Array 1 320248-328564 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJGYT010000001.1 Psychrobacter aestuarii isolate Psychrobacter aestuarii SC35, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 320248 32 100.0 33 ................................ ACAAAATCATCTATTAAGCATGAGTATTTTAAA 320313 32 100.0 32 ................................ TTTTTCGGCGTCAGCTTTCGCTTGGGCTTCTT 320377 32 100.0 33 ................................ GATACGCGCCTTGGCCAGCTCTTTATCCGCGGT 320442 32 100.0 34 ................................ CATGTATAGAAACGCACTCTCGCCAAAACACAAC 320508 32 100.0 33 ................................ ATAACATCAATGGCAAACAATGCGCCTGCCTGC 320573 32 100.0 33 ................................ TGCTGTGCTGTTGTCTGCCATTATGTTCATAAC 320638 32 100.0 34 ................................ CGCGATGCTCGCAGGCAGGTCGGTGAGTTGCTGT 320704 32 100.0 32 ................................ ATCGTGTTGTTGTTGCCGCCCATGAATTTGCC 320768 32 100.0 34 ................................ GTTCTTGTTGCAGGTGTTTGGTTATCACGTCCAG 320834 32 100.0 33 ................................ ACCTAATGGTTTTAATGATGGATCTCGCGCAGC 320899 32 100.0 34 ................................ TGAAAAGTCACCAAAGATATCAGGGTTCACGCCA 320965 32 100.0 33 ................................ CTCTCCTATCTGACCTGCATGGGCTAGCTCGAA 321030 32 100.0 33 ................................ ATAAGCAAGGCGAGGGTGGACGGTCGATGTGGC 321095 32 100.0 35 ................................ GGTCATAGCTTGCTTGGCTTGCTGCCCTAATGACT 321162 32 100.0 34 ................................ GGATATGTTCGTGTTGCGGGTAGTCATAATCACC 321228 32 100.0 34 ................................ GCTGCTCTACCATTGAGCTACAAGTCCCAAAGAG 321294 32 100.0 34 ................................ CCTATCGTGGCATTGTCTTTAATCTCGATATGTT 321360 32 100.0 33 ................................ TACCAAGCTGCAAAAGATGCGGACCATGATTAA 321425 32 100.0 34 ................................ CGTGAAAGCCAAGTTGCATCGCGACTGTATGACA 321491 32 100.0 32 ................................ CCATGCTCGACAAGCTATACCCATCGAGCAAA 321555 32 100.0 35 ................................ GTGCGGACTAAATTTTGCTAGCAGTGCGTCTATGC 321622 32 100.0 33 ................................ TCCAGTTTGGCGGTTAGTAAAAATAATGCGAGC 321687 32 100.0 34 ................................ ACATGACGCACAAGTGATATCACTTGACCCGCCG 321753 32 100.0 35 ................................ TAATCTAGCGCCTGTTTCTGCGCTTTTAAAGTGTC 321820 32 100.0 34 ................................ CAACTGTGTGGGGTCGGACAAATAAGCGACCGTA 321886 32 100.0 34 ................................ GCTGATGTAGCACTAAATACCTCGGCGGGTGCGA 321952 32 100.0 35 ................................ TTGTGGGTCGTATGTCACCACATCAAGACCAGGTA 322019 32 100.0 33 ................................ CCAGATGGAAGTAAATACGTCCTGCTTATTCCA 322084 32 100.0 33 ................................ ATTAGAACGCCGTTTTAACCCATTTGAACACTT 322149 32 100.0 35 ................................ AGTGCATGACAGTCTTTATCGAGCTGGTCTTGACG 322216 32 100.0 32 ................................ AGAATATAAATTAGATATAAATAGCGTAAGAG 322280 32 100.0 35 ................................ TATAACGTCTCCTTCATTGGCTGTAGGTGCATCTT 322347 32 100.0 34 ................................ TTAGATAGCTCTAAAGCAGGTCAAGGTAATGTAA 322413 32 100.0 32 ................................ TCTGACCAAACGCCAACCAGCATAGTGCTGTC 322477 32 100.0 33 ................................ AGGCGGTTGGCTGTATGGATGTTGACCAGCTTT 322542 32 100.0 34 ................................ ATGGCGGGCAACCGTGTCGGTAAAACGATTGCGG 322608 32 100.0 34 ................................ ACGGCTTTGGTGATGCCGCTAAGAGTGTGGCTAA 322674 32 100.0 32 ................................ ATGGGCTTTAACCCTTACCTAATCAGTATGGG 322738 32 100.0 35 ................................ AGCATTAACAAGCTCTATAAACAATCTAACCACAG 322805 32 100.0 34 ................................ TGTACAGGACTTCTTATCTAAACACTTAAACATA 322871 32 100.0 33 ................................ TCGCAATGCTTGGGTTTGTCTTGGAGAATTATC 322936 32 100.0 34 ................................ GTATACAGAGCGTGATGCTGTTGCGATGGCTCGT 323002 32 100.0 33 ................................ CTTATACTCGCCGCCTCACTATCACTGATTATT 323067 32 100.0 35 ................................ GAGCTACTCACAGGTAACGGCACATACGACATGGT 323134 32 100.0 33 ................................ CCTATTTTGGGACGGGACCGCGCAGCCAAGAAC 323199 32 100.0 34 ................................ TTATCGCTGATTGGACGGTTGGCGATGGAAATGG 323265 32 100.0 36 ................................ ATCAGCATTCATGATGCCGACATCAGCCACCATGCC 323333 32 100.0 34 ................................ GTGTAGAGCGTTATATCTCATGGACTAAGCGTAG 323399 32 100.0 32 ................................ TATCGGCTCTATAACTCTTTTATAATCACCTG 323463 32 100.0 33 ................................ TTTTAAGCCACTGATATAAGCCTGTATAAGTTC 323528 32 100.0 34 ................................ TGTCTTCGACAGTGTACTATACAGTGTACTTATA 323594 32 100.0 36 ................................ CGAAGCTATCATGTAGTAAAGGATAAAGAGTCTAAA 323662 32 100.0 35 ................................ GATTTCAGCGTGATATTTTTCAGTCGGCGTTTTAC 323729 32 100.0 34 ................................ TTGCTTAACAGTTTAGACCTAATGATATAATGGA 323795 32 100.0 34 ................................ ATGAAAAGTGACCCATACCATTTTAAAATCGTGT 323861 32 100.0 33 ................................ CCTAACACGTCTTAACTCATTATTATAGTTAGC 323926 32 100.0 33 ................................ TTTTTATTAATCGCTAAGAAAAACAGTAAATCT 323991 32 100.0 34 ................................ AGGGTATAAAGAACCTATAACTGTAAAATGTAAA 324057 32 100.0 34 ................................ ACGTACACCTACAAAACTTCTATAACACCTGTAA 324123 32 100.0 35 ................................ GTTACAGCACCTACTATGGGCACTCTTTTAATAAC 324190 32 100.0 34 ................................ TGCATTATCTACTATCTTTTGTGCTTCAGCTACC 324256 32 100.0 33 ................................ CAGTTATTGAAGCCCAAGCGCTAGATATAGCTG 324321 32 100.0 34 ................................ AGAACTATACCCCTTAGCGCCTCTCTAACAGCCC 324387 32 100.0 34 ................................ TACCTAAGGAAAGTAGATAAACAAGATTTAAGAC 324453 32 100.0 35 ................................ TAGGCTCTTAGGTGCTTCTAAAGCTTTAGATTCTG 324520 32 100.0 34 ................................ AGAACTATACCCCTTAGCGCCTCTCTAACAGCCC 324586 32 100.0 37 ................................ GGCTTATCATCGAATACATATGACATACGCGATGATA 324655 32 100.0 33 ................................ AGCGCAGCAACGACAAGTGGTCAGAGTCTATGC 324720 32 100.0 33 ................................ TGCGCGGTCGAGTTTATGCTGTCTGTGCTTAAA 324785 32 100.0 33 ................................ GAGCATTACAGTATCACGCTTGAGATTGAATGC 324850 32 100.0 34 ................................ AATACGAACAAAACCTGCGCCAAAACCGCCAGCC 324916 32 100.0 35 ................................ ACCCCAAAGACTATATCAGCAAGACGAATTTTCTT 324983 32 100.0 35 ................................ GAGTAAACAAAAGTAGTTAAGTTTATATTGATATT 325050 32 100.0 32 ................................ TGCCAAAGATTCTAAGCTCGTGACCTCCGTCA 325114 32 100.0 32 ................................ TTTTTAGATTGTCTCTTTAGAGCCTCCCTAAA 325178 32 100.0 35 ................................ TAGGATATTCATTTGTATTTTAGTTTATATTAATT 325245 32 100.0 34 ................................ AGCTTGGCAAAAAGATTGCTGAGATACAAAGCGC 325311 32 100.0 33 ................................ TTGCCATCTACAAGCACGATCAACAAAAAAAGC 325376 32 100.0 33 ................................ ATGTTCGCGGAATTCTTTAACGAACTGTTTTGA 325441 32 100.0 33 ................................ TAAATCATTAGTCAAAAGCGTAGTAACATCAAT 325506 32 100.0 34 ................................ GTACAATTTTGGTCGTTTACATCGTCCATATTGA 325572 32 100.0 34 ................................ ATCGTTGTTAAAGGCTGGACGGGCGACATTGCTG 325638 32 96.9 33 ......................A......... AGATTCATTATTAGGTAAAAGTTCAGTTAATGC 325703 32 100.0 35 ................................ CTTGCATAATCTAAGATATTCTTAAAGATTCCTTG 325770 32 100.0 32 ................................ GGCGGACAGATACGCTTTTACTTTGAGTCTGC 325834 32 100.0 34 ................................ TGCGTTGCAGATAACACAGGTACTTACAATATGG 325900 32 100.0 34 ................................ ATGCTTTAAAAGTTGCAGTTGTAGTCGCAACAGT 325966 32 100.0 35 ................................ AATAATAGCGCTACGCTCTGACCATACCCCAACAA 326033 32 100.0 32 ................................ TCGTCATAGGCTTGGATTAAGTGCGCGACTTA 326097 32 100.0 34 ................................ AAAACAACCGACAGGCTTACAGATTGGTTCTCAT 326163 32 100.0 34 ................................ TTCAATGGTAGGGTAGAAGATATCGCGTATCTGT 326229 32 100.0 35 ................................ CAAGCATACAAGATGACCGAGCGCGATATTTTGGC 326296 32 100.0 34 ................................ TAAGGTGATGGATAACTGCGCCAGAGGGTATAAG 326362 32 100.0 34 ................................ GACAGTCATTGTGCCTAACAGTGGATAGTAAACA 326428 32 100.0 35 ................................ TCAGCAAAGCGCGAAGAAAATATGATACGCGTTGA 326495 32 100.0 34 ................................ AAAACAACCGACAGGCTTACAGATTGGTTCTCAT 326561 32 100.0 34 ................................ TACATATTGTCCAGTACAATTTTCTACTTCACAT 326627 32 100.0 35 ................................ TGGGCGCTCAACGCGAAGTAATACGCTCGAACAAC 326694 32 100.0 35 ................................ CGACATAACCTACACTGTAGAAATCCTTTGGAAGC 326761 32 100.0 34 ................................ ACCTTTACCGTATACAACGGCGTTACCATATCGC 326827 32 100.0 34 ................................ TTGCTAATATCGAGGCTCTAATCGGGGTTTATCA 326893 32 100.0 34 ................................ TGCCACGTATGAGCCAGTCAACACGACAAGCGAT 326959 32 100.0 33 ................................ GTACCGAGCAGTCACGCGCGGGCGCTGAGAAGC 327024 32 100.0 33 ................................ AAGGGCTTTATCGCATCTTGCAAGGTGCCCTCT 327089 32 100.0 33 ................................ GTTGCCATCAAGCGTGTCATCACCGTAAGTACC 327154 32 100.0 33 ................................ CAACAAACAATCCATGACCGCGTGCGTGTCGTG 327219 32 100.0 33 ................................ AGGCGCTCGAATCGCAAGACGTGCTGACGGCTG 327284 32 100.0 34 ................................ ACAGATGCGCCGTGACAGGCGTTTACCAGTATAT 327350 32 100.0 35 ................................ AGCCCTGAGTGCAAGCCCAACGAGTGGGCAGGTCT 327417 32 100.0 32 ................................ CCCGGGCAAGTCGATTTGTATGTGGAAGCCAC 327481 32 100.0 35 ................................ CACAGCGTTGGCGTTGGGTTTATAACTGTTATGTT 327548 32 100.0 34 ................................ AAGTCGTCAATGGTAAACACCGAACAACGATGAT 327614 32 100.0 35 ................................ GCTGCCATTAGTGCCCGAGCCAATAGCCATTCGGC 327681 32 100.0 33 ................................ TGCTGCATTGGAGACAGGCAATCAAGACTTGCA 327746 32 100.0 33 ................................ CCTTTATGGGGATAAATTGAATATATCCCATAG 327811 32 100.0 33 ................................ ATCAATCACAGCTATTTCTATGATTTCATCATT 327876 32 100.0 34 ................................ TCGGTGGGGTTTACGCTCGATGAACTAGATTCGG 327942 32 100.0 34 ................................ TGATAGCTTGTTAAACATGGTTTTAACTCATTTG 328008 32 100.0 35 ................................ CATTTCTGCGCTACTTCCTTGACGTAGGCTTCTTT 328075 32 100.0 34 ................................ CGCCCAGCCAAACAGATGGTCGACCGTACGCCAG 328141 32 100.0 34 ................................ AACGCGGTCATGGGCGGCTATGTGTTTCAGCTCG 328207 32 100.0 33 ................................ TTGGATAAGCTTTGTTTAAATAATCACGAAGCC 328272 32 100.0 33 ................................ GTGATTGCTTTGCGCAAAGACAGGAAGGAGACC 328337 32 100.0 33 ................................ CAGTGCAGGACGATGTGGTCGGTGATGTGTCGT 328402 32 100.0 33 ................................ ATAGTTTGCGCATTATTGGTTAGCGTGCTTTGA 328467 32 96.9 34 ..............C................. GCATAATGTAGTCGTGATTATGACAAAAATACCC 328533 32 81.2 0 ............A.AA...AC..........A | ========== ====== ====== ====== ================================ ===================================== ================== 127 32 99.8 34 TTCGCACCCATCGCGGGTGCGTGGATTGAAAC # Left flank : CTCAGTGCCAAGCGGCTACGTCATATCGCCAAGCACTGTCTAAATTATGGACAGCGCGTGCAATATTCTGTATTTGAAATCGAAGTCAATCCTGCTGAATGGACAAGGCTAAGAGCAATTCTTGAAGACATTATTAATCATAGTACAGACAGCTTACGTTACTACTATTTGGGTAAAAACTGGCAGCACAAAGTCGAGCATATTGGCGCAAAACCTGTGTTAGACTTAAATGATGTTTTATTGTTTTAACAGTAATCATATAGTTTGTGTGATGAGGCGTGGCTCAGTCGTCATGTGTCCAATGCGAGCCTATAGCGTACATAAAAATCCCAGTAGATTCGCATTATGCAATAACGCTATTTAACAACTTGATTTTAATGACTTTATTTTTTATAAGAAAATTTTGGTAAGTGCTATATTTGCCAAATTTGCCTATTATTCAGCTGTTCGCGGATTTATGGTTTTAACCATTGATTTATCAAACAGTTAAACAATGGGCT # Right flank : AGGTCTGAACTGTCGCAACTTTTGCGACAGTTGCTTCTTATCCATTATGGATGCGAAACTAAAATCCACTCTTACAAAACAAAAAAACCAAGGCATTGCACCTTGGTTTTTATTCATACAAATTGGCAAAGACTTAGTCAATAAAGCTGAGCCAGTCCATGTATTTTTCATTACGACCATGTACCACATCAAAGTATAGGGTCTGTAGTTTCTCAGTCAGCTCACCACGTCCACCATTACCGATGGTGCGGTCATCATATTCGCGGATAGGCGTGACTTCTGCCGCTGTGCCTGTCATAAAGATTTCGTCAGCAAGATAAAACTCATCACGGGTGATACGACGCTCAACGACTTTGATGCCCAAATCTTCAGCGAACTGAATGATGGTGCGGCGTGTGATGCCGTCCAGCGCGCCACCTGCCAAATCAGGGGTGTGCAATTCGCCGTTTTTCACGAGGAATAAGTTTTCGCCTGAGCCTTGGCAAACGTAGCCTTGTGGG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCACCCATCGCGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.00,-8.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //