Array 1 222269-224508 **** Predicted by CRISPRDetect 2.4 *** >NZ_FUHV01000013.1 Pediococcus acidilactici strain S7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================================================================================================== ================== 222269 36 100.0 30 .................................... TAATATTTTCCTCATTCATATCACCGTCTT 222335 36 100.0 30 .................................... CCTTAATTCGAAAGACGTTTCGGCTGCTTT 222401 36 100.0 30 .................................... CTTACAGGCAGAAGGTTCTGCGTGCCATTT 222467 36 100.0 30 .................................... TGATTAATATAGGATCAAAAGTTCAACCAT 222533 36 100.0 30 .................................... GAATAAGAGTTTATACAACTTGCGCAATGA 222599 36 100.0 30 .................................... ATACAGGTGAAATCTATTACAGGGTGTACC 222665 36 100.0 30 .................................... ACAGCGATGCTAAATACATCGTGTTGGAAG 222731 36 100.0 30 .................................... TATAAAAACTTGGGGAATAACATTTATGAG 222797 36 100.0 30 .................................... AAGTAGTAGCTTACCCCGTTTAAGGTTAGA 222863 36 100.0 30 .................................... TTGTAGGTTCGTAGTCGGAACTATCACTAT 222929 36 100.0 30 .................................... AATTTAATGAACTTAGAGAGCTTTCAAGCG 222995 36 100.0 30 .................................... TGGTAAAGAACCATATGGTGGAGATGAAGG 223061 36 100.0 30 .................................... GCTAAGTCAATTGCGGAATGTGGACAAGAC 223127 36 100.0 30 .................................... CAAAAGGGCGGAAGCTGGTATCCGGATGTC 223193 36 100.0 31 .................................... GCGCGTAACTATGCCAACCTTAACCAAGACC 223260 36 100.0 30 .................................... GGTGACCATACTGACCCTTACGGCTATCTA 223326 36 100.0 30 .................................... ACCACAACAATAAAATCATTTCAATAAGCA 223392 36 97.2 30 ...................A................ CAATCGAAGATGGCTGGATGCCTTGGGTTC 223458 36 100.0 30 .................................... ATGACATTACTAAAGGTACTAAGGGTTGGA 223524 36 100.0 30 .................................... AAGATGATTTCAAGCCCCTATATTTCATGT 223590 36 100.0 30 .................................... ATAGATCCACCCGAATAGCCATTGGAATCA 223656 36 100.0 30 .................................... TACCAATCGAGACATAAATTAATTGTGCAC 223722 36 100.0 30 .................................... TGTAGGCTTTTTGTTTCTTCGCAACGTCGC 223788 36 100.0 30 .................................... ACCTGTCCTAGGGCGTTACCAACACCATAG 223854 36 97.2 30 ....T............................... CTATAACCATTTGTTTCTGGGTTTAAATCA 223920 36 94.4 30 ....T............G.................. TCGCTCACATAAATAGCCTTCTTAGCATTT 223986 36 94.4 30 ....T......................A........ CCGAGCAAAAGATTACAAGCAAATCTTATG 224052 36 97.2 30 ....T............................... ATTCCCTATTCCGACACAGTCATGTAAGGT 224118 36 97.2 30 ....................T............... CTTCAATGTCTAAAGCTTGCTTAGCTAACG 224184 36 97.2 30 ...........................A........ AATTGTTTCTTGGACTGTTTGCCAATATTC 224250 36 100.0 30 .................................... ACGATTTACCGTTTTAGGAATGATTTAGAT 224316 35 83.3 122 .......-......................GGC.AT GAAAAAAAGGGGAGTTTAATAATTAATGCTCATAGAGTTTAAATTTGGTATAATGCGAAATGGAATTTGAGAATGATTTGGTATTGGCGATTTACTCACAATAAAAATAAGTTGCTTTTATT 224473 36 91.7 0 .................................CGT | ========== ====== ====== ====== ==================================== ========================================================================================================================== ================== 33 36 98.5 33 GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Left flank : CCAAAATTTAGTTATTCAAAAGTATTTAATTAAGATTGAACGGGTTTTTGCCGAAGGATTGGTGGATGAGCAACGTAACCAAATTCATGATCAGGTCAATCAACTATTTAATACGGTTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTATTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAGCGTGGGTAACCCATATGGTATAATTGAAGCGATTTTGAAGATTCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTAATGTTGCACATTATTTGACAGCGACCCAAATTGAAGAACTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATTGAATTCACAGAAATAGGCAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCAGTAATTGATGAAATTTTAGTTAGAAAATAACG # Right flank : TAGAGCTAAAAATCTTAGCTCAACGAGAAACGAAAACTCCTATAAGTTAATGATTACTTTAACTTATAGGAGCTTTTTGTAGTTAGAGAAGGATGTTAAATAATTGAATAATGCGTCTTATTGCGAGAGACAATAAACATTATTTAAAATTGAATACGAGAGTAACGTTAATTTTTGAACAGCTCTCAAAAAAGAAGAGTAGAAAGATAAGTTTGTTTGTAAAATTAAAGTTAAGCTTTTTTCTCATAATTTATGACTTCCTTTGTATTTGTTTTATAAATTTATAATAAAAGCAAAATTTTATTATATCAAAATCATCAACAATTTTCGAAATGATTATACCCCATAAACTTAGAAATCACAATAAAATAAGTACAGCGACCTTATATTTTATCCAGTAGAACACATTAAATAACTGATATAAAGAAAAAAACTACAGACAACAAAAACAGCCCAACCGAATCCCAATCCAGTCAGACCGTCTTAAATTTCCTACATCA # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.23, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //