Array 1 87298-88122 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRHH01000008.1 [Ruminococcus] gnavus strain AM25-19 AM25-19.Scaf8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 87298 36 100.0 30 .................................... TAAATTCCGGTTGCCAGAAGGGATGATCCT 87364 36 100.0 30 .................................... TAAATCCGGATGCTTGGCCATCTCTTCGAT 87430 36 100.0 30 .................................... AAGTTGAAAAAGTTGAAAAACAGCCAAAAG 87496 36 100.0 30 .................................... ATCATACAGTTCCATATTCCCCTTAGTGAC 87562 36 100.0 30 .................................... AGTGACGCTTGCATCAGCAACAAATGGGTC 87628 36 100.0 30 .................................... GTTAGTAAGGGTTAAACCTTTGCTATAAAT 87694 36 100.0 30 .................................... GTAGAAGCAAAGGAGGACATGAAGATAGAT 87760 36 100.0 29 .................................... AAAGAATTACAAATGCCAACAAAAACCAA 87825 36 100.0 30 .................................... TTAATGTTTCTTCATGCATGGAGTAGATAA 87891 36 100.0 30 .................................... GAACGGGAAAACAGAACTGTTTGCACAGTA 87957 36 100.0 29 .................................... AGAAAAAAGGAGGAAACTTTGCAGTAGTC 88022 36 100.0 29 .................................... TTAATATTAATGGGAAACGTAGATGGTGG 88087 36 91.7 0 .................................TTA | ========== ====== ====== ====== ==================================== ============================== ================== 13 36 99.4 30 GTTTGAGAGTAGTGTAAATCTATAGGGTAATGAAAC # Left flank : AAATGAATAGTAGGACAATAATAAAAAAAGTATTAGTAGCTATGGAAAAGTGTGGTCAGGATGCGGTATACTATGAAAGAACACAAAAATTGATGGCTGAAATTGAGACATATATTAATGATTTGAGCCTTAATTTTGATACAGAAATAGAGTGCCATGATATTTCTTTTCAACAGATACTTAAAGCAGCAGAACTGACTGTGGCAGATGAATATTCTAGGCTTGTGGATAAAATTTATGCGTATATGGAGTTAATACGTGAGTTTGAAGGAGATAAGCTGTTTATTTTTGTCAATTTGAGTAGTTATATTGGAAATGAACAATTGCAAGAATTTGTAAATACTGTGATTGGGCATTCTTTTCGAGTGTTATTAATTGATAGTCACGATTTTGAAAGATTAGAAAAAGAAAATCGTTTGATTGTTGATTGCGATTTGTGTGAGTTTTGAATAGACCCTATGGATTTCACAGCGATAGCAGGTCGTTTTCTCAAATTTGAG # Right flank : ATGAAAAAGAACTTCGTGTGCACGATTGGATTTGTCGGAATATTGAATATGATTATGAAGGAAGCGATAAGAATAAACTATCCAGAGTGATTGCTTCACACAATATTCTTGGTGTTTTTGCACATCATAAAGCTCAATGTGAGGGAATTGCTAAAGCAGTAAAGGTTCTTTTGAACGCAGTTGATGTGAAGTGTATCGTTGCAACCGGTGATTCAATAAAAAGCGGACAGTGTGTGCCTCATGCATGGAATATTGTGGATATTGATGGAGAGCCGTATCAGTTAGATGTTACCTGGGATATAAGTACAACAGGGCAGAATAAGCAGTTCGTGGTATATGATTACTTTAATCTGACAGATGAGTTAATGAATCAGGATCACAAAGCAGATAGTAGCTTACCGATATGTAGAAGCAAGAAAGCGAATTATTATGTGCAGAGAGGCTGTTCTTTTCAGATGCGGCACCGGCTTATGGCATATATAGACAGGTTGATTGCGAAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGTAGTGTAAATCTATAGGGTAATGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //