Array 1 381-52 **** Predicted by CRISPRDetect 2.4 *** >NZ_CBLG010000116.1 Yersinia wautersii strain WP-930601, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 380 28 100.0 32 ............................ AGACCGGCGCATATCGAAAGGCTGGCGGTAAG 320 28 100.0 33 ............................ ATCAAGGGGGGCGCAAACGTAGCAACCAAAAAC 259 28 100.0 32 ............................ TTGAACGTGTGCATCAGACTCCAGCCACAATT 199 28 100.0 32 ............................ ACAAGAGGAATACAAAAAAGAAACGCTGACAT 139 28 100.0 32 ............................ CGCTAGACCAGTCCAAACCAGTCGAAGTAGAA 79 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 6 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TGCGATTGCTGCCCACGGCGCTGGAGGGCGGCCAGAACTACACGGTGTAGCACCAGATGGATCATCACAGAGATCAATAATATTAGCCCAATCACCATCGTCAATGACATCACATCGGAGAACTCCATCCCCAATCTTTCCAGCCACTGGCTTATTCTTTGTTGCATCACTGCTCCTATAAAGCATCAATCAAAAGGCCTTAGCCTAAAGGCTATAGGCGCAGGGGGTGCACCTGTTTACCCTTTTTTACATTGTGGTTCTGTATCTTTGTTCGATTGTTGCCCAGCGAGGGGAGAGACATATTTATAGGCTGTGGTTTATGACATGGTTTGTGGAATTGTACTGTGGTTTTATTATGAGTGATGTTCTGACCCTATTTTTTTAGCTACTGCTAACTTATTGATTTTACATTGTGGTTATCGGTGGTCTAAAAAAAGGGTTTTTTCCCCATTAGCGAAATAATTATTTTACAAACAGGATGTTATCCGTATTATCTTACT # Right flank : ACTATGTTTTTTCTCTTGAATCCGTAAAATCAGGTTCACTGCCGCACAGGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 30-478 **** Predicted by CRISPRDetect 2.4 *** >NZ_CBLG010000105.1 Yersinia wautersii strain WP-930601, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 30 28 100.0 32 ............................ GTAAGCCCTCCAAGTTACAGATACCTCATCAA 90 28 100.0 32 ............................ CCGGCTCGGCGGTGGGTAGTAGTCTTAATAAC 150 28 100.0 32 ............................ GTATTGACGATGAGGGGAAAGAGATTCAGGAA 210 28 100.0 32 ............................ AGAAGCCTCAGCAGACCCCGCAAGGGGGTAAG 270 28 100.0 32 ............................ TCTCATCACCCACACCCTCCCGGCAATCCTTC 330 28 100.0 33 ............................ TAGAGGGCTATGCGACCTCTGTAGTTGATTCCA 391 28 100.0 32 ............................ CAACAAAATGACCGTTCGAGTAGACCAGGAAT 451 28 92.9 0 ........................T.G. | ========== ====== ====== ====== ============================ ================================= ================== 8 28 99.1 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GGCGCAGAATGCCCACAGACAGCCTCAGCG # Right flank : AGGGTCACTGTCTGTGCGCCAGCGCGGCCCCGGCCTGCGCCTCCTGCAAGTAGGCCAACGCCACGACCAGAGACTGTACCAGGCAGAGCGTGGCTGATTGAGATCGGAAGGCATCTACCTGAGCCTCTTTCACCACAAAACAGAGATCGCTGAACGTGGCGAGTGGGCTTATCTGGCTGTCGGTAATGACAATCTGCCGGGCACCCGCGCTAGCGGCTATTTCACTGACCATCACGGTCTCTTCGGCGTACGGAGAGAAACTGATAGAAACCACGATATCGCGTGCTTTAATGCTGTTCACCTGCTCGCGCAACATACCCCCGAGGCCATGAAGTTGCACTGGGCGACATTCCAAATGGCTGAGTGCGTAGGTCAGATAGGCGGCCACGCTGAACGAGCGGCGCAGGCCCACCACATAAATGGTATCGGCCTGAGCAAGCAGTTCCACCGCACGTTGCAGCATCTCTGGTTCAGTACGTGCCGCCAACTGCTGCAGTGCC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [16.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 290-23 **** Predicted by CRISPRDetect 2.4 *** >NZ_CBLG010000271.1 Yersinia wautersii strain WP-930601, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 289 28 92.9 32 TC.......................... CTATGTTTTTTCTCTTGAATCCGTAAAATCAG 229 28 100.0 32 ............................ GATGCAATTAACGCCGTTACAGTTAAAGCCAA 169 28 100.0 31 ............................ TGATCTCCCCATCACGAAAGTTAGGGTTACG 110 28 100.0 32 ............................ TGGTTCTTTTCTGCTGGCAAAACTATCTGTTT 50 28 96.4 0 ..............C............. | ========== ====== ====== ====== ============================ ================================ ================== 5 28 97.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GCTCTTCCG # Right flank : ATTACGCCGAAATGGTTGTGCGC # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [16.7-6.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1-328 **** Predicted by CRISPRDetect 2.4 *** >NZ_CBLG010000300.1 Yersinia wautersii strain WP-930601, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1 26 82.1 32 --G.T..T.................... AAACCAGTAAGCGGCTTCGATAATCTCTACCA G [8] 60 28 100.0 32 ............................ GGAGTCTCCCAGCCCTGCTGTGATTGCCCTGC 120 28 100.0 32 ............................ GTAAAATCCAAGGCCCCGGCGTACCTTTAAAT 180 28 100.0 32 ............................ CACTACTGGTGCGGGCTGCGCGAAGGGAAGTT 240 28 100.0 33 ............................ GTGATGGCGAAGAGCAAGAACCCACCGGTGAAA 301 28 85.7 0 ....................A.CG...G | ========== ====== ====== ====== ============================ ================================= ================== 6 28 94.6 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : | # Right flank : AGC # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-1.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.41 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 65106-64237 **** Predicted by CRISPRDetect 2.4 *** >NZ_CBLG010000163.1 Yersinia wautersii strain WP-930601, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 65105 28 96.4 33 .............A.............. GTGATGGCGAAGAGCAAGAACCCACCGGTGAAA 65044 28 100.0 32 ............................ ACACTGAAAATAGTCACCAAGGTCATCACTAA 64984 28 96.4 32 C........................... CGAACATGACCAACGGCGAGAAACAGCAACTG 64924 28 100.0 32 ............................ AGCGCAGTGAAAACAACTTGAAAGGCGTTAAC 64864 28 100.0 32 ............................ ACAATGGGATATTAACGCCGGTCGTGAGACAT 64804 28 100.0 32 ............................ AAAAACGGTGAAGGATTGCTATTTGAATATGG 64744 28 100.0 32 ............................ AGCAACTGAATAAGGAGTGTTAGAGACATTAT 64684 28 100.0 32 ............................ TGTACGAACATCTGTAATAAATAGGAAACCAA 64624 28 100.0 32 ............................ TTGTGCGGATGAAGGGCCAGCGGGGTGTTAAA 64564 28 100.0 32 ............................ CGGGTGAAAAGTCGGTACCTGCGAATCGGCAG 64504 28 96.4 32 ...........T................ TATACACGCTGTGCTCTTTATACTGAAGTTAT 64444 28 96.4 32 ...........T................ CATGCGCCGCACGTTACCGTTAACGTCGATGC 64384 28 100.0 32 ............................ TGACATCATTCTCAGCCAAGTGGCCAATCACG 64324 28 96.4 32 ...........A................ ACTTTAATTTGCAGATCTGCAAAAAGGGGACG 64264 27 85.7 0 ...................A-.A.T... | C [64240] ========== ====== ====== ====== ============================ ================================= ================== 15 28 97.8 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : AAATCCAAGGCCCCGGCGTACCTTTTAA # Right flank : TTCTGGGCCATGCGCTGATGCTATTTGGGGATCAAAATTGCGAGCGGAAGCGCATTTTGTAACAGACAACAGGGAGAATGGCATCTTTTATTACTGACTTTGCGAGTATTAGAGTAGGGTAAATAGCAGGTGGCATATCAATATATACCCGTCATACTTCAAATTGCATGTATGTTGGCTGCGCTCAATTATCCCAGTCACTTACTGGTGTAAGCGCTTGGGGATTGACTCCACTACTGGCTTCCTGCAACTCGAATTACTTTGGGTATAGAGAGAGTTATTTTCTGGAATAATATCTGCTAATAAAGCGCTAACGGAAAAATAGCGCGGTGGATATCCCGCTAAGGAGTTTTTTGGCTATGGAAAACGTTATTCATTCCTCTGATTTGAAAACGATCCTGCATTCAAAACGATCCAATATTTACTATTTAGAATATTGTCGTGTATTGGTTAATGGTGGGCGAGTTGAATATGTCACCGATGAAGGTAAACAATCCCTT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 500-53 **** Predicted by CRISPRDetect 2.4 *** >NZ_CBLG010000313.1 Yersinia wautersii strain WP-930601, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 499 27 78.6 32 C...-.GAT.T................. GTTCTTTCATTACCGCCACGCCGTGGCATTAC 440 28 100.0 32 ............................ TTGTGTTTAGCCCACAGCAAAGCACCGACAGT 380 28 100.0 32 ............................ ACGTTCCAAATCCTTGGCCGCCATCAGCCCGG 320 28 100.0 32 ............................ GGTAAATTTATAGACCCTAAGCAAAACTATGT 260 28 96.4 32 ............G............... TGGACGAACTGAGGGTGATTATGTTGTCGTCG 200 28 100.0 32 ............................ TGTGTAGCCACCTTGCGCGGCACGAATCAAAC 140 28 100.0 32 ............................ GTTGAGGAGCTGAAAGGTATTCGTGATTACTA 80 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 8 28 96.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GC # Right flank : AAGACATCAGTGCCGGACATATTTGAGTTTATACGTTCACTGCCGCACAGGCA # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 490-40 **** Predicted by CRISPRDetect 2.4 *** >NZ_CBLG010000046.1 Yersinia wautersii strain WP-930601, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 489 28 100.0 32 ............................ AGAAGCGCGAATTAGTAGTCACGGCAGCATTG 429 28 100.0 32 ............................ GTTGCACATTGAAGATTGAGCAATATGAGGAG 369 28 100.0 32 ............................ AATTGAATACCTCTCTCAAATGCCTGCTCTTC 309 28 100.0 33 ............................ AAACTTGATTTCATCGAATTACTTATTAATGAA 248 28 100.0 32 ............................ AATGCCGAAAATGCGAGCAGCAAATATATGAC 188 28 100.0 32 ............................ ATGGTGACCCAGACAGCGAATTAGTCGCCCGA 128 28 100.0 33 ............................ GCTGATCCCCATAAAAAATATTTGCTGATAAAA 67 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 8 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : AATTTGCGCCCAGAGATGTTTCAATT # Right flank : AGTTCTTTCATTACCGCCACGCCGTGGCATTACGTTCACT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [31.7-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 455-7 **** Predicted by CRISPRDetect 2.4 *** >NZ_CBLG010000047.1 Yersinia wautersii strain WP-930601, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 454 28 100.0 32 ............................ GCTTGAGAGCCGGAAGCATTGAATACACGACT 394 28 100.0 32 ............................ AACACAACGCCTAGCGCTTGGGCTATTCTCAT 334 28 100.0 32 ............................ CGTAAGTCTGGTTCTGAAATCATTGTCACATT 274 28 100.0 32 ............................ TTACGGCGAAATGGTTGTGGGCAGTAATGTTA 214 28 100.0 32 ............................ CAACTGGAAGCGGCACAGAAAGAGTTATCAGC 154 28 100.0 32 ............................ AGACGGCGGCGGCGTAATGCTCACCGAGACTT 94 28 100.0 32 ............................ GCAACAATTTGCGCCCAGAGATGTTTCAATTC 34 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 8 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CCGGCCTTGTTGGCACAACGATGCTACTGGCAGCATTTTGCTACGGTGATAGCGCATGCTTTTGCGCTTAACCCGCAACTTAAATCGTTGGCAACTGCAGAGACACTATTGTGCCGTTGCGAGGATGTGGCTTTAGGGCAGATTGTCGGGCAACGGGATTGGGTGGCCGCCAAGCTGGCTAGCCGCTGTGGCATGGGGGCTTGTCAGGGGAAAGTCTGCGCCACCGCTGCCCGTTATCTGTTTGGCTGGCCGTTGCCAACCCCCAGAGTGCCATTGACGCCTGTCAGGCTAGAAACATTGGCGGCGACTCCGCCGTTCTCCTCAGAAAAATAATCATTAGGATCCGGTTACATCCCCACAGGTTCTTGTGACCCTCTTTTTTTCACTATTACTAACTTATTGATTTTTATACTGCTCAGGTGTTTCACTAAAAAAAGGGTTTTTACGCATTTTGCGCAATTGCTAATTGATAAACATCAGGTTATCCGTATTATCTTACT # Right flank : AAGAAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [5.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //