Array 1 2125357-2124595 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV388085.1 Enterococcus pernyi strain Shenyang Scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2125356 36 100.0 30 .................................... GTCCAGAAGGACGCAAAGCTACTGGAGAGC 2125290 36 100.0 30 .................................... TAGTGAACAAGGTGCTGATGATTCTGGACA 2125224 36 100.0 30 .................................... TAAAGTCTTCACCATCGAGCTTTACAGCGA 2125158 36 100.0 30 .................................... GAGGGCGTTCCCTGGCAACTATTAGGCTAG 2125092 36 97.2 30 ..........................A......... GGCGCCTTGCCGCAAAACGTTGTCACACCA 2125026 36 97.2 30 ..........................A......... GGCGCCTTGCCGCAAAACGTTGTCACACCA 2124960 36 100.0 30 .................................... TCTAGTTCGTTTAATACTTCTTTTAATTGT 2124894 36 100.0 30 .................................... AGTTTACCCACTGTAACAGTTAAACCACTT 2124828 36 100.0 30 .................................... GAATCAATCTGCTACGAATGCCACAACAAA 2124762 36 100.0 30 .................................... ATCAGATACTTTATTATTAAAAGGATCAAC 2124696 36 100.0 30 .................................... AACATACTTCATTAATGATCCTAAAAAGTC 2124630 36 75.0 0 ......................TC...CATT.CT.G | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 97.5 30 GTTTTAGAGCTATGTTGAATTGAATGCTTCCAAAAC # Left flank : AGACAATTGAACGAAAAGCCAGAAGTGAAGTCGATGATCACTAAATTGACAGATACGATCAGTGAACTGATTGAGTATGAATTATTAGACCATGAGATGGACTTGGAAAGTGATGAGATCACGATTTTAGAATTATTCAAGGCGTTAGGAGTCAAAATAGAAACGACGAGTGATACGATTTATGAAAAAATAATCGAGATTTTACAAGTATTTAAGTATCTGACAAAAAAGAAACTATTAATCTTTATCAATGTTTGTTCGTATTTAACGTTGAAAGAAATAGAAGAAATACGATCTTATATTTCTTTATGTAACATGGATGTTCTTTTTATCGAACCAAGAAAAATTGCAGGAATCACACAAACAATCTTAGATAATGATTATTTTTTAATAGATGGTAGTATGGTAGAATAAAAGAAAATAAGTATTCAATTCTGAAGTTTTGCTATGAACGAATCGCGCGATTACGAAACTTTGTCAGAAAAAATTTTTTCTACGAG # Right flank : CTATACTGGATCTCAGTAAAAAGATGATAGTGGGATTCACTAATAAAAAGTACAGAGTCAGAAGAAAACACAGACACTTGTGTTTTCTTTTTTTGCTCAAACTGGACGAAACTCTTTACTCTTAGTAGGATAGGAGTAGAAGAAAAAGTGGGGTGTAAAGATGTTTAGTGAAACGTTAGTCCATTTGTTGGAATGGGTGACTGCGATTTTGAATATTTTCTCGATTTTAGTCTTGTTGGTTGGAATTTTTTTAGTTTTAAAAAATTTGATGTTGGAACGTCCATTGATTAAAGATTATGCGACACGTAATCGGCGCAATGCGGATATTCGAAAACTACTAGCTAGTTACATTTTGTTGAGTTTAGAAGTACTGATCGTGGCAGATCTCATCGAATCTGTCATTAAACCAACTTGGACAGACATTTTAAAATTAGCATTGATCATTATCATTCGCACGATCATCTCTTATTTCTTAAATTTAGAAATTGCGAGTCATGTAT # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGAATTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.80,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //