCGAATCTTGTTTAAGTTA 3804 28 96.4 32 ......T..................... ATTATTATCAAACCGACCTAAAGCCCAATGCA 3864 28 100.0 32 ............................ AAAGGCGTTATCCGCTTGGAAGCCCTCTAGCT 3924 28 100.0 32 ............................ TTAAACTGATATTAATCAATTATTCAATTGTA 3984 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 54 28 99.9 32 GTTAGCCACCGCACAGGTGGCTTAGAAA # Left flank : GTACCTGAAAAGTCTAATTGTTATTTGTTAGTTAAACGCTACCGAGTTGACATGAATTTAGAGAGTTTAACTCGCAGGTTTATGCAACGAGAAAGTAAAAGAACGGGCAGAGAAATTAGCTTTGAAGAGGCTAGAAGTATACAAAATCAGCGTTTTGCTAAAATTAATAACTTAACCATACAAGAGGCTGAAAAACATTATGAGGAGCCAAATGTAAAGAACTTACCATTCATTAAGTTGAAAAGTTTGAGTTCAGGAGAGGAATACTCTTTGCTAATAGAACAGATTAGCTCTGAGCGACAACGTATTGGTAGCTTTAATACTTATGGGTTAAGTAGTCAAAGCACTGTTCCACACTGGTAGTGTAAAAATACCTTTATTTTTTTCTTTAAAAATTTGGAATAAAAATCAATGAGTTACATTAGGTAGTAATATTTTGGTAAAAAAAGGTTTTATCAATAACTACTTGATGTAGCTTATATTTTTCGGTTATTATTGTT # Right flank : ACCAGTCAGCACTTTGTGTTCGCTGACACAATAGATGTTTTTTAATTGAGTTTATTAGAGTGAAGCTATGGAATGATAGAGTGTAGCTTCTACAGTGATACGCTTATAGAGCAGTTTATCAAAGGAATAATTACGCCTACTAAGCAGTATCCTGCCATTTTAGTACTAAATTGAGCGTCCTATAAATATAACATATCACCGAAGTTATCAACTTTGAGCACAAGATATGTGATGCCAATGCTTTGACTATGGATAAAAAGCTCAGATTACCGTCTTTTAAATAGCAGGCATTGCAAAAGTAAGGCGCTTTTTTTATATTATTCAAGACAGTTCATAAATTAAACTGTTATTTTGTCAATTCTTGACGTGATTAAGCCCAAATTTTAAGGTTCAGAAAACGCCGCATTACGACAATAGCTTGCTCTCAGTCACTAACTAAAATGGAGTATATAAGTGTCTTTTCTACTGGTTTTTCTTGGTGGTGGTTTAGGATCTGTAGC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGCCACCGCACAGGTGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 2 1052045-1050908 **** Predicted by CRISPRDetect 2.4 *** >NZ_UGSB01000001.1 Oligella ureolytica strain NCTC11997, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================================================================== ================== 1052044 32 100.0 34 ................................ CAGCGGATAGAAACAACGCTCACGGCTTTGGCTC 1051978 32 100.0 34 ................................ TAGCGGCATTGATCCACAGTCAGCTATGCGGCAT 1051912 32 100.0 34 ................................ ATATTTTTACTCATAAAAATTGCACTCCAATTAT 1051846 32 100.0 35 ................................ AACACGATCGGTAGGCGCATTGGCGCGATGACGCT 1051779 32 100.0 33 ................................ AGAAGATTGTGGGGATACCTTTGCCCGTGTTAC 1051714 32 100.0 84 ................................ AATCGCTTTTAAATAAGGGTCCAGTATAGAACGTCAACTACTTTGTCCGGCGCATTGACTCATCATTTTTGCTACTTTCCTTAA 1051598 32 93.8 34 ..A.T........................... GGCTGTAGTCTGGATATGTTCAGGCTTGAACTTA T [1051594] 1051531 32 100.0 34 ................................ TTCACTACATCGTTTGTCTCCATAAAGTGATTTA 1051465 32 100.0 33 ................................ ATCTTAGGTGGTTTATTAGCCTTTATTGCTTTC 1051400 32 100.0 34 ................................ CTGGCACTCTCGTTTTGTCGGAAAAGATGACGTG 1051334 32 100.0 34 ................................ GCAAAGTGCTTTTTGAGCAGCATGGACAATCCGG 1051268 32 100.0 33 ................................ AGAAAAAAAACATTGTATCTATTTTTGTTTTGT 1051203 32 100.0 34 ................................ TTCACTACATCGTTTGTCTCCATAAAGTGATTTA 1051137 32 96.9 34 ...........T.................... AGGTTTAGCGATGTTAGAGCAAGTAACGACCGCA 1051071 32 100.0 34 ................................ AGAGCTACCAGATGTTAGGCGTGTAGAGGTTTAC 1051005 32 100.0 34 ................................ TTCCGCCAAGCCAGTGCGAGTAATTACATCAACG 1050939 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================================================================== ================== 17 32 99.5 37 GTCGCGCCTCACGCAGGCGCGTGGATTGAAAC # Left flank : TAGCCTGTCTACGAATGATCGTAAAATCCACCTGCAATTGCTCACCCGGGGATGTTTCAAAGCGCACCACTGGGTCGGCTTTAGTTACTGGTTTAAACTGAGACACATAGTCTCTCAGTAAGCTAATCTTACCTTGATAACCCAATTCGTCAATCTCACGATACAACACCGTGGCGGGTATCCAATCTGGCGCGGCTGCTTGAATGCGCTTGTGAAGATACGCTTTATAAGGGTCAAGCTTACTGGGTCTAGGGCTGCGTTGGTAGGTAGGCATAGCACCACCATTTCTAAGATATTTCCTTACGGTGTTACGGGAAATACCGAGCTCATCACTTATTGCTCTAATGGACTTGCCTTGTTTATGTAATACGTGAATCGTCACGACCATCTCCTGAGTTAACATAAGCGGCCTGAAAAACCGCTAGTTTATTAAACTAGTGGGTCAATATTCAACCGTTGATCATGGGTTATTATTACATTGGTGCCAACAAGGATGTTCT # Right flank : TAATTTAGTTAGCTCCTGTCTTCAGCGTTTTTCGGGGTACCCGACTCATCATCTTTTAAATCAATGGTTTAAGCTAAGAACGAGAGTGTCTTAGGGTGTCCTAACGCTGAATACTGGAGCCATGGATTTGCTAATTTCAGCAATCTAATTGCTCAGGCTTGATATTAAGTGCCTTTGCTATTTTTTTCTAGTTGATAATGTAGGGTATAAAGAGTTTTCAAGCTGGAATATGCAGATTGAGAGATGCCTAAGTTTTTGGATGCTTGAGCTTGAGTCATGCCTAGATATTCTCTCCATGCTTTTGCAGGCGTATAGTCTTTGTCAAACATAAGGTCAACTATTTGATTTGGTACGCCATGCTCAAGATTGATGATACTTTGTTGTATTAGTTGTAAGTAGTCCGCATAAGGAAGAACTACATACTCAGGCTCACCCTGTTTTTACGGATTATTTGCTGGTTAGTATGTGCGTTCATCACGTTTTTTTACGTTTGAGCAGTA # Questionable array : NO Score: 8.99 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:-0.23, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCACGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCACGCGGGCGCGTGGGTTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.50,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,9.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 1057913-1054035 **** Predicted by CRISPRDetect 2.4 *** >NZ_UGSB01000001.1 Oligella ureolytica strain NCTC11997, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1057912 32 100.0 34 ................................ GGTTTGTGGTTTTTTACCCTTGTAACTACGCATA 1057846 32 100.0 35 ................................ GGTAATACCTGGTGGCAATTCCACCCCATTAAATA 1057779 32 100.0 34 ................................ ACAGTGGGCTTAGCAGTGTAGTGCAGCTAGGTAT 1057713 32 100.0 34 ................................ ATAGCATAGTAAGCAGTACAATATATTTCTTTTT 1057647 32 100.0 34 ................................ CGAAAAGCTTACTGACTTTACCCACTCGATGAGC 1057581 32 100.0 34 ................................ TTTTACTTGGTCGATTATGGTTTTATTGCTCATT 1057515 32 100.0 36 ................................ CTGATAAAAATCGTTTATTGTCAGCTCCTCTAGCAA 1057447 32 100.0 35 ................................ CCATTATCAAACACAACCGAAAAGAATCCATGGTC 1057380 32 100.0 34 ................................ CCATCTTATCAAAAGCGGTTTTAAAGTCTGAGAA 1057314 32 100.0 34 ................................ ATTTTCTTACTCCAGTTTTAGTTAATCATACTCT 1057248 32 100.0 34 ................................ GCTTATTCTTTGGTGAGCTATAGAAACGTATGTC 1057182 32 100.0 33 ................................ ATACATTATATAGCGTTATAAATAACGAGCAAT 1057117 32 100.0 34 ................................ TACTATCGTCATGGAAGTAGTGAGATATATTAAC 1057051 32 100.0 34 ................................ TGTCCATGTGAGTCTATTAAAAGGCTCATCTAAG 1056985 32 100.0 35 ................................ GAATAAAGTAATAAATTGCGCCTTAGTTAGCTTTG 1056918 32 100.0 34 ................................ AATGTCGTAAAACATTATCTTACTCATAATAAAC 1056852 32 100.0 34 ................................ CTAGTAATACACCTTCACCGGTGCTACAATCATA 1056786 32 100.0 35 ................................ ATTCCACTCGCTTGAGCAGATGCCTTTGCCTAGCT 1056719 32 100.0 35 ................................ GATTTGTGGTTTTTTACCCTTGTAACTACGCATAA 1056652 32 100.0 33 ................................ ATACATCATACACGCTTATATATAAGTAATATC 1056587 32 100.0 35 ................................ CGGGAGGTGACTACACTTGAGTATTATGATAAGAA 1056520 32 100.0 34 ................................ TCTGTGGTTGTCGCATGTACTGATACTGCTTATT 1056454 32 100.0 35 ................................ CTGTTCTAACAGGGGTAGGTCTCGGATTAGTGTAG 1056387 32 100.0 34 ................................ TATTAAATACTAATATCTAAGTAAAAAATAGATA 1056321 32 100.0 36 ................................ TAGTAGTATAGTTAGGGTTCAATTGATAGTATTAGA 1056253 32 100.0 35 ................................ AGGTCACGAGTTACCGCGCTGACCCGGAAATTCTT 1056186 32 100.0 34 ................................ TATTCATGCAGTAAACAAACAGCATTGAAAAAAC 1056120 32 100.0 34 ................................ TGCCATTTGAGTACAAGCGAACTGACCACCACGC 1056054 32 100.0 35 ................................ TACAATAAACAGGATACGCTGCCTCTCCTCTGACC 1055987 32 100.0 35 ................................ AAATACCATACTGTCTAACCAATCTAAGTAATCGT 1055920 32 100.0 34 ................................ TACTAAATAACTCTATAAAGAGTCGACGTCAATT 1055854 32 100.0 34 ................................ ATAGCATAGTAAGCAGTACAATATATTTCTTTTT 1055788 32 100.0 34 ................................ AATTAAGTGTTGACAATCATATTTGATTAGGTTA 1055722 32 100.0 35 ................................ GCGCCCTCCTCTATACGCCCCGATTGAATCGCCTT 1055655 32 100.0 34 ................................ CGTGTTACGAATGAGAAGTGACTCTCGGTCTCCC 1055589 32 100.0 33 ................................ CCCTATTAATAGCGTTAGACACGCTTGCTGGAT 1055524 32 100.0 34 ................................ AGCGCTGATGGTATCTCTTGTAGAAGATCCCAAA 1055458 32 100.0 34 ................................ AGGATATGGTTTATTATCTCCTGATTCTCCGACT 1055392 32 100.0 34 ................................ TTGAGCTAATAAGCGTGTTGATATAACCGCTTTG 1055326 32 100.0 33 ................................ TGACAAAGCGAATAGCGCCTTAAACGCCTTAAC 1055261 32 100.0 34 ................................ TCGCCTTTGCTCTATCAATAATCGACGGAACAAG 1055195 32 100.0 34 ................................ AGCAATTTCATCTTCTGTTGCTAACGCGCCGTTG 1055129 32 100.0 33 ................................ ACTAGGTAGGTGAGCATGAAAGGTAGATCGACA 1055064 32 100.0 34 ................................ AGCAACCGCCTTACCTGCTCTTTGCGAGTCATTG 1054998 32 100.0 35 ................................ CACTAGGCTCTCGGACCATTGGCAAGTACCCGGAT 1054931 32 100.0 34 ................................ TTCAATACTTAGACGAGTTAAGGCGTTGATGTCC 1054865 32 100.0 34 ................................ ACGTGCATAGCCCCTGCCCTACGGGTCAGGATAC 1054799 32 100.0 35 ................................ ATCACGCAAGGGATTGCTATTGCTACGTGACTATG 1054732 32 100.0 35 ................................ TCTTGTAAGGCTCGTCTAAGTCGTCCGTCGTAAAA 1054665 32 100.0 35 ................................ ATCACGCAAGGGATTGCTATTGCTACGTGACTATG 1054598 32 100.0 35 ................................ ATTATACTATAACGCCTTACAACGTATTACAGAGA 1054531 32 100.0 35 ................................ GATATATTAACTGCACTAGATGTTAACAAGGCTGC 1054464 32 100.0 35 ................................ TCGTTTAGTAAGGGTAGCGTGCCATAGGTTTTCCA 1054397 32 100.0 34 ................................ ATTACGGGCTAAATATTTGTAGTCGTCACTTACG 1054331 32 100.0 34 ................................ TGTTACTTGGAGGGGATTGTGGGTAAATTTATTT 1054265 32 100.0 35 ................................ ACGCGCCTTTAGCATGGCATCAGCCAAACTAAAAG 1054198 32 100.0 34 ................................ TTGTCGCAAGTGCTAGAGAAGACATCTGTCCAGC 1054132 32 100.0 34 ................................ TCGTGCTTTATCGGCAAAGAAAATATTAGTGAAG 1054066 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 59 32 100.0 34 GTCGCGCCTCACGCAGGCGCGTGGATTGAAAC # Left flank : GTTTAGATCCATTTGTTGGACTTTTGCATCAAGATAGACCTGGGCGGCCCAGTTTAGCGCTAGACTTATTAGAGGAATTCAGAGCATTTTGGGCCGACCGCTTAGTCTTAACTGTAATTAACCGTAAGCAAATTCAAGCGAAGGACTTTGTTACTGAGGCGAGTGGTGCTATGTTTTTAAAAGAAGATTCCCGAAAAAAACTACTAACTATTTACCAAGAAAGAAAACAGACTGAAATTATTCACCCGTTCTTACAAGAAAAAGTACCTCTAGGTTTGTTGCCGCATTGCCAAGCAACGTTATTAGCTAGGCATATCCGTGGTGATACTGAGTTTTATCCACCATTTTTGGTGAAATGAGGTTAGCGGTAACGCAACTTACTGATATTTAAATAAAAAATATTCGTTTTATATTTAATAATTAAATCCTTTTAATTAATTCCATTAGGTAGCGGAATTAATTTGGTTTCTCTTTGTTTTTTAACAAGTTATAATAATGCG # Right flank : ATCTCAAAATCAACAGACCTGAAGATGTCAACACCAATCTACATTTGACCCACTTTTGGGCTTATCCAACAATCTAGAATTGACCCAGCTAGACGTATTAACGTGGTGAATCTATGGGTAACATACCGACTTTTCTTTTATCTTTTAAGCGATAGCTTTCGCCACTAGCTTGAATGACATGACAATGATGCAACAGCCTATCGAGCATGGCAGCAGTCAGCGTTGCATCATCTGCAAAGGTGCCCGCCCATTGACTAAATGGCAGGTTGCTAGTCAATATGGTGCTCCCTTTCTCATAGCGTTTAGCCACCACATTAAAAAACAGATTCGCCTCCTCTCGCCCAAATGGCAAATAGCCGATCTCATCAATCACCAATAACTTTGGCGCAAGAATGATGCGGCTCATAAATGACTTCAGCTTGCCCTGTTGGTTCGCAGTCTTCAAGTGCAGCATCAAATCTGCCGCGGTGATGAAACGCACCTTTAACTGGTTCATCACC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCACGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCACGCGGGCGCGTGGGTTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.50,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.01 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //