Array 1 128968-126075 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFIRE010000003.1 Mycoplasma sp. CSL10137 NODE_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 128967 36 100.0 30 .................................... ACGTTAGACAACCCAAAAATAGAATTATTT 128901 36 100.0 30 .................................... TGTTGTTTTGTCTGTAGTTTATATAACTTG 128835 36 100.0 31 .................................... TTCAATAATTGAAGGACAGAACATAAATATA 128768 36 100.0 30 .................................... GAATGTTTTGTGATTATAAAAATTATGATT 128702 36 100.0 30 .................................... AATGGTATAAAAGTTAAAGTAGATGATTAT 128636 36 100.0 30 .................................... TATACTCCTGTTCTGTTATTCATTTTAAAT 128570 36 100.0 30 .................................... GAATGTTTTGTGATTATAAAAATTATGATT 128504 36 100.0 30 .................................... TAAATTATTCTTTTAGGAACTGCAAATCCA 128438 36 100.0 30 .................................... TCTTTAAAGCCTGTTCTATGATCAACGTTT 128372 36 100.0 30 .................................... ATATGAACTAGGATCATTTATATCTTTAAC 128306 36 100.0 30 .................................... TAGAATTAAATACTAGTTTTCATAAAACCA 128240 36 100.0 31 .................................... AGAGCATCTAATAAAAACAAAAACTTTAATA 128173 36 100.0 32 .................................... TATGACTTTTTGACATCAATTCTAAAAATTGA 128105 36 100.0 31 .................................... AAGTGTCTGTGAATAGTTCAAGGGTTTCTCT 128038 36 100.0 30 .................................... TGGGGTTGATAATGATATCTCAGAAGTTGA 127972 36 100.0 30 .................................... TGAGTGAAAGCCGTTTTTTCAATTTATTTT 127906 36 100.0 30 .................................... ATACGAATAAAACAATAGACTCAAATGAGT 127840 36 100.0 30 .................................... ATATACTCAAATATTTTTTAAACTTTCAAC 127774 36 100.0 30 .................................... AGTCAAGAATCCGTTGTTTAAATTTGAAGT 127708 36 100.0 31 .................................... AATATCATTTAAATTTATTATAATTTTGTTT 127641 36 100.0 30 .................................... TGTATTAATAAAAAGGAGTCAATAATGGCA 127575 36 100.0 30 .................................... ATTGGAGTATATAAAAACAAATATGAACGT 127509 36 100.0 30 .................................... TTGGAAAATTAACGTTTTTTATTTCTTTTC 127443 36 100.0 30 .................................... GTTTGACTTGTTTGAATTGGCCCATTTCTT 127377 36 100.0 30 .................................... TCCTTCAAGTTTTCCTAAAAATGAAAACAA 127311 36 97.2 32 .C.................................. ATGTAGAATTATATAACAACCCATTTTGATTT 127243 36 100.0 30 .................................... TTCTGATACATTCTGTTTAAATATTCTTCA CG [127216] 127175 36 100.0 30 .................................... TTCTGATACATTCTGTTTAAATATTCTTCA 127109 36 100.0 30 .................................... TTATTCATTTTTATTATCATTCTTTTATTT 127043 36 100.0 30 .................................... TTGTTTATCTGTCGCATTCTTTTTATACTT 126977 36 100.0 30 .................................... ATATAAAAACGACTTAGGGTCAGACTTTAG 126911 36 100.0 31 .................................... ACATTTTCTGTTTTTTGTTCTTGTTCGTTGT 126844 36 100.0 30 .................................... GCACGCTTTAATATAGTTATAAACTCGTTA 126778 36 100.0 30 .................................... ATAAAACCTGCTAATGAGTTAGAAATATCA 126712 36 100.0 30 .................................... TAAAATAGAATTAAAAAATGAAAATTTTAT 126646 36 100.0 30 .................................... GTTTTCTAACTCAATACTTTTTTTAATTCT 126580 36 100.0 30 .................................... TTAGTTTCTAATTCATCAATATTTAAATTT 126514 36 100.0 30 .................................... TCTGTTTTTGTTTGGTTGAGTTCTGCAACT 126448 36 100.0 30 .................................... CCTGCAATTGGATAATTTGTATTAAAATTA 126382 36 100.0 30 .................................... CTGTTTTCATTTGATTTTAAGTTTGTTATA 126316 36 100.0 30 .................................... AGATACACAAATAATAAACGAAAATTCATT 126250 36 100.0 31 .................................... TATTGATTATAGCGGCAATTATTGATTATAC ACGCAC [126216] 126177 36 100.0 31 .................................... TATTGATTATAGCGGCAATTATTGATTATAC 126110 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================ ================== 44 36 99.9 30 GTGTTGTATTGCTTAAAAATAGTATAGCACTAAAGT # Left flank : AAGCAACTACTTATTTAGAAACAGAATATGCTAAATTAAATCAAAAATAGTAAAATAAATCATACTTATTAAAAAGTATATCCTAAAAGAAATACCAAGCGCGACACTTTCGTGCTTGGTATTTTTATTATGTCTTAATGATTTAAAAATCAATATTGTTACTTTTTTCAAAAAAATAAAAAATTTGCTTCTTTAGTTTTAAAGAAATCCACACTTCGATAAAAAGTTGTTTTAAAATTTTTGTTACATTTTTTATTGCTTAAACCTTAAACTAAACTTTCAAAAGTAAAGATTTTAAAAGAATTTTTTCATTTTAAAATTCCTTTGGCATATTGTCTGTTTTAGAAACATTTTCTTGTAAATAACCAAAATTTATAGAGTTAAGTCAAAACATTTTTTAAATTTTCTACGTATAAGTCTATTTTAATTTTCTATTGATCCATGTTAGAATGATGCATAAGTTTTGCAGTATATCTATAACAGTTTAGAGTCTTGAAATA # Right flank : GTCAAATTTAATAAAAAATATAAAAATTGTCCTAATTAATGTTATTTAGCAACTCAATTATTAAAAGATTATCATTTTTTAGGATGCCAAAACTTTCGTCATAATTAAGTTGAAAATTATTAATTTTATTTTCAATTCAAGTATGTAAAGGTAAATACGAATCTATTAGCGTTAAATTTCTGTTGTTTTCTAATGAACATATTTCTAATTCTTCATAATCATCAACCAAATCAAATAAATCATTATTAATTATTAATATATTGAATTTATTTATATATTTTTCTAGTTTATTTATTTTAATAAAACTTAAATCCTTTAAAATAACAAAAGGTTTATTAGTTGAATCATAGTTGTCCATCCATTTTGAAAGAGTTTTTTCATCAACAAAAATACTATCATTTAATGAAATTAACGATTTTAAAATTTTAATTTTATCGAAATTCAAATCTAATAAGTTTTCTCCTAATAGAGTGTTAATTAGATCTAAAGAATTTAAAAAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTGTATTGCTTAAAAATAGTATAGCACTAAAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.70,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //