Array 1 102879-100652 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJD01000011.1 Brevibacterium ravenspurgense 5401308 = CCUG 53855 strain 5401308, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 102878 29 100.0 32 ............................. TCCGGTCTCGTCACCACCCTTGCCGTCGTCCT 102817 29 100.0 32 ............................. GATTCGATAGCGTCAATGGCTGTCTTGTCTGG 102756 29 100.0 32 ............................. GAGCGCGCAGCGCCCGCACTCTCATTGACTCA 102695 29 100.0 32 ............................. AAGCTCGACGGTCTGACCGCGACAGCGACCTT 102634 29 100.0 33 ............................. TGGACACGCGACACCATCGCCATCATCAAACAC 102572 29 100.0 32 ............................. TAGACATGCTGCTGTTGCGACTGTCACCAGCT 102511 29 100.0 32 ............................. GCCTGATCAGCAACTGTGACGGTTCACGAGAA 102450 29 96.6 32 ............................G TAGATGGTGTCTCCGGTGTCCGTCTTCGGGAC 102389 29 100.0 32 ............................. CAGTCCCAGGTGGCACTGAGGGTGCGGGAGTT 102328 29 100.0 32 ............................. TTCTCGCCATCATCGAGGTGGGAGACGACATG 102267 29 100.0 32 ............................. GACCCAGACTTCTTCGCTACCGAACCGGCAAA 102206 29 100.0 32 ............................. CAGCAGCTCATCAGTTTCTTCGTCCAGGAACA 102145 29 100.0 32 ............................. AAACCCCAAATGGTGACCAATCCGACCAGAAG 102084 29 100.0 32 ............................. TACACACTCGAATTTCCTGTCACCGATGGGGA 102023 29 100.0 32 ............................. AACGGCGGTATTGCCATGATGGACAGCCTTTC 101962 29 100.0 32 ............................. CGACCAGGCTGGTGGTGGCGACCTTGACCGGG 101901 29 100.0 32 ............................. AACGGCGGTATTGCCATGATGGACAGCCTTTC 101840 29 100.0 32 ............................. TGCTCACCAAACGACAGAAGTACAACCAGAAA 101779 29 100.0 32 ............................. CATGACGCAATGCGATTGCTGCTGGACCGTGA 101718 29 100.0 33 ............................. CGTATCGGGCAGATCGTAACCGAGGGCTTCCAC 101656 29 100.0 32 ............................. GACTTTCTGCCGCTGGATTCTCACCGGGCCGC 101595 29 100.0 32 ............................. TCAACCACGCCCCCGGAGGTGTGGCATGAGCG 101534 29 100.0 32 ............................. AAAGGATGCCTAAGTCGCTCGCAGACGGCCGC 101473 29 100.0 32 ............................. GCTTCGACCGGCGCGGCCACGTCGCGTTTACT 101412 29 100.0 32 ............................. CGATCAGTCGTCTGTGCGGCTGGTGTATGTGC 101351 29 100.0 32 ............................. GCCAACCGCTCCACCGCCTGGTACCTGCTGCC 101290 29 100.0 32 ............................. ATACAGCGGGGCCGCCCGGTCTAGTGGTGCTT 101229 29 96.6 32 .................A........... GCGGTGCCCTTCACAGCGTTGAGAGCGTTCGT 101168 29 100.0 32 ............................. GGGCTACCACAGCCAGTTCCCGGCCGGCCCTC 101107 29 100.0 32 ............................. TGCTGGACATGTCTAGCCGGAAGATTGCTGAG 101046 29 100.0 32 ............................. GCTTCACGCCGGAACGCATCATCACCCACAAG 100985 29 100.0 32 ............................. CACACAGTGTCGTCACCAAAGCTTCCGTCTTC 100924 29 100.0 32 ............................. TGAGACCGGGCGGGAACTGTGGGGCAAGTTCG 100863 29 96.6 32 .............G............... GCTGAGGGCGGCGTGAAGCATCCAAGCCGGGC 100802 29 96.6 32 ............................A TCATCCAAATTTGGGCGGCGCCGCCTAGCGTA 100741 29 100.0 32 ............................. CGGCAGATCGTGGCTCCGGTGGCGAAATTCGC 100680 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 37 29 99.6 32 GTGTTCCCCACGCAGGTGGGGATGAGCCC # Left flank : ACCTCGATGAGCTGTCAGTGTGGGCAGGCCGGGGCGAGCGACGGCTTACAAGCGGGTTTAATCGTGCGGATCACGGATCATGGTCATCGTAGTCTTGTCGAGCTGCCCCGCTGGCCTACGGGGAGACGTCACCAAGTGGCTTGTTGAAATCTCTGCGGGCGTGTTCGTTGGAAAGCTCAGTGCCCGTCTCAGGGAGTTGCTTTGGGAACGCATTGATGCAGCATCATCTACAGGTCAGGCCCTTATGATCTGGTCAACCAACAACGAACAAGCCTTTGACTACCGGGTCAAGGAGCACAGGTGGGAACCCGTTGACCTCGACGGCATCACATTGATGAGACGACCAGCAGCACAGTCTGGATACGGAAATACAACCCTAAAAGCAGGCTGGAGCAAAGCAAGAGCTATGAGGAATGCACATAAATTCGGAAACAAGCGGAAAAGCCCTTAAAGTGATCTAAAACTAGCTTGCAAGCCAGTGTTTGCACTGGTCAGCAAGA # Right flank : TGTCCAACCGGTATACCGCACGGGCGGACGGTGGGCGAGACAGCTCTGGGTCCCCTATGGATGGGGAAGGTTATCGGGTGGCTTGATCTGGAGAGTTTTGAACGACAGATAGAATTGGCCTATGCGCCTTCCCGCCACCACGCTGAGAATCGCAGGGGCTGTTTGCTCAGTCGCGCTGCTGGTCGGTTGTACTCCAGAGCCGAACGGGCCGCCTATCGGAGGTCCCGACTCCACCGAGGAGCGGACATACTCCCGCCCCACACCATCGGTGCCACCCCAGAGGACACCGCAAGAGGGCTGCCCATATTCTGCAGGTGATCGCGACAAATCCTTCCCGATGCAGACATCACTGGGACCTGTCGCACACCAGGTGATCCCGGTCTTCGCGGAGGAGCCCGACTGGGAAAACATCGGATATGGCTTGAATGAGAGCGCACATTCCGGAGATGAGGGCATGGACCCGCACAAGCTGCTTCTCATCGTTGTGCGCGACCCTCAGG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGCAGGTGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGCAGGTGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.20,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //