Array 1 24997-24636 **** Predicted by CRISPRDetect 2.4 *** >NZ_FONO01000025.1 Methylobacterium sp. yr596, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 24996 31 100.0 35 ............................... CCACATCAGCACGGCTGGCCGGGGTGAGGGGGCTG 24930 31 96.8 35 ..........T.................... GTCAGCTCTCGACATGGGATGTCTCCTTGGGTGGG 24864 31 100.0 34 ............................... TTGGGGCGGTGCTTGGCGCTCTCCATGCCGAGGA 24799 31 100.0 34 ............................... ATCACCCAGGAGGTCGAGCATGGCCGGTGATCGT 24734 31 96.8 35 ............A.................. GTCGTATTCCTCCATCACCGGCGCGTCGTGGGTAG 24668 31 80.6 0 ................C.....T.C...TGA | G,C [24639,24642] ========== ====== ====== ====== =============================== =================================== ================== 6 31 95.7 35 GTCGCCCCCTCACGGGGGCGCGGATCGAAAC # Left flank : TCGTCTGGAAGTGAGGCGGCGCCATGCTGATGCTCGTGGCCTACGATGTGAGCACCGAATCCGCCGCGGGACGCCGGCGCCTGCGCCGCGTCGCCCGTGCCTGCCTCGATGACGGCCAGCGGGTGCAGAACTCGGTCTTCGAGTGCGAGGTCGAGCCGGCCCAGTGGACCGCTCTGCGCGCCCGCCTCGTCGCCGAGATCGATCCGGCGCAGGATTCGCTCCGGTTCTACCGGCTGGGCGCCCAGGCCCGCGGCCGGATCGAGCATGTCGGCGCCAAGCCGATCCTCGACCTCGAGGGACCGCTGCTCTTCTGAGCGGCCTGCGCGAACCCCGAGCGGACAGCCCCCGCCCGGAGGATTCGCGCAGCGGTGATCCCGTTGCGGCCACACGCCTTTTCCACCCGCTTCGCCCCTGCCGCAACTCGGGCCGCCCCCCGCCGGGGGAGGTTCGCGCGCAGGCGCGATATTTCGTTTTCAGCGCAAATGGTTACTGTGGTGGCC # Right flank : TGTTGTCCTCCGGGGCGCGGTAGGCGTCGTCCTCCAGGCGCAGGCCGGTCCGGGGATCGTAGAACGCCATGTCGTCGAGGCGCAGCAGGGCGCCTTCGAGCAGGGGGTGGACGGGCCGCAGGCGCCCGAGCGCCAGCCAGCGGGCGCGCAGGGCCGGGGGAACCGGCACGACGTAGGCCTGGAGGCGGCGCAGGTCGTCGCCGAGGGGGCGGTCCATGGCGGCGATCCGCGCGAGCAGCGTCTCCGCCCGGTCGTCGTCGGGGGCGGCGCGCCAGGGCACGATGACCGGCTCCATCGCCTCGTCGATGAGGCGGAACGCCCGGGCAATGCGGGCGAAGGGGAAGGCCTGCGTCGTCGCCCGCTCGGCGAGGGCGGGCAGGATCGGCCAGGTCTCCCCGTCGAGCCGCGGCGCGTCGAGGGCGTGCTCGCCCCGGCGCCAGTAGACCTCCTGGAAATACGCCCGGATGGCGTCCGGGGCGAGCGGGTCGTCCCGCGTCCGC # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCTCACGGGGGCGCGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCCTCGCGGGGGCGCGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-7.30,-7.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 44782-45116 **** Predicted by CRISPRDetect 2.4 *** >NZ_FONO01000015.1 Methylobacterium sp. yr596, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 44782 28 100.0 33 ............................ GTCTTCCTCTCGTCTTTCTGCGCCCGAAGGAGG 44843 28 100.0 33 ............................ CTCGTGCTACGCGGCATCACCGCTGTAATCTCC 44904 28 100.0 33 ............................ CGACAACCGCATGAGCGTCGGCCAGAAGCTGCG 44965 28 96.4 33 .........................C.. TCCGCCCGATCCGGAGGAGATCAGGCCATGCCC 45026 27 96.4 33 ............-............... CGCGACCTTCACCAGAATCGACACGCAGCTCGT 45086 28 89.3 0 A............C...........T.. | T,AT [45096,45110] ========== ====== ====== ====== ============================ ================================= ================== 6 28 97.0 33 GGCTCCCCCGCCTACGCGGGGATCGACC # Left flank : CCGCGTCGAGCCCCTGCCACCAGACCGGCCGGCGGCGGGGAAACCCCTTCACGTCCTCGCGCCGCAGGGGCGGCAGGTGCTCGCCGAAGCGCTGGCGATACGCCGCGTAGAGGTCGTCGCGGTGCCCCGCCTCCTCCTCCGCCATCGCCTCGAACACCCCGGCCGAGCCCGGCAGGTCGGCCCGCAGGCCCTCGGCGAAGCTGCGGTAGATGCGGGAATCCTCCTCCTCGCTGGCGATGGCGAGGGCCAGCACCTCGCGTTCGGTAAGATCGGTCAGGGCCTTCACGGGCATGCTCCAGTCTGGAATGGATCCAATCTATAGATTGGATCCATTCCAAACAAGCGCTCGCGTGCATCGCACCATCCGGGGCCGGGCGTCGCACGGACTATGACCCTCGACGGCCGGGCCGGTCTCGGGCATCCTGACACACCGCCGGTCGCTTATCTTCCCCAACGGCATCTTTGACGTCGTGAACGGTATCAGTGAGTTAGTTGGCAGA # Right flank : CACCTTGGAATGCGTGCGTTGCCGCACGCCGCTGCCCGCATCTGCGCCCGCGCGGCGGTTGCCTCGCGGGCCCGAACGGAGCATGACGGCGCCCGGATTCGCGCGGGCTTCCTTGTCGTCCCGCGGGTGCGGGGCGGCGCGGGGTCTTCTTGCCGCGCACCGAAGAGCCCGTCCTCCCGAACGAAGTGCTGCCGATGAGCGTCGTCACCCGCATCGCCCGCAGCCGGGCCGCCCAGGAAAGCCTCGGGTTCCTCGGCGCGAGCTACCTGAAGCTGGTGCAGGGCACGAACCGCTTCAGCCTCGATCCGCCCGGAGCCTACGACTGGCTCACGCCGCTGCGGCCCTTCATCATCGCGATGTGGCACGGCCAGCACCTGATGGTGCCGTTCGTGCGCCGGCCGCAGGACCGGGCCGCCACCATGGTGTCGCGCTCGGTCGACGGCGGGGTGAACACCGCGGTCCTGGAGCGGATGGGCGTGCGGGTGATCCGCGGCTCGGGC # Questionable array : NO Score: 2.99 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCCTACGCGGGGATCGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //