Array 1 26198-27037 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZNR01000031.1 Actinoplanes regularis strain DSM 43151, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 26198 36 100.0 38 .................................... TCGTGCACATGGCGGCGCGGACCGGACGCCTGTTCGGC 26272 36 100.0 36 .................................... CGCACAAGGCCCCGAACTACTGCATCCAGGGCACCG 26344 36 100.0 33 .................................... TACCGCGACGGCGACACCTGGCGCGGCACCCTC 26413 36 100.0 40 .................................... GGACGCCGCGATGGCCCAGATGGTCCAAAGCGGCCAGGGC 26489 36 100.0 38 .................................... TACGGCCAGAAGCGCGTCGTGGCGTTGTACGCGGACAT 26563 36 100.0 34 .................................... ACGTCCGAGACCATCGCCGCACTTCCGCTGTCGG 26633 36 100.0 37 .................................... ATCCGCAGCGCGGTGTAGGACTTCCCGGCGATCTTCA 26706 36 100.0 39 .................................... CGCACCGACCCGGAAGCTCGGAGCCGGTCCCGGGCCCGG 26781 36 100.0 38 .................................... CAGATGTTCATCTCCGCGCTGGAGATCGACGAGGCCAA 26855 35 97.2 37 ....................-............... AGGTCATCCTGTGCAGCACCCACCGCAGCCGACGCAG 26927 36 94.4 39 ........A..................G........ TCGAGCCCTGCCGAGGCGAGGGCGGCGAGCACGGTCGCA 27002 36 94.4 0 ............................T......T | ========== ====== ====== ====== ==================================== ======================================== ================== 12 36 98.8 37 CTCTTCCCGGTCGCCAAGACCGGGCTCCGTAGCGGC # Left flank : CAGACAAGGGCTACAGCAGCGAGGCCTTCCGTCAGGCCTGCCGCGAGCGCGGCACCGAACCGATCATCCCCAAACCCAAGACACCCGGTATCAAAGGCCTGGGCAGTCTGCGCTACGTCGTCGAGCAGACCTTCGCCCTGCTTCATCAGTTCCGCCGCCTGGCCGTGCGCTGGGAACGCCGCCTCGACATCCACGACGGCCTCGTCAGCCTCGCCTGCGTCATGATCTGCTGGCGCCGGTTGATCAAATGGACCGCATAGAGATCGCGTTAGGAGCTTTACGTCGGCAAGGCGAGCGCGGCTCCTCCAGCCCCCGGAGTGAAAGAAGTCTGATGCGAGCGCTCAAATCCGACGTTCTTTCCGGGGGAGCGCTCGCGCCCATGTCAGGCAGGGTTTTAGGCGCACCTCCATCTAGATGCCTGGATTAGATGCTGATAGTTGGGTGGAGTTCTCGCGAGATCATGCATAACAGCAGCTCAAGTGCTGTGAATTTAGCGAGCC # Right flank : TATGGGCAGCAGCGCTGGTCACATTTCTGGTTAGATGCGTTCCCGGTCATCGCGATCGGGCTCCGTGGTTGTCTAGATCGCGATTGCCTCGTCTTGCGTGCGCCCTGATGTGATGTTGAGCGGAAGCCTTTCATGGGCAGTAGCGCTGACACCAGCAATGGTGTTCTACCTCTTCTAGGTGATTCTGGCTCGGCTCGTGGTACCGGCGAGCAGCCCGCGGCTAGCCGTAATGATCTAGATATTCTTCCTGCGTGAGGTCGCAGTGCCGCCCGACTTAGATAAATGATCTTAAATCAGATAGATCATGTCGTGGTGGATGGCGGAAAAATTTGTCGGTGGTAGGCGCGATAGTGGCCGGGTCATATCCAAATTCTCCGCTGGAGGGTTGCTCGGTGGGCGTGGAGAGTGTGTTCGAGGACGTCTTGTCGGCTGTGACATTGGCTGGCGATCGTGCTGTGTGGCGGGTGGTGTCGACTTATCAACCGGCGGGTGGGGAAGGT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCGGTCGCCAAGACCGGGCTCCGTAGCGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-14.00,-13.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 39280-36134 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZNR01000031.1 Actinoplanes regularis strain DSM 43151, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 39279 36 91.7 41 .....C.............G..A............. GCACGGGCACGGGCCTCGGTGGTGGTACCGCGAGCGGACTT 39202 36 91.7 35 ....T..................C......A..... CTCGGCTCCATCGAGCACCGGGCCGACGACGCAAG 39131 36 97.2 37 ..................A................. AGGCCCTCAACCAGTCCGGCCTGGTGGCGATCCAGTT 39058 36 94.4 35 .....................CT............. ACGCTGGCCGCGATCAAGGACGAGAACGTCCACAT 38987 36 97.2 34 ........A........................... TCGCCTGGTTCGGTGCGATGCACACCCAGATCTA 38917 36 100.0 37 .................................... TGCCGCGCTGACGCCCGGGAAGCCGAGGAGACCGCAT 38844 36 97.2 36 ......................A............. CACTGACCTCGCCACGTGGGCTCCTGCTCGGGGCAC 38772 36 97.2 38 ..........T......................... ACGGGCAGCGATGCGACTCGGTGGTGGCTGGACACGCC 38698 36 100.0 37 .................................... TTGGGTGTTCCTCTTTACGGTCGCCCTTGATGGTCGT 38625 35 97.2 35 ...................-................ CCGGGCAATCACGACCAGGCCGTGAGGATCGCGGG 38555 36 97.2 37 .........C.......................... TGGTCGGACCGGATGGTCAGGGCCTCGGCCGATACGG 38482 36 100.0 37 .................................... CCGTGACCCCGACGGAGTTCCGCCTCACGATCCTGCG 38409 36 100.0 34 .................................... TCGGCTCGATGTTCAACGCTGACAAGCTGACCTT 38339 36 100.0 34 .................................... GCGGCTACCGCAAGGTCGCCGGCGCGGTGAAGCG 38269 36 100.0 36 .................................... GGGCCAGCGTGTTGTACGGCCGTGGGATCTCACCAG 38197 36 100.0 35 .................................... CGGTGGCCGAAGGCGTTGTGGCGCGCTCGGTTGCT 38126 36 100.0 37 .................................... GCGAACAGGTCAAGTACTGGCGCCGTAAGCGCGGCCT 38053 36 100.0 35 .................................... CCGACGCGCACGAGTAGGTCGATCGCCTGGAGGTT 37982 36 100.0 37 .................................... CCAGCTCGGCGCCGTAGTAGTACTCGTCGCCGTGCTG 37909 36 100.0 36 .................................... GATCCAGGGCATCGCCAAGCGGGAGCTGGCGGCGTA 37837 36 100.0 37 .................................... CACCACAAGACGCGGGAGGTGACCATGGCCTGGCCCG 37764 36 100.0 38 .................................... GTCGGCAAGACCTGCTCGAGGTGCTTGGTCCTGGCCGG 37690 36 100.0 36 .................................... CTTCCAGTTCTCGGACAGGCCCATCGTGCCGAGCTT 37618 36 100.0 35 .................................... TCGTCGGAGGACGTGACCGTCTGGAGTTACACGGT 37547 36 100.0 36 .................................... GCGAACATAGGTACGGACCTGGTCGCCGCAAAGCCC 37475 36 100.0 36 .................................... GCTGGACGCTGAAGGAGACGACGTGACTGCGATCGC 37403 36 100.0 38 .................................... GCGCGGGCGTTGCGAGCGGCGTAGTAGGTGATCTGCGA 37329 36 100.0 35 .................................... TTGCGATTCGCTGCCTGACGCGCACGCATGGCCTC 37258 36 100.0 34 .................................... AGGAGCGGACCACCTGGCAGAACCGGGAGTCGCA 37188 36 100.0 41 .................................... GCCCGGTGGTCTTCGGTTTTGATACTGGCGAGCCGGACACC 37111 36 100.0 41 .................................... GCCCGGTGGTCTTCGGTTTTGATACTGGCGAGCCGGACACC 37034 36 100.0 41 .................................... GCCCGGTGGTCTTCGGTTTTGATACTGGCGAGCCGGACACC 36957 36 100.0 35 .................................... GTGTTGTCGACCAGCGCGGCGTGCCGGATGCCGTC 36886 36 100.0 34 .................................... TCGAGACGCTGCCGGACCTCACGGCCCAGCTCCT 36816 36 100.0 36 .................................... CGGCCGCGGCGGAGCGGCGGGAATGCCACCGGCGAT 36744 36 100.0 35 .................................... GCGGTCGTCGTCGCGGCCTGGCCACAGCTGACCGG 36673 36 100.0 32 .................................... CTCCCCAGTGCGGGGGTGGACACGCGAAGGAT 36605 36 100.0 37 .................................... GCAGCGGTCCTCGGCCTGGGTCGCCTCGACCAAGCTC 36532 36 100.0 38 .................................... CCGCGTGGAGCCAGGGGAGCGGCTGTGGTGGGAGCGGC 36458 36 100.0 35 .................................... ATCTTGTCTTTGGCGCCGCTGGCGAGGCTCGCGCC 36387 36 100.0 37 .................................... GACCGACGAGGCCCAGGAGGCCGAGACCGGCGCAGAG 36314 36 100.0 37 .................................... CGGTCTCAGGAAGCGCGGCCTCGGCGAGCATGGACTT 36241 36 100.0 36 .................................... AGTTCTGGGAGTCGATGCGCCGGTCTACGTCCCGAC 36169 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 44 36 99.1 36 GCCGCTACGGAGCCCGGTCACGGTGACCGGGAACGG # Left flank : ACGTTGACGAGGACAGCCTGCCGTGCGACGACGCCACGGATGGCGGCCCCGCCGGCCGCATCTTTGCTGAGAAGCGTTACCTCATCGTCCCGCCCGGCACCGGTGCGTGGCCGACTGAGCAGATCATTCCGACACTGGTCACCTTCTGGCAGCAGAAGGGCTACAAGGTCCACACGGACAAGCGCAGCGAACCGGAGCCGCGCTACAGCGTCGAGACGCCCGACGGCTACTTCGTGACCGCCAATGCCTGGAGCCGCGGCGACCACCTCGACATCACGCTCAGCAGCGACTCCCCCTGCATCTGGGAAAACGGCACCCCGGACCCGCAATAGTCTTCCTTCGCCAGCCAACAAGTCGAGCCCGATATCAACATCATCAAAGGCGGGCCCCGGACAGTCACCGTCGGACCCCCATGAACGGAGCATCACAGTCCACCTTCACCCCCGAGCCTGCCGCGGTGACCGAAAAAGCCAAACAGCATCAGTTGCGGGGTGGCGCCA # Right flank : GGCTCGCTTGGATCATGGGTCTTGAACTGCTGCTTTGCGCGCGCTCGCGAGGGCTACGTCGGAGAACCTCCCTTTGATTCAGGTATTTGGATGTGATTTGGGCCTGGGTGCGGTGTGACCTGGGCGCGAGCGCTGCCCAGGGATTGGGGTGGGACTGGAGCGCTCGCATCAGATGATTCTTGTCGCCTGTGATGGCAGCGGACGTTTCTTGCCAATGAAGGTGAAGCGGGCGGCGTCCGTCTCGCCGAGGTCGACGATCACGATGGAGTCTTCGTTGAGTTTCATGTGCCGTTCGACTTCGGCACGGGCGTAGACAAGCTCTGTACGGCTGAGGTCGCAGATGAACACGGAGTATTGGAGGCGTTCGCCGTAGGACTCCATGGTCTTGCAGACTTGCCGGAGTCGCTGGGGTTCACAGATGTCGTAGGCAATGAGGAATCGTCGTCGGGCCATGGGTCACCTTGTGGTGAAGGGGGTGTAGGCGGGCAGTTCTCCGGTGA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGCTACGGAGCCCGGTCACGGTGACCGGGAACGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-13.60,-14.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-28] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA // Array 1 57666-60613 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZNR01000032.1 Actinoplanes regularis strain DSM 43151, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== =========================================== ================== 57666 34 100.0 43 .................................. AGCGCTGCGTCGTTGCGCTGGTCAGCCTCGGCGGCTTCCCGGC 57742 34 100.0 39 .................................. GTACGGCTCAAGAGCCAGGCGTCGCACCTGCTGTCCGGC 57814 34 100.0 36 .................................. TGGGATGCCGTTGACGGTGGCGACCCATCCGGCGGG 57884 34 100.0 36 .................................. CTGGAGGAAGTTGACCCGCTTGGCGACCTGGCGGGG 57954 34 100.0 42 .................................. ACCGACGACCCGGCAGCCGGCACGCACTATCCGCTCCGGGGG 58030 34 100.0 39 .................................. ATCGGCCTTGTGGCGGAGGAGGTCGACGCGCTCGGCGGC 58102 34 100.0 39 .................................. GACACCGCCCGCGGGCTGGTCGTCGAGGTGTACGCCGGC 58174 34 100.0 38 .................................. GTCCTCGGCCGGTCCGCGTCCCGGGGCGTGTACGAGGG 58246 34 100.0 41 .................................. ATGGCGACCATGCGCCGGGTCACCGAGTCGCCGAGGATGGC 58320 34 100.0 36 .................................. TTCTCCCCACCCCGGTGGATCAGCGAGCCGATCGGG 58390 34 100.0 43 .................................. ACGATGTTGCAGCTGCATGCGGGTATGTCCGCGACGGCGCGGC 58466 34 100.0 41 .................................. TGGGTGCGCGTGTTGAATAGATTCGCGCGATGATCACTGGG 58541 34 100.0 40 .................................. ACGTGCCGCTGCCCGCCGCTCCGCGTGGTGGTCCACCGGC 58614 34 100.0 38 .................................. CTGAAGAAGCCGTCCGATGAGGCGGATGGGTTCGCGGC 58685 34 100.0 38 .................................. GAGGCCGAACGCGCGCCGGATGACCCGTGGGCTTACGT 58757 34 100.0 37 .................................. ATCTGGATCATCGCCGGTGAGGACCAAGCCTCCGCGT 58828 34 100.0 38 .................................. ACCGACCAGTGCTGTCCCGCGCGGGAGCATGAGCAGGT 58900 34 100.0 36 .................................. ACATCGTGCGGGTACACGTCGTCCTGGGCGAGCGGT 58970 34 100.0 39 .................................. GACTTCGACATCCGCAAGGAGGCGCTCGGCCTGGCCGGT 59043 34 100.0 37 .................................. GGGTTGCCGGCGCGGGCGAGGATGTCGGCGACCTGGT 59114 34 100.0 42 .................................. CAGGTGTCAAGGTTGGCCGGGCCACGCTCGAGATGGCCGTGT 59190 34 100.0 35 .................................. ACCGACGCGAACGGCGAGCCGCCCGGGCGGACCGT 59259 34 100.0 40 .................................. TGCCCGTCCCCGGGGTAGGCGCGGGAGTAGATGCCGTTGT 59333 34 100.0 42 .................................. CCCTGGGCCGACGACGACGGGGAGGCCCTGGCCGGCAAGCGT 59409 34 100.0 39 .................................. GACCTGGCGCTGATCCCCCGGATCGAACCGATCCCCGGT 59482 34 100.0 37 .................................. ATGCTCCAGTCGAACGGCCGCGGCAACGGAGCCAGGT 59553 34 100.0 41 .................................. CGGGTGAGCGGCGGCGTGTCGATTGCCGGGCAGACAGATGT 59628 34 100.0 40 .................................. ATCCAGGGCCGAAACATCCGCTGGACGGTGCCCCAGGAGT 59702 34 100.0 36 .................................. TTCGCCTGGTCGACGACCAGGGTCCGCTGCGTGTGT 59772 34 100.0 41 .................................. GACTCCCACGCGAGGCGGCGCGCGGTCTCCTGGTCGTAGGT 59847 34 100.0 37 .................................. CGCGACGGCTCCAAGGGCGTCGAGGAGTGGAAGAAGT 59918 34 100.0 40 .................................. CGCGAGAATCACGCCGGAACGCCGATGGCGACAACCCGGT 59992 34 100.0 39 .................................. ATTCCGCCCTCGTCGCCGCCGAACGATCCGTCCTCGGGT 60065 34 100.0 36 .................................. GAGGGCTGGTGGCAGGTCCCGGACGGGCTACTCAGT 60135 34 100.0 38 .................................. ATGCCGGCGATGCGGCGGGCGCGGTCGAGTGGGGTGGT 60207 34 100.0 39 .................................. AGGCGGCAGTCGCGGACGTCGGCGTGCGGCGGGATCGGT 60280 34 97.1 42 ...........T...................... GCGATACACCGGCCGGCCGCGGTGTCGATCCGGGGCGCGGGT 60356 34 100.0 42 .................................. TCGTCGGATCCGGACGAGATCGCCTACTACATCGGCGACCGT 60432 34 100.0 41 .................................. ACGTTGACGAACACGTTCATCGCGAACGGCAACGACGTGGT 60507 34 100.0 39 .................................. CGGGCGGGGAAGACACGAAGCAGGTGGGCCCACTGGGGT 60580 34 100.0 0 .................................. | ========== ====== ====== ====== ================================== =========================================== ================== 41 34 99.9 39 CGCAGCTCCTCCGGGAGCTGCCCTTCATTGAGGC # Left flank : ATGTAGCCGACGATGTACGTCGTACAAAAGTCGCCAAGAAGCTCGAATCATACGGCGACCGAGTCCAGTACAGCGTTTTCGTCGTGGATATCCGCCCGGCCAAGCTGGTGCGGCTGCGAGCCCAGCTGATCGCCCTCATCGACCAGTCCACCGACTCGGTGCTCTTCGGAAACCTCGGCGCACTTCGTGAAAGCCGGAGCCGATCCCTCGACGTCATCGGACGCAGCCGCCCGGTCACTGGTCACGGCCCGGCGATCCTGTGACCTAACAGGCAGCAGCGTGTGCGCTCATCCGCAATATCGTTCGAGTCGAGTCCACGTGCGAAGGCTCCGTTGTGCCGCCGTTGAGCGCTCACCCTTCGCGCACTTCTGAGCAGGTGTTACGGGCCTCCCGACAGGCGGGTCGAGGGCGCTGCGGCGGGGTGGGGCAGCTGCCGCACAACACCCTTCGCAACAGCGGTGCCGAATCCCAGCTCAGCGTGGGTAATATCGGGCCCCAGG # Right flank : CGCGGTTCGGTTCGGCACGCTGGACCCGGGCGTCACCCTTGTCGAGAAGCCGTTCTCCGAGTCCGACCTGCTGCAGAAGATCCGGCAGGTACTCGACAGCGCCCCGACAACCTGACCGGCGAGGCGTACGTGGGAGATCAGCCCGGAAGACGGGCGCTTCGACTCCGCGGTGGGCGCTATCGTCTCGAAGATCAAGGGCTCGTGGCGGGAGCGGGGACAGTTCCCTGCGGGCGCCTTGTTCGCGAGTTGACCGCCTGAGTGACCGGCCGTCAACCTTGAAGTCCTGCGTCAACCGTCGCTCCTGGTCGGCGATCTGGCATGGCGCGAACCGGTCAAACGCCCTGGTAGCGGGTCGCCGGTGACGGTGGTGGGGTGGTTCGCGTGGTGCAACGTACGGCCCGCTGTCACAGCAGTTCAGCACCGGTTTCCCGGCGCTGAACTGATTGCCTTCCGGGGTCGTGCAGCAGCGGTCAGTGATCTAGAGATTCGCTGAGTTTCTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCAGCTCCTCCGGGAGCTGCCCTTCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 959997-959814 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZNR01000002.1 Actinoplanes regularis strain DSM 43151, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 959996 35 97.2 36 ..............-..................... AGGATCGTCGCGGCCCGGATCGCGTCGTTGCCGAAG 959925 36 100.0 40 .................................... ATCAAAGAGCAGGTCAAGACCGGGCAGACGTTTACGTTCC 959849 36 94.4 0 ....T............A.................. | ========== ====== ====== ====== ==================================== ======================================== ================== 3 36 97.2 38 GTCGCAGCTCCTCCGGGGGCTGCCCTTCATTGAGGC # Left flank : TGCTATGACCCGGGAGTGGCTGGCCGCCCGAGGCGTCACCGGCGTCGTCCGCTTCGAGGTACGGCGTTTCGGTAGCGCCAGCGCCCCGGAACGGCGGGCGGCTCGCGGCACGATCCTGAAGACCGGCCAGTCGTGATGTCCGAGCTGCCCCCCATCAGCCTGGTCGCATATCAGGCATTCTGCCCCCGCTGTGCCTGGGCGGAGGCGATGGGCGAGACGACCGACACCCACCAGGTGGCGGCCGGTATCCCGGCGCACACGCCGGCCGTCAATCCGACGGGTTCGCGTTCCCGGCGGCACCAGGCCGTCGATGTGGTCAGTCACGACCTCGGCGTGATCGGCCGCTGCGACACCGTCGAACTGGACGACGAGGCCATGACAGTGGTCGAGCACAAAGCCACCCCGATCCGTCGGCGTCCCGAGGTCACCCAGCCGATACGAGTCCAGGTCGCGCTCCCAGACGGGACGCTGGCCACATAGGCTCGCGCGCACGACGTGGT # Right flank : GTGACCGGTTCCGCCGACTGGTGTGTCAAGGGGCCCTCCGGCAGATCGCCTGAGGCTCTGTCCGGCTTGAGTTTTGAGCGCTCGATCGGGGGCCAGTTGGCCGTCATCAGTGCTCACGCTGGACTTTGACTGCCGCGTGAGCTGGTCAAACGTCCCGGTAGTGGGTCGCCGAGAACGGTGGTGGGGTGGTTCGCATGGTGCAACGTCCGGCCCACCCAGGTCACGGCGCTGCGGCTGATCTAGTGCTGTGACCACGAACGTTTGAGGTGTTGGGGTCAGGCTGCTCGGGTGGCGGGTTGGCCCCAGCGTCGTTGGCGTTCGCTGCGGATGCGGGCTCGTTCGCGGCGTTGGGCGGCCAGGACGTCGGGGTGGCGGGCGTTGGCGTTGCGCCAGCGCAGGTAGGCGTGCAGTTTCCGGGCCAGGATGGTGTGGTTCGGGTGATTCGAGCCGGCGATCACGAACGTGCGTAAGGGTCCGAACTGCGCTTTGATCGGGTTGGC # Questionable array : NO Score: 2.53 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAGCTCCTCCGGGGGCTGCCCTTCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-10.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //