Array 1 21926-22556 **** Predicted by CRISPRDetect 2.4 *** >NZ_JWBL01000004.1 Serratia marcescens strain 1145_SMAR 18_51046_864214, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 21926 28 100.0 32 ............................ GCCTGGTGGGCTTCCAGTTCGTCGGCCTCGAT 21986 28 100.0 32 ............................ CAGCTGGGCGGCGAAAACGTAAACATGATGCT 22046 28 100.0 32 ............................ GACGCCATTGCAACCGGCAGCGAACCGCCGTT 22106 28 100.0 32 ............................ ATGATTAAATCCAGATCGCCGGTATAGTCCAA 22166 28 100.0 32 ............................ CGGGCGTGTCGTGTGACCGACGACGCAATCGC 22226 28 92.9 32 CC.......................... AATCTGGATCGGAAATGGCGTCAGCGTGGTAA 22286 28 100.0 32 ............................ TCGGCGTGCCGGGTCTCGATTCCCTTGAGGTT 22346 28 100.0 32 ............................ ATCTGCTGGTATCGCGGGTCGTTTGGCCCTGG 22406 28 100.0 32 ............................ TGAATTTCGGTGGTATCGGTCATGATTTAATC 22466 28 100.0 32 ............................ AATACAACCTGGCGGGCAACTATCACACGGAT 22526 28 96.4 0 ....................A....... | A,A,G [22546,22549,22552] ========== ====== ====== ====== ============================ ================================ ================== 11 28 99.0 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CCGGCCTACTACGGCCGCTTCGGCTTTAAACCGGCCGCCGCCTATGGCCTGCACTGCCGCTGGCCGGACACGGAAAGCGCGTTCCAGGTCTACCCGTTGGCGGAAGACGCCCTGAATGGCGTCAGCGGCGAAGTGGCTTTTTCGGCACCGTTTAATCGCTTCTAGCACTCGGCAACAAATACTCCAACGACAGCGGCGGGTGATTCACCAGCCGCTCTTTTTGTCTTTTGCTCAGCTGGTTGAGCTGACAATCCAGGTCTTCTGTGGTGTCTATGCGTCTGAGAGAAACGGATGGTGATACCGAACAGGGAATCCAATAATTCCCCCCTAAAAATGCAGACACGCCACCTTACTCCGTTCTGGGTTGCCGAACCCTTTTTTGAGCGCCACTTTTAATTGATTGATTTAAAGTCATATTTTTAAACTCTTTAAAAAAGGCTTTTTGAACGGAGATTTCGATTTTCCTCCATCAATCAGCTGATTAGCGCTAATATGCAACG # Right flank : AAAGTAATATGTGTTTGGTACATTCCGGCAGTGATCAATAAGTGGATGATTTTATTTTTCTGATTGATGAATATTGACTCGGTTGCAACGGATTTCCTTGGAAAAACGTGGTAGAACGTTGGTGTCGTCGGCATTGATCTGTATTGCTTGTTATTTATTTTAATTGTAATTATTTCATTATGGATAAGAAATATAACAATGAAAAATACCCTTTCCCCTTCTGAATTAAAAACAATATTGCACTCGAAACGAGCAAATTTGTATTACCTGCAATATTGCCGAGTTTTAGTGAATGGCGGCCGCGTCGAATATGTCACGGACGAAGGAAAGCAGTCTCTTTACTGGAACATCCCTATTGCCAACACTACCGTCATCATGTTGGGAACCGGAACCTCGGTCACGCAGGCTGCAATGCGTGAGTTTGCTCGCGCCGGCGTTTTAGTCGGATTCTGTGGTGGCGGTGGGACACCCCTATTTGCAGCGAACGAAGTGGAAGTCGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 31032-32730 **** Predicted by CRISPRDetect 2.4 *** >NZ_JWBL01000004.1 Serratia marcescens strain 1145_SMAR 18_51046_864214, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 31032 28 100.0 32 ............................ CGGGGTTTCGCGGCAAGTATGCACTGGACGGC 31092 28 100.0 32 ............................ TTGATAGGGCCGACACGACCGTCGACGCGAAC 31152 28 100.0 32 ............................ AGTGCAGCGCTCCGCAGCTAGGGCACGTCGCA 31212 28 100.0 32 ............................ ATGTCGGCGATGCCAACGAAAAGGCCGCAGAG 31272 28 100.0 33 ............................ TTGGTTCTCTTGATGAGGAAGTCATGCGCTTTA 31333 28 100.0 32 ............................ TTGCGCCTAACCACCTAACTGAGCATGCGAGG 31393 28 100.0 32 ............................ AGAAAGCCCCAGCGCATCGGCCACAGCGCCAT 31453 28 100.0 32 ............................ AGATAGGTGAGATGCCGGCGTTAACCGGCGAT 31513 28 100.0 32 ............................ GCCGTGAATCGCACCGCCCTCGGGTACACGTT 31573 28 100.0 32 ............................ GTCCCGCTCGGGTCGATTCGGCCGGTTTCTGC 31633 28 100.0 32 ............................ ATGTCGCCGTTGAGGCCCATCGCGGCGTCGGC 31693 28 100.0 32 ............................ ATCAATTCCTTCGATAGTGTCGGCGATCATGT 31753 28 100.0 32 ............................ CAAGTAATCAATATCCACAATTCGCTCTTGAA 31813 28 100.0 32 ............................ TCGACTATACGAACATAATCGACCCACGTATC 31873 28 100.0 32 ............................ TGAAATTCATCGCGCACCGCACGCGCAGTAAT 31933 28 100.0 32 ............................ CTGCGGTTGCCATGCTGGCAGACGCCGATCGC 31993 28 100.0 32 ............................ GAAAGGCAGGGGGAAGGGCAAAGGGCGACGGC 32053 28 100.0 32 ............................ GCAGAACAACGCCCAAACGCTGCAGGTAAAGC 32113 28 100.0 32 ............................ ATCGGCGCGTTGAAAGCCATGGGCGAAGAGGT 32173 28 100.0 32 ............................ AGACCCCTCATGCGTTCGGTTCGCAAATGCTC 32233 28 100.0 32 ............................ AGACTAACGACACCAGGCGCTTAATAATTTTT 32293 28 100.0 32 ............................ TCCGGCGCATCGAGCGTGATTTTGTCAGCCGT 32353 28 100.0 32 ............................ TGCAGGCGCTTTACATACTCGTCGGTTACTGT 32413 28 100.0 32 ............................ TATCCCCAACCCATCTAACCGAACATGCGAGA 32473 28 100.0 32 ............................ AATGCCACTACGTTAAGCCGGTCGGCGTCTAC 32533 28 100.0 32 ............................ GGCCACCAGTCCCGCCATCAGCTCGGAGAGAT 32593 28 100.0 22 ............................ AGCCACAGCACGCCAATCGTGA Deletion [32643] 32643 28 75.0 32 CGA...A.T....C.............G TTCTCATAAGAATACGTCTTCGCCTTACTAGT A [32648] 32704 27 75.0 0 ..GT.......C.C......-..C...T | ========== ====== ====== ====== ============================ ================================= ================== 29 28 98.3 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : AGCGCTGACGGCGCTGGTGGGATTCGACTGGATGAAAGGGTTACGGGACTATACCGACCTATCGCTCATCCAGGCTGTGCCTGCTGAGACGGCGTTTCGTACCGTCAGCAGAGTTCAGGTAAAGAGTAGCGTTGAGCGTATACGCCGCCGAGCCGTCAGTAAAGGTTGGCTGACTGAAGAACAGGCCCGGGAAAGAATACCGATGGCGAACGAGCAGCGCACCTCATTGCCTTTTATTGCCTTGAAGAGTCTCTCCACCGGGCAACACTTCCGCTTGTTCCTGAAACAGGGCCAATTACAGGAAAGGCCAACGCCGGGCGTTTTTAGTTTTTATGGGTTGAGTGCCTCCGCTACGGTACCTTGGTTTTAACCCTCTTTTTTCGTTCAGAGGTAACACATTGATTTTGTTGCCTCTGAACGGTATCTGAAAAATTAGGGTTAAACCGAGGTATTTGCCTGTTGTTCTTTAATAATCAGCTCATTAGTGATTTTTTTGTTCT # Right flank : TAGAAGGGATAAAACTTTACCGACACCTGTTAACCCGGAAGCAAATACTCCAACGACAGCGGCGGGTGACTCACCAGCCGCTCTTTTTGTATTTTGCTCAGCTGTTTGACGCGGTATTCCAGCTTCAACGCCGTTGAGCGATCTCCCACCTGGCAGTGAAACGCCAGCGTTAATTCCCCTTTGCCGCGCAGCGCCTTGGCACCTTTGCCGGCCTGATGCTGCGCCAGGCGGCGCGCCACGTCGGTGGTGATGCCGGTATACAGCATGCCGCTCGGTAGACGCAGCATGTAGAGGTACCAGAGAGTGGGGGAAGTGTCGGTCATCGTACGCCGTTTCGGTGGCCAGGGTCGGCGTATGATGGCATGTTCGCCATCACAATCCCATCCCCGGCCGCCGGTGCCTTACCGCTTTACCCCTGTTTTCCCGCCAGCTCGAAGCGCGGCGAGACGATGCCGTACAGCGTCCAGCCGAGGAAGGTGGCGATGGCGCCCCACATCATC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //