Array 1 18067-15186 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRUV01000010.1 Bacteroides thetaiotaomicron strain AF24-19LB AF24-19LB.Scaf10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 18066 45 87.2 30 ...A.-...CA....T..-............................ CTTGCCGAAGTCGGAGATACCGTCCAAGCA A [18057] 17990 47 97.9 30 .........................G..................... TATAAAATTCAGCGTGCCAAACAGCACGAT 17913 47 100.0 30 ............................................... ATGACCGATGCACTGGAGAAGGTTTGCAGC 17836 47 100.0 29 ............................................... ATATAACTTCAAAAATCTAATTTACTTAC 17760 47 100.0 30 ............................................... TGTTACATCCGCTATTATCAGTAATATATA 17683 47 100.0 30 ............................................... TTCAATTTACTGATACTACTAATCTCACTA 17606 47 100.0 29 ............................................... AAAATATTATTTTTCTATTTATTTGTCTC 17530 47 100.0 30 ............................................... AAATCATATAAATATAATAAAATATATTAA 17453 47 100.0 29 ............................................... CTCATTCTAACTACTCTTATTCATAAATA 17377 47 100.0 30 ............................................... ATATTTCTATTTAAAAATATATCCATGTTT 17300 47 100.0 29 ............................................... AATAGTATAATTATTAAAATTGTTATTTA 17224 47 100.0 30 ............................................... AATTAGTTGTTCTAAATGTTTTATTCTCTA 17147 47 100.0 29 ............................................... CCTTTTTAGATGAGATATATGTCAAAAGA 17071 47 100.0 30 ............................................... ATAGCTGCAAATGATACAACCAAAAACCTA 16994 47 100.0 29 ............................................... GCATGAAAACGGAGGCTTATTTTAGTCTA 16918 47 100.0 30 ............................................... GGGTTCTCCGGTTAGCTTGGCGGTACGTGA 16841 47 100.0 29 ............................................... GATGCTCCACGAGGATTATCCACCCACCA 16765 47 100.0 29 ............................................... AAGGTTAAGGAAAAACTTATAGAGAATAA 16689 47 100.0 29 ............................................... ACGGGCAACAGTTCGAGGCAGAAGGAGGC 16613 47 100.0 30 ............................................... CTGTTATTTCCGGTACTTTCGTGTGGTCTA 16536 47 100.0 30 ............................................... TGCGCAAAACACTATCGGCACACGAAAATA 16459 47 100.0 30 ............................................... ATGTTCCTCGAATTGATCCTGAATAATCAA 16382 47 100.0 30 ............................................... GCGATCGTGGATATGGGGAACAATCTACCA 16305 47 100.0 29 ............................................... CGCACCATCAAGGAATTGCAGGATGAATA 16229 47 100.0 29 ............................................... CCAACTGCATAAATACCAAGTTCAAGGCG 16153 47 100.0 30 ............................................... TCCTCGTTACGAAGTAACATTGCTCATCCC 16076 47 100.0 30 ............................................... TACATTTTATGCTAAAACATAACGCTGCGT 15999 47 100.0 30 ............................................... TATGAGTAAAAGAGAAGTCATATCCTTTTT 15922 47 100.0 29 ............................................... TGCAGTACACCGAGATGATCTACACCACT 15846 47 100.0 30 ............................................... CCATATGGTATCGCATTCTAGGGAATTATA 15769 47 100.0 30 ............................................... ATACATCTCATCAGAAGAATATTGCCACTG 15692 47 100.0 29 ............................................... GTATTCGGATTTACCTTAAAGAAAGGCCA 15616 47 100.0 30 ............................................... AGTTGCCTGTTCTGGGTACTGATCGCTTCC 15539 47 100.0 29 ............................................... CATGAAGACATTGGAGATTATGAGACTGA 15463 47 100.0 30 ............................................... TGCCGATCAGTGTTGAAAGACAATTGCGCA 15386 47 100.0 30 ............................................... GCGTATGTTACTCGAAAGAAGATGCGGACA 15309 47 100.0 30 ............................................... TGTCGATCAGTATTGAAAGACAATTGAGCA 15232 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 38 47 99.6 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAAC # Left flank : GTTCACAAGTTACATAGGTGGGGATTCCATAGTTGGCGATCTCCTGCATAGCAGCCGCACGTTCTTGAGGTACCAGAGTATTCCGCATTATATCCGGATAAAAACGGTTCGTCTCAATGGTCGTACAAAGAACGGATTTCTTCATAACCGGATGCTCCAGATATTTCAGAAAACGGGCGGGATTCTTTGACTGGAAGAGATACTTGTTATCAAAACCGTCACAATAGTCCAGTATCTGCTCAATCCATTCTGACGGGACATTAGCCGCCCATTCATCCGTACTGCTGCCTACAAAGATAAAGTTGCCTTCACCCAGATTCACTTTCAGTTCCTTCAGCTCCAGACGCAAGGGAGGCAGGAGAAGTTTACGTCTCATAAAACAATATGAACAAGAGTGTTCACATTCGCCTTTCATCGGGTTATATGTATGTGAAACGAAGGCATACATGTTCCCGGTACTTTTATTCAGTGCCATATATCATTATGCTTTTCACATCCAT # Right flank : ATATTTTATATAACAAAATGATTTCCAACAAGTTAAAAAGAAAATTAGAAAAGAAAAAAAGTCTGTTTCCAGCACAAAATCTCGCATTAATGCGAGATTTTGTTTTTTAAAATAACTCTAATTGTTGTCCAGGCGTATTAACATTCTGCATTTTCTTTCCATAAAAAAGTTCTATATTACCAAACTGTTTATCGGTAATACACATGATTCCGACATGTCCAAACTCCGGGAGGAAAGATTTAACTCTTTTTATATGTACTGTAGCATTTTCACTACTAGCACAGTGACGCACATAAATGGAAAATTGAAACATAGTAAAACCATCCTTTTGCAGATTCTTTCTAAAGTCCGCATAAGCCTTCTTTTCTTTCTTCGTCTCAGTCGGCAAATCAAAAAAAACAAGTACCCACATAATACGATATTCACTAAAGCGATCCATTATCGTTCAGGATAAGCTATTCGACGAATTTCTCCATTGAAACATTTGTAAAGTGAGGAAG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.5 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //