Array 1 26686-30909 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV786101.1 Brevibacterium sp. HMSC24B04 Scaffold266, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 26686 29 100.0 32 ............................. GCGGCAGCTGCCAAGATCGTCGAAGAGTACGC 26747 29 100.0 32 ............................. TGGAGCGCACCAGACGCCAGGCTCGAGCTGCC 26808 29 100.0 32 ............................. CAGGCGACCGGACGACTGAATTCCCGTGTGCG 26869 29 100.0 32 ............................. CCACGAGCTCGCCATCTCAGGATTTGACCTTG 26930 29 100.0 32 ............................. GAACTGCGTGACGTGGATGCCCCAGTGCTCAT 26991 29 100.0 32 ............................. TCCGGGTCAACGTGCGTGTCATATGCGGTGCG 27052 29 100.0 32 ............................. TATACCACCACTTTGGATGTATTGCAAGTTGT 27113 29 96.6 31 ............................T ACCCCGTCGTGGATGAGGACACCCGTCAGCG 27173 29 100.0 32 ............................. CGTCCTCTTCTTCACGCTCCAGCAGGGCGAGT 27234 29 100.0 32 ............................. GTGAACGGCATCGTGGTACCGGAGTTGGTCAG 27295 29 100.0 32 ............................. GGTGTCACCGACAAGCCGGAGCAGGGCGAGCA 27356 29 100.0 32 ............................. ACTGAACACTCGGAGGAACCCGCCGAGTCTCC 27417 29 100.0 32 ............................. GGCACCGTCTACGTATCGGTCATTGACTTCAA 27478 29 100.0 23 ............................. NNNNNNNNNNNNNNNNNNNNGAG Deletion [27530] 27530 29 100.0 32 ............................. TGGGCTACTCGGTGAAGAACATCATCTTCGGG 27591 29 100.0 32 ............................. CAGCACGGAACACCAAAGGCGACGACTTTTCA 27652 29 100.0 32 ............................. TGGGTTCTCGGGTCAGGCTTGCTCTCCGGATA 27713 29 100.0 32 ............................. CACGACGCTAGCAAGGTTGGGGTGGCGATGAG 27774 29 100.0 32 ............................. GGCGGCGGACGCATACCTGGCTGGTGACATTG 27835 29 100.0 32 ............................. AGCTGCCTGAATGTTCGCGAACACCGGCTTGA 27896 29 100.0 28 ............................. CACGNNNNNNNNNNNNNNNNNNNNTGAG 27953 29 100.0 32 ............................. GCTATCGACATCACCGCGTCGGGGATTGATAC 28014 29 100.0 32 ............................. CGCCGCCTCAACATCAGGATGAATCACAGTCG 28075 29 100.0 32 ............................. GACGAGCTAGGAGACGCAGCATGACCAAGAAG 28136 29 100.0 32 ............................. ACGTCGGTAATGGGCCGATTGCCGACAGCGGC 28197 29 100.0 32 ............................. GGCTGGTCGAGCTGGGCGGTGGTGCCCGCACG 28258 29 100.0 32 ............................. TAATAGACGAAGCACAAAGCGAGTAAAGGAGG 28319 29 100.0 32 ............................. GCGCCAGGGGCATCGGACGCGACGGCTGGGAG 28380 29 100.0 32 ............................. TTCGGAGCTATGCGTCAGACGGGCATCACTGA 28441 29 100.0 32 ............................. ATTCCTGACCCCGGAAACGGCGAGTCAGCACA 28502 29 100.0 32 ............................. GGCAGGAACTTCTCTTCGGACAGGCCAGCACC 28563 29 100.0 32 ............................. CGGTATCACTTGAACCTCGCCAACATTGCCGC 28624 29 96.6 32 ............................T GGGGGCCTTCTCGTATACGGTGGCTGCTCGAC 28685 29 100.0 32 ............................. AGGACACGCTCGACACGTACGCGCAGGGTATG 28746 29 100.0 32 ............................. GCGAGAAGCGGCTGCGCGTCGACGGCGCCGTT 28807 29 100.0 32 ............................. CGCACACCGCTCACGTGCACATCTCGATCTAC 28868 29 100.0 32 ............................. ACGACAGAAATTAGCTGGGAACTGCTCGGCAA 28929 29 100.0 32 ............................. GAGGGCAAAACCAGCGCGGACGAACTCACACA 28990 29 100.0 32 ............................. GCCCTCTGCACTTTCTGCATTTGGGCGTTTCC 29051 29 100.0 32 ............................. GAATGTTCCACACATTCGTGAACAGCCGTATG 29112 29 100.0 32 ............................. CGCATCAAGCGCGGGCAGGCTAAGCAGATGAA 29173 29 100.0 32 ............................. AAAGACCTGCGTGCCCAACTTGCAGAACTTCG 29234 29 100.0 32 ............................. CTGTTGAATTTGTTGTCAACACGGTGATTCAA 29295 29 100.0 32 ............................. CGTTCTCGGAATTGACAAACGTATTCGTCCCA 29356 29 96.6 32 ............................G TATGTGGATTTGGCTGTGGATGATGGCTGGCT 29417 29 100.0 32 ............................. TGCATCAGCATCACCACCGGAAGGAACTCCAA 29478 29 100.0 32 ............................. TCAAATGAAACAGTGTCCGACTTCTTGGCCTT 29539 29 100.0 32 ............................. GTTGGTCTGGCCATTGTGGCGGCTGGTGGTGA 29600 29 100.0 32 ............................. CGTTTGATCGCCTCAACACCAGTACGGAACGC 29661 29 100.0 32 ............................. CAGAAAACCTCAACCTTATCGCCCATTGTGAA 29722 29 100.0 32 ............................. AGGATGCGACTGTAGGTTATTTCACCGTCACG 29783 29 100.0 32 ............................. GCACACAGGGGAGAAAACTCCACATGCGCATT 29844 29 100.0 32 ............................. CGGCCCAGCACGGCTATGCTCCCCGCGACGAT 29905 29 100.0 32 ............................. ATGGCAGCCCGCCGCGGCGACATGGGCACCGT 29966 29 100.0 32 ............................. TCAAGGAGCTGGAAGCACAGCCGACCAGCCCA 30027 29 100.0 32 ............................. AATAGCGCTCGTTTCAATGAAGGTGAGACGCC 30088 29 100.0 32 ............................. GGGGTTGCCCGTTACGACATTCCTAAGGCAAT 30149 29 100.0 32 ............................. AGCCTGGTCGCCGATGTTGACGGTGGGGTCGA 30210 29 100.0 32 ............................. GACGACCCACCTACGTCTTTACCGGGAACATC 30271 29 100.0 32 ............................. AAGATCGCCGAAACGTTCAAAGTCAAAAAGAT 30332 29 100.0 32 ............................. CGGGGCTGGTGCCAGGGATTTTGATTACGGTG 30393 29 100.0 32 ............................. AGTTTTCAGAGTATGTTCTAGTTCCTTGCCTG 30454 29 100.0 32 ............................. CATGCCCAACAGGACATCCCGCACATCATCCA 30515 29 100.0 32 ............................. GACGGTGGTCAGTCCCCACAGCGGCGGGAACA 30576 29 100.0 32 ............................. TAATCGAGACGACGCGGCCAGACGGCTGTTTG 30637 29 100.0 32 ............................. GTGAAGTATTTGCCGGTCGCCGTCAGGTACGG 30698 29 100.0 32 ............................. CAGCACCGCTGCGCCCATCAATCACGATCGAG 30759 29 100.0 32 ............................. TGCTGGTTCGACCTACCGGACGCGGCTACCGC 30820 29 89.7 32 .............CC.............G GATTGTCGGTCTACTGGCAGAGACGCTCGGCT 30881 29 75.9 0 ...C.........GA..A.....A.A..G | ========== ====== ====== ====== ============================= ================================ ================== 70 29 99.4 32 GTGTTCCCCACGCAGGTGGGGATGAGCCC # Left flank : ATCTCGATGAATTGTCAGTATGGGCTGGCCGGGGCGAACGACGGCTTTCCAGCGGCCTCAATCATGCAGATCACGGATCATGGTCATCGTAGTCTTGTCGAGCTGCCCCGCTGGCCTACGGGGAGACATCACCAAGTGGCTTGTCGAAATCTCTGCGGGCGTGTTCGTTGGAAAGCTCAGTGCCCGTCTCAGGGAGTTGCTTTGGGAACGCATTGATGCAACATCATCTACAGGTCAGGCCCTGATGATCTGGTCAGCCAACAACGAACAAGCCCTTGACTATCGGGTCAAGGAGCACAAGTGGGAACCCGTTGACCTTGACGGCATCACATTGATGAGAAGACCAGCAGCACAGTCTGGATACGGAAATACAACCCTAAAAGCAGGCTGGAGCAAAGCAAGAGCTATGAGGAACGCACATAAATTCGGAAACAAGCGGAAAAGCCCTTAAAGTGATCTAAAACTAGCTTGCAAGCCAGTGTTTGCACTGGTCAGCAAGA # Right flank : GCGCGCAGAAAGTACTTTGCCGTACAAAACAGTGGGCGCTGTGCCTCAGCACAGCGCCCACTGTCATTCACACCAGCTCAGTCATTCAGCCAAGCGTTGGCGAATACGGCTCGCGACACCTCGGGAGCTGGCGGATGGAAGATGCCCGCGGCAGCATCCCGGTACAGCCGCGATGCTTCAGCAGCGTTTCCGAAGCCCGCACCTCCCGCACAGTGCAGAGCCGCCTCGGCGTTCGCCCTGGCAGCTTTCTGTGCCATGTACTTAGCCGAGACAAAGCGCTGCGCCCACGCGGGACCGTAGTCCACACACTCATCGAAATCACGCGTGTAGGAATCCAACTGGGCCGGCACTGCAGCAAACTCCAGAGCGGCATCGGCAACACGCACGCGGAACTCACCGATCTCCGTATACGGCGCTCCCCCGTTCTTAGCCGAACGGCGCTTGCGCAGAGCCTCCGAAGCGACCTCAAGAGCACGGCGAGCAAGACCCGCGTACACCGA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGCAGGTGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGCAGGTGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.10,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //