Array 1 2125357-2124595 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_KV388085.1 Enterococcus pernyi strain Shenyang Scaffold1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   2125356	    36	 100.0	    30	....................................	GTCCAGAAGGACGCAAAGCTACTGGAGAGC	
   2125290	    36	 100.0	    30	....................................	TAGTGAACAAGGTGCTGATGATTCTGGACA	
   2125224	    36	 100.0	    30	....................................	TAAAGTCTTCACCATCGAGCTTTACAGCGA	
   2125158	    36	 100.0	    30	....................................	GAGGGCGTTCCCTGGCAACTATTAGGCTAG	
   2125092	    36	  97.2	    30	..........................A.........	GGCGCCTTGCCGCAAAACGTTGTCACACCA	
   2125026	    36	  97.2	    30	..........................A.........	GGCGCCTTGCCGCAAAACGTTGTCACACCA	
   2124960	    36	 100.0	    30	....................................	TCTAGTTCGTTTAATACTTCTTTTAATTGT	
   2124894	    36	 100.0	    30	....................................	AGTTTACCCACTGTAACAGTTAAACCACTT	
   2124828	    36	 100.0	    30	....................................	GAATCAATCTGCTACGAATGCCACAACAAA	
   2124762	    36	 100.0	    30	....................................	ATCAGATACTTTATTATTAAAAGGATCAAC	
   2124696	    36	 100.0	    30	....................................	AACATACTTCATTAATGATCCTAAAAAGTC	
   2124630	    36	  75.0	     0	......................TC...CATT.CT.G	|                             	
==========	======	======	======	====================================	==============================	==================
        12	    36	  97.5	    30	GTTTTAGAGCTATGTTGAATTGAATGCTTCCAAAAC	                              	       

# Left flank :   AGACAATTGAACGAAAAGCCAGAAGTGAAGTCGATGATCACTAAATTGACAGATACGATCAGTGAACTGATTGAGTATGAATTATTAGACCATGAGATGGACTTGGAAAGTGATGAGATCACGATTTTAGAATTATTCAAGGCGTTAGGAGTCAAAATAGAAACGACGAGTGATACGATTTATGAAAAAATAATCGAGATTTTACAAGTATTTAAGTATCTGACAAAAAAGAAACTATTAATCTTTATCAATGTTTGTTCGTATTTAACGTTGAAAGAAATAGAAGAAATACGATCTTATATTTCTTTATGTAACATGGATGTTCTTTTTATCGAACCAAGAAAAATTGCAGGAATCACACAAACAATCTTAGATAATGATTATTTTTTAATAGATGGTAGTATGGTAGAATAAAAGAAAATAAGTATTCAATTCTGAAGTTTTGCTATGAACGAATCGCGCGATTACGAAACTTTGTCAGAAAAAATTTTTTCTACGAG
# Right flank :  CTATACTGGATCTCAGTAAAAAGATGATAGTGGGATTCACTAATAAAAAGTACAGAGTCAGAAGAAAACACAGACACTTGTGTTTTCTTTTTTTGCTCAAACTGGACGAAACTCTTTACTCTTAGTAGGATAGGAGTAGAAGAAAAAGTGGGGTGTAAAGATGTTTAGTGAAACGTTAGTCCATTTGTTGGAATGGGTGACTGCGATTTTGAATATTTTCTCGATTTTAGTCTTGTTGGTTGGAATTTTTTTAGTTTTAAAAAATTTGATGTTGGAACGTCCATTGATTAAAGATTATGCGACACGTAATCGGCGCAATGCGGATATTCGAAAACTACTAGCTAGTTACATTTTGTTGAGTTTAGAAGTACTGATCGTGGCAGATCTCATCGAATCTGTCATTAAACCAACTTGGACAGACATTTTAAAATTAGCATTGATCATTATCATTCGCACGATCATCTCTTATTTCTTAAATTTAGAAATTGCGAGTCATGTAT

# Questionable array : NO	 Score: 6.14
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTATGTTGAATTGAATGCTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:66.67%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC with 95% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-0.80,-2.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [9-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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