Array 1 32-1785 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNVH01000005.1 Streptococcus oralis subsp. tigurinus strain 859 S.tigurinus-859_Contig005, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 32 36 100.0 30 .................................... CTCATCGACTACCCAATCGTATTGCAAGAG 98 36 100.0 30 .................................... CTTGAGTGTCTTTTTGTACTTCTTTGGGCA 164 36 100.0 30 .................................... GTATTGTTGACCTTGATACTGGAGAGATTA 230 36 100.0 30 .................................... AAAACGCACAGGTGTTAAAACAACAGATGT 296 36 100.0 30 .................................... ATTGCTAAAATCAAGCATTACCAGTCGCTC 362 36 100.0 31 .................................... CTAATTCAAAAAGTCGTATTTAAGGCTTGTC 429 36 100.0 30 .................................... CTCATCGACTACCCAATCGTATTGCAAGAG 495 36 97.2 30 ...A................................ TGATCGCGCCAATCGCTGAACGGAATAGCT 561 36 100.0 30 .................................... ATTAGTTCTGACGATTTTGCTAAACTCTTT 627 36 100.0 30 .................................... TCAGAGTCTTACCTAGCCATGTGTACTCTT 693 36 100.0 30 .................................... GTCTCATTCAATCGTTCCACAGTTCAGTCG 759 36 100.0 30 .................................... CAAAAAACTCCACCAGTCCCGGTGGAGTTA 825 36 100.0 30 .................................... ACATCGCTCTACGTGTCAATGGGAATTCCA 891 36 100.0 30 .................................... CAATCGATGTAGAAGGCTATGAACAAGCTA 957 36 100.0 30 .................................... GGAGATATCAATCCTTTTAGTGTAGCAAAA 1023 36 100.0 31 .................................... CCATTGAACCGGTAGACATACTGAACTATAT 1090 36 100.0 30 .................................... CCTCCAAAGCTACGACAGTCTTATCACGCA 1156 36 100.0 30 .................................... CTTCGATGTAACCGACTTGAACGCAGACTA 1222 36 100.0 30 .................................... GGACGCAGTAACGTTCTTTGAACGCCGAAA 1288 36 100.0 30 .................................... TAGTGATGGACAATATGCTTCGGCGAACCA 1354 36 100.0 30 .................................... TTCCGTGCAGCAGTATCGCCAGGCGTGTCT 1420 36 100.0 30 .................................... AGCCCGCGAGGCTACTAAGGCTGGACTTCC 1486 36 100.0 30 .................................... TGAAGTATGTCGCACCGGTTGCTCACTCGA 1552 36 100.0 30 .................................... ATCAATACAGAAATGACAGTAGAGGAATAC 1618 36 100.0 30 .................................... TTGAACGTGAGAATGCTAAGTTGGCAGCCA 1684 36 100.0 30 .................................... AGTCAATACTTGTCTTGATTTCTTTTAGCT 1750 36 91.7 0 .................................TCT | ========== ====== ====== ====== ==================================== =============================== ================== 27 36 99.6 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : CTAATTCAAAAAGTCGTATTTAAGGCTTGTCG # Right flank : TACACAAAAAGCTACTCATTCTTTGGGTAGCTTTTTAACTATCCCCCTACACATAGCTCATTCCCTTATAGCAAAGGAAAACGGCTAGTGCGATAAAAAGTACAGTTGCTCCAATTCGCTGGCTGGTACTATACATCTTCCTCTCCCATTTGACTGGAAAAATGACTGCTAGAAAAGCACCGCCTACTGCACCTCCGATATGGCCTGCTAGGCTGATTCCTGGAATCAGAATACTTCCAATGATATTTATCACGAAAAGTGTCAGATAGGATTGCCCCAACTGCTGGATATAGGGGCTACGAGTTGCATAACGCAAGACGATAATCGCAGCAAATAACCCATAGAGAGAAGTGGAGGCCCCTGCTGCTAGGACTTTCGGTGTGAAAGCAAAAACAAAGAGATTGCCCATCATTCCTGATAAGAGATAGAGAAAAAAGAACTGCTTGGAGCCGAAAATCTCCTCCACCTGTCGTCCAAGAAAGTAGAGCGAAATCATATTG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //