Array 1 1830759-1833962 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022058.2 Chryseobacterium indologenes strain FDAARGOS_337 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 1830759 47 83.0 30 A.CT.AT..CAT................................... CATTTTAATGCTTACAGAATCGTCTGATAA T [1830768] 1830837 47 100.0 30 ............................................... AATTCGTGCAATTCCTTCTCTTGCATTAGA 1830914 47 100.0 30 ............................................... ATTGATGGATAAAGTTCTCCTTCTGCTTCC 1830991 47 100.0 30 ............................................... TGTTAATGAAGCAATTGCGCAATCTAATGT 1831068 47 100.0 30 ............................................... AATTCGTGCAATTCCTTCTCTTGCATTAGA 1831145 47 100.0 30 ............................................... ATTGATGGATAAAGTTCTCCTTCTGCTTCC 1831222 47 100.0 30 ............................................... TGTTAATGAAGCAATTGCGCAATCTAATGT 1831299 47 100.0 30 ............................................... AGGTAATGCTTGAATATCTGTAACTTTACT 1831376 47 100.0 30 ............................................... CATGATACATTAGAACATTGTGGTTTATCA 1831453 47 100.0 30 ............................................... GGTTTATTAATTTCATAGCCCAAAGACCCA 1831530 47 100.0 29 ............................................... AAAATTTCACGTTCATTAATCATGATATT 1831606 47 100.0 30 ............................................... ATTGATGGATAAAGTTCTCCTTCTGCTTCC 1831683 47 100.0 30 ............................................... TGTTAATGAAGCAATTGCGCAATCTAATGT 1831760 47 100.0 30 ............................................... CTTCTAAACGCTCGATTAGTGGCTGAACAA 1831837 47 100.0 30 ............................................... CAGTAAAAACTGAATCATACAGATGATAAG 1831914 47 100.0 30 ............................................... GCATGATTAGACATTGTTTACACCTCGAAA 1831991 47 100.0 30 ............................................... AATAAGACAGAATACAACTTCTGGCGACCC 1832068 47 100.0 30 ............................................... TTCGGTTATTATCGCAATATCTTTACTTGT 1832145 47 100.0 30 ............................................... TTCGGTTATTATCGCAATATCTTTACTTGT 1832222 47 100.0 30 ............................................... TTGCGTAGATTGAATCATGTGCGTCATGGT 1832299 47 100.0 30 ............................................... GGTTAATCGCTCAATTACTGCGGCAGAAAA 1832376 47 100.0 30 ............................................... ATCTCGTGCGCTATGGTTCCTTCACGTGCG 1832453 47 100.0 30 ............................................... TTAGTTGCAATATATATCTTTGCAATGCAG 1832530 47 100.0 30 ............................................... CCAGCTTGCCACATTCACTAAGCCGACAAT 1832607 47 100.0 30 ............................................... CTTATCAAGGTGTCCTGATATTACATAATA 1832684 47 100.0 30 ............................................... TTTGGGATCGTAGTCTTTATAAAGCCGCCA 1832761 47 100.0 30 ............................................... TTTTCTTTTTGGCCACCCAGCATCTGGCAA 1832838 47 100.0 30 ............................................... AGTATTAGGCAAAGGATTACTTACGAAAGC 1832915 47 100.0 30 ............................................... GGTTGCCCGTCAAAAGGTGATCACTTATTT 1832992 47 100.0 30 ............................................... TCGCATTTGTTCAACTGTTTCATTTTCATA 1833069 47 100.0 30 ............................................... ATTTTCTGGAGATTCAATCATATACGCTTC 1833146 47 100.0 30 ............................................... AGAGATGTGGAAAGCTTTACAAAATGGATG 1833223 47 100.0 30 ............................................... ATAGCAATTACCTTAGCCATTGTATCTATA 1833300 47 100.0 30 ............................................... GCTATAGGATCTGCTGCTAATCCTTTGTTA 1833377 47 100.0 30 ............................................... AATCTTACTACCCGTATAGATGGCTATTGC 1833454 47 100.0 30 ............................................... TATATTTTATTAAACATGTGCATTCTAGCA 1833531 47 100.0 30 ............................................... CGTTACCAAATGTGTACGTTAAACTGGATG 1833608 47 100.0 30 ............................................... ATGCAGATAGATCTGCCTTAGATCTTAGTT 1833685 47 100.0 30 ............................................... GTAGTTTCCTCTTTAGCCGTCTCAGTTCCT 1833762 47 100.0 30 ............................................... GAATGGTATAAAAGTCAGTACGAGCTGTTA 1833839 47 100.0 30 ............................................... GGAATTTTTTGATAATTGTGGGTTTGGAGG 1833916 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 42 47 99.6 30 GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Left flank : AAGGTGTGTTTCAAGGTCAGCCGGTTTTTTGTCTTTTTCAGTTACGGAAGCCGGATCAACTTTAATAGAAGTCATATCGATAGTAAAGCTTCCTGCTACAAGCTGCCCACCTTCAATATTCAGGTCGCCTGATTTTATGTTTAAGGTACCCCAACGAGGTGCAAAACCTCCTTTGTGGAAAGCTTTCCAGTTTACTACAGAAGTTACCGTATCTACTGCTAATGCTTCTCCTTTTCCTTCAGCAACAGACTGTTCAGTAGCTACTGCTGTATCGGTTGTTTTTTCTTTATTGTTACATGATACTGCCAGTAATCCTACTGCTACCAATGCAATTACGCTAATTTTTTTCATATTGAACTGTTTAAATAAGTTTGTTGAAATCTTTGTTGTTTTCGGTTACAAAAATAGAAAAACATTATTATTGACATCTTATCATATATCAAGAAATGCGATAAGACAGTTTATTTGAACTTATGAATAAAAATAATGTGATACTTAGA # Right flank : CCTCAAAAAACAATCCACTGAAAATCAGTAGATTGTTTTTGTTTTTTAGGATTTTAAATTTAGAATAATTCAAGCTGTTGAAAAGTTGGAGGAGGTTCTTCTTTATTTCTGGCAAAAAATATTTCAATATCTCCAAATTGTTTATCCGTAATACACATAATAGCAACTTTTCCAGCTTTTGGAAGCATAAATTTCACTCTTTTAATATGAACCTCAGCATTTTCACGACTTGGACAATGCCTTACATACATTGAAAACTGAAATAACGTAAAACCATCATCAAGCAAAGATTTACGAAACCGGTTCGCATCTTTCATGTTAGCTTTAGTTTCTGTTGGCAAATCGTATAATACTAAAACCCACATAATTCGATAAGCATTAAACCTTTCGGCATTCATATCAATTTAGGATAAGAGATCAATCGTTTTTCACCTGTATAGCATTTATATAGAGACATGGCTGTTGTTTTTACTGCAATCAATAATGGTCTGATTTTATCA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //