Array 1 134660-133758 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JACLZD010000002.1 Collinsella tanakaei strain An792 An792_contig-115_1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	=================================	====================================	==================
    134659	    33	  90.9	    35	...........T.T..................T	CGGGCCTTGCCGTCAAGATGGTTGAGGAACCCAAC 	
    134591	    33	 100.0	    33	.................................	GTAGGTGGCTCGCGTGGAGGTCATGACGGCCAC   	
    134525	    33	 100.0	    35	.................................	TGCTCAAAACCCTTTGGGCGTGCGCTGCTTGCCAT 	
    134457	    33	  93.9	    32	.............T..................A	AGGCGCGCGTGTCCACGCTCGAGGGCACCGAC    	
    134392	    33	  97.0	    36	................................T	GGTGTGACTCATGCGGCGAAACCTATTTAACGTCGG	
    134323	    33	 100.0	    34	.................................	ACGCGAACATGTCCGGTGTCTCGGACCCTATCTC  	
    134256	    33	  93.9	    35	.................C..............G	TCGACACCATCAAGGCCATGCTCGCGCAGGACGAG 	
    134188	    33	  97.0	    32	................................G	CCCTCGTGAGGCGCGGCAAGCGCAGCAGGATG    	
    134123	    33	  97.0	    34	................................T	TGTTGACGTATCTGTTCAAGTTCGTGTCATACGT  	
    134056	    33	 100.0	    34	.................................	GCGCCACTATCGAGGCTACCGCCGCGCTTGCCTA  	
    133989	    33	  97.0	    33	................................G	ACCATACGAACTCTGACCACTCGCTGTAACCGT   	
    133923	    33	  93.9	    33	.............T..................G	GCCGCATGCTCGCAGAGGCCCCCAATCTCAATA   	
    133857	    33	  84.8	    35	.....G.......T...C.T............G	GCACCATCGGTACGGTTTACCCGCCCGATTCCGTG 	
    133789	    32	  72.7	     0	......TT.A.T....A....C.....-...TG	|                                   	
==========	======	======	======	=================================	====================================	==================
        14	    33	  94.1	    34	GTCGCACCCCTCGCGGGTGCGTGGATTGAAACC	                                    	       

# Left flank :   CCCGCTCGCCGAGAGGACCGGTTTTTGCCAAAAGGACCTCGATCTACTCTGGACGGCATTCATGAACATGTTCGAGGTCGATAGGAGCGCATCGCGTGGTCTCATGACTTCAAGGAAGCTCATCGTGTTCAAGCATGCGAGCAAGCTCGGAAATGCGCCCGCGGAAAAGCTGTTCGAGCTCGTTCACGTCAATCGCGTGATTCCGCAGGGGCAAGCTGCCCGCTCGTATGCGGACTATGAGATAAGTATCGACACTGAGGGGCTGCCCGACGGGGTGGAGGTTAAGGAGTTCGACTACATCGCCCCGATGGTCTAAGTGCTTTCTGTTCAGCATGGGGGTTAACCGTGTATTCCGAAGACGAGCTTCTCCCGTTATCCGGCCTTCAGCATACGTCGTTTTGCGAGCGGCAATGGACGCTCATCCATGTCGCATAGCCTGTGTATTGCGTCAATGGGTGAAGCTCGTAATTGATGCGGAGGGTGTTCTGGAGCTGAGCGCG
# Right flank :  GAGCTTTCACGACTTCGGGGAATGATGACGGGAACACCGCTGCTAGAACCGCTGCCGCGGATTGCTGCACGTTGAGCGTTTGCTCGATCAGGGGCCCGACAATGCCGTGTTTCCCGATTCTCTGCTGCTTGTTTTGCGATTGCTTGTTGACACCCTGTAACGTCTGATGACGCAAGCATCTTGAGGCAGTCTAAAAAAGATGGATCTGAAGATCTCTTTATCATCGCTCCGCGACATTTCGGCAGGGGGTCGTGGATCGATGCGACGATCGCGCATGGTCGATGTGTATCACGGTGTCTTGCGCCTCTTCCCGTGGCGCGTGCTCTCGCGGACGGGTAGACTGGAACCCAGTTCGCAAACGAGAGGATGACTTATGCCCGATACCCGCCGCACGTTTGCCGTCATCGACGGCAACTCGCTGATGCACCGCGCGTTCCACGCCGTGCCGCCCACCATGAATGCGCCGGACGGCCGCCCCACGAACGCCATCTTCGGCTTCC

# Questionable array : NO	 Score: 5.41
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.44,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCACCCCTCGCGGGTGCGTGGATTGAAACC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     F [6,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-7.00,-6.60] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [13-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [38.3-45.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.74,9.41   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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