Array 1 8717770-8711205 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP068048.1 Myxococcus xanthus strain R31 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 8717769 37 100.0 33 ..................................... TGTTACGTGGTGCTCCGCTGCGAGGGCGACCTC 8717699 37 100.0 33 ..................................... CAAGAACAACGCCATCCTGGCCCGGCTGGCCAA 8717629 37 100.0 34 ..................................... CCAGAAGGGCACCGGGCCGCCCCCCAGTGGCCGC 8717558 37 100.0 34 ..................................... AAGAGGACTTGCGCACCGGGTTTCACCAGCATCA 8717487 37 100.0 33 ..................................... CTCACGAAGCAGGTGGAGTTGCCAGCGGAGGAC 8717417 37 100.0 35 ..................................... CACGTCTTGTCCGCGTCGGAGTCATCCTTGAGGAA 8717345 37 100.0 33 ..................................... CGGCCTCGGACTCACCGGCTACCGCGGCGATGG 8717275 37 100.0 36 ..................................... ACACGCTCGCCGGTCGTCCACACGACCTCGACGGTC 8717202 37 100.0 32 ..................................... TTCCACCCCAGCGTCAGGGTGAACTCGGCGCA 8717133 37 100.0 33 ..................................... TCTGCCGGGGCGGCTGGCTCGATGCCCGCCACG 8717063 37 100.0 33 ..................................... ATCCACCTGGATGGCTTGACGATGACGGACCAG 8716993 37 100.0 34 ..................................... CGCACGGGGAAGGCGCCGAAGAAGAAGCGGAGTG 8716922 37 100.0 34 ..................................... CGGTGGCAGAACGTCGCCAGTGCTGCCGTAGGCA 8716851 37 100.0 32 ..................................... ATTAACGGCAGCCTCGATGCCCTCTACGACAA 8716782 37 100.0 35 ..................................... CCAACGACGTGTTCCATCGCCAGTAGCACTTGGAC 8716710 37 100.0 35 ..................................... CCTAGGAGTGACGTGGACGTAGAAGCCGGGCCGCC 8716638 37 100.0 32 ..................................... TGACCTGTGAGGTCGGGTCGAAAGGGGGTGAT 8716569 37 100.0 33 ..................................... CGGATGGGTGACAAGTCGGGCAGCTTCTCGATT 8716499 37 100.0 32 ..................................... ATCGCGCGCTGGGGCTGGCGTGAGGCGGGCGA 8716430 37 100.0 32 ..................................... AAGCTCCTCCAGGTCCACCAGCGCTCCACCTG 8716361 37 100.0 33 ..................................... AGTGGCAGGAGTACACGCAGCCGAGTGGCGCGG 8716291 37 100.0 32 ..................................... CGCGAATGCCATGGTGGAGCGCTACGCGGACT 8716222 37 100.0 34 ..................................... CACCGCATCGAGCTCAGCCTGCAACAGGCGGTCA 8716151 37 100.0 32 ..................................... CCACGCATCTGCTCAAGTCGGGCGACGCCGAG 8716082 37 100.0 32 ..................................... CCCTCCCAGTCGTTGCGCGACGTGAACCCGTG 8716013 37 100.0 32 ..................................... CCACCTCCCATCGAGGCGAGCTGTCCAACCGC 8715944 37 100.0 33 ..................................... GAGTTCGAGAAGGCCCAGCGGACAGACGGAAAG 8715874 37 100.0 35 ..................................... GAACGCAAGCAGCCATGCGCGTTTGAACGCAAATG 8715802 37 100.0 34 ..................................... AGCTCGGCGCCGATGTAGCGGCGCCCGTGCTCCA 8715731 37 100.0 34 ..................................... ACGGTGCACTCCCTCCCCAGGTAGCGGCACCGTA 8715660 37 100.0 35 ..................................... TCCGGGTCGCTGATGGTCGTGTGCTTGCGCAGGAA 8715588 37 100.0 37 ..................................... CTGCTCACGCAGGCCGTCTATTCCCTCGACGGTTCCA 8715514 37 100.0 34 ..................................... ATTGCACGGGCCTCCCGCCCAGCTCGCCCGGCGA 8715443 37 100.0 34 ..................................... CCAGCGCTTCTCGTAGATGCCCTCGACGACACGG 8715372 37 100.0 34 ..................................... GTCACTGGCAGGGAGCCGCACTCTTTGCAGCAGT 8715301 37 100.0 34 ..................................... TCTGAACCCCGGTGCCACCGGATGGTGGAACGAG 8715230 37 100.0 35 ..................................... ATTGCCGTGATGGAAGACAACGACAGCGTGCCGCA 8715158 37 100.0 35 ..................................... GACTTGCAGGAGGCGTCCATGACGCTGCTGGCTAC 8715086 37 100.0 35 ..................................... GCGCTCCCGGTGAAGGGCAGCGTGGAGCGCACATA 8715014 37 100.0 35 ..................................... GCCTGGTGGCAGTCCAGCCAGGCCGAGAAGGAGCG 8714942 37 100.0 33 ..................................... CGCGTCCGTCAGGGCCATGGCTCAGTCCCAGAT 8714872 37 100.0 33 ..................................... ATGGAGCACCCTTCGACGAGCCTCGGGAACGCG 8714802 37 100.0 35 ..................................... AGCATCTGCGGTGAGGACGCGGCCAAGGTGGAGAC 8714730 37 100.0 37 ..................................... CTGGTAGGCGTGCTCCGAGATGTTGTGGCTGGAGGTC 8714656 37 100.0 36 ..................................... AGCCACTTGGACGTCCGAATTGACGTCCACCGCGAA 8714583 37 100.0 33 ..................................... TCGAGGTGGTGCCCGACGTCGTCAGGGTGAAGG 8714513 37 100.0 33 ..................................... CGCGGGGTGGGCGAGCTCAAGACGGCCGACGCC 8714443 37 100.0 33 ..................................... CTCCGCGCGACGGCCTGACGGCCCGCCCGTATC 8714373 37 100.0 34 ..................................... CCGAAGGAGCGCGGAAGGTGCTGCACACGAGCAA 8714302 37 100.0 33 ..................................... GGCTCCGACCAGGCGCGGCCGGCGCGCCGTCCT 8714232 37 100.0 34 ..................................... TTGGCAACGAGGGCGATGTTAGGGCGGCGCTTGA 8714161 37 100.0 35 ..................................... TGATGGGCGCGCGAAAAACGGGGCTGGGGCTGGCT 8714089 37 100.0 35 ..................................... GATGCAAAGGCGAAGCTGCCGAGTCCGGCCTTCGC 8714017 37 100.0 33 ..................................... GCGTTTGCGGGCAGCCTCCTGAAAGGCTTCCTC 8713947 37 100.0 34 ..................................... GCCCACCTCCGGCCGGATGATGTCGACCACGGCA 8713876 37 97.3 37 ................................A.... GAGTTTCCCCGCCCCATCCCCATCTACATCAGGGATT 8713802 37 100.0 39 ..................................... CAAGGTCGGGCGTCACCTGCCAGCCCATCACGCGCAACA 8713726 37 100.0 33 ..................................... CAGCGATTCGCCGTTGTGGCCCGTCTCACCCGC 8713656 37 100.0 33 ..................................... TCACCAACCGCGCCTTCGGGAAACAGCTTCTTC 8713586 37 100.0 33 ..................................... CACGCGGGGACGGTCATTGCGCATCAAGCCATT 8713516 37 100.0 35 ..................................... ACCATGGGGGAGCACCTCGCCTTGCGACGCGCCTA 8713444 37 100.0 35 ..................................... GACAGGCCCCCGGCCCCTTCCTCACCGCGAGCGGA 8713372 37 100.0 34 ..................................... CAGGACATGGAGGGGGATTGCGAGGACTTGGCTA 8713301 37 100.0 35 ..................................... GTGGCCACGTCCTCCGAGTGTTGCCCGGCGACATC 8713229 37 100.0 33 ..................................... CTCGACTCCATCACCCGGGACGTGCCCGTGTAC 8713159 37 100.0 34 ..................................... TGAGCAGCACAGCGCGGACGGAGCAGCGGCCCCT 8713088 37 100.0 33 ..................................... AAGGCGGAGCACGGGCCCATCCCGCTGGATAGT 8713018 37 100.0 33 ..................................... CGCTGGAGCCTTGACGGTGGCGCCACCTGGAGC 8712948 37 100.0 36 ..................................... TTTGTCGTGGATGGAGACGCGCTTGGGCTGCGCGTC 8712875 37 100.0 35 ..................................... AAAAACATCAGCGCGCCGAGCGCGAGCGGCGCCCA 8712803 37 100.0 32 ..................................... CGCCACGTCGTCAGCGCCGCGCTCACCGTGTC 8712734 37 100.0 37 ..................................... TCGACGCCACTGGACGCGTCCGGGTCCCGCCACAGCG 8712660 37 100.0 33 ..................................... AAGCATCGTGCTCCTCCTCGACTCGCGCCCCGC 8712590 37 100.0 35 ..................................... CGTCACGGTGGAGCGTGACGCGTCACGCTCAGGCT 8712518 37 100.0 35 ..................................... GGCGTCTCCGAGTACTCGGACCAGTGGCGGGCGGA 8712446 37 97.3 35 ...................G................. TTGAGCTGCGCAACGTCGCCCTCACCAACGACCCC 8712374 37 97.3 33 ...................G................. TGGGCTGCCCTGGCGCAGCTCTGGACCTGGGGT 8712304 37 97.3 34 ...................G................. CGCCCGCGACGGATGCACGACGCCCGTCGCACGT 8712233 37 97.3 34 ...................G................. CAGGTACCGGATGCCACGGCGCTCTGGCAGGTAC 8712162 37 97.3 32 ...................G................. AGCGACGCGAGGCTGACCGCCTTGAGGTTCTT 8712093 37 94.6 36 ...................G..C.............. GAGAAGGTTGCTGAGGTCGTGAACAAGGACGTGGAG 8712020 37 94.6 33 ...................G..........G...... GGGACGTCCGCAACTACCCCAGCCTCCAGGTTT 8711950 37 94.6 34 ...................G..........G...... GGTGCGCTAACACCAACCGGGCCCGCCCTTTTGG 8711879 37 94.6 34 .G.................G................. TCCGGAGGCTGGAAGAGGACTCAGGAGAGCGCCC 8711808 37 97.3 34 ...................G................. CCTGTACCGCCCTCGTCCACCGTATCCGTACACG 8711737 37 97.3 36 ...................G................. ACCGCGGGCAGCACCGCGAATTCCTGCGTCAAGCCG 8711664 37 97.3 36 ...................G................. CAGTCCGCGAGGACTCCTGCCATGTCGCCCGTGCGT 8711591 37 97.3 33 ...................G................. CGGAGGTCACGCAGCTCCTGCTGGAGCCGCGCA 8711521 37 97.3 33 ...................G................. TGGCTGGACACCCTCTCCATGTCCCGCGCCATC 8711451 37 97.3 33 ...................G................. CCGGACGGCCTCTTCGGGCTGATTCGGTACTTC 8711381 37 100.0 34 ..................................... CTGAACGACGAAGCCGGCGTGCTGTTTTCGAGGT 8711310 37 97.3 32 ......................G.............. TGCTGAGCAGGAATTCGAAGCGGAGCTGCGAG 8711241 37 97.3 0 ........................T............ | ========== ====== ====== ====== ===================================== ======================================= ================== 93 37 99.4 34 GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC # Left flank : TCCCTTCGCGATGCGCTGATGCGTAGATTGACCGTGTTGATTTGTTACGACGTGCGGGTGTCGGACCCACAGGGGCCTCGGCGCCTGCGCAAGATCGCGCGGGCTTGCAGAGACCATGGCGTGCGAGTGCAATACTCCGTCTTCGAGTGTGTCCTGGAGCCCAAGGACTGGGTCGTCCTGCGCGCCCGCCTGCTCGGCGCATTCGATTCGGAATGCGACAGCCTGCGCTTCTACTTCCTGTCGGAGGACGATGCCCGGAAGACGGAGCATCATGGCGCCAGAGCACCCTTGGACGTCGAGGGGCCGTTGGTCCTGTAGGCCTCCGCGAACCGGCCCCGGTGTGCGCTCCGTCGAGGGTTCGCGCTCTTTGAAATCCCGAATAGAATCATGGAGTTGGGGGAGTGGGCGTCAGGAACGGCGAGGCGCTTTCGTGGCCCCGCGGGCCGGTTCGCGAAGTTCGGCCGGGTTCCGTAGTCAGAACGGTATGTTGGAAGGGCAGA # Right flank : ACGGGGCTGTACCTCCACCCCGTGGCACGCTTGCCGCTCCTCGTGAACGTGAGTGGTTCGAGGTCTTCGGGGATGGCCGTTCCAAGCGCAACGGCTCGTCTCTATCCAAAGCGAACGTGGCCAACGCCCATCGGCTCACGACGTCGCTCATCGCCGCGAGTCGGCTGAACGAATACAAGGAGGATGGCAGCGCCCCTTCCCCCTTAGCACATGACCGGCAGGTGACGATGTCCGAATCCACCGTAGACGGTCGGCGCACGCGTCTGACGTTGGGCAGCGACACGCCGCCCGACATCCTCCGCTTCATGCAGCAGGTGGCTGCCGCTTACGGCATCGAGCTTTGAGCGCGAGGACCTCGGGCGCCCCAGGGCTGGAGGAACACCTCCGTCTCCTCCAGGATCCGCGGCAGTGACGCGGTGAGCTCGTGGCCATCGTCCACCTCCACCAGCCGGACGTGGCGCTTGCCCTCCGCCCACTGGCGCGAGTTTTGGACGTCACAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.50,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //