Array 1 23188-21897 **** Predicted by CRISPRDetect 2.4 *** >NZ_JHWY01000015.1 Lachnospira multipara MC2003 T520DRAFT_scaffold00011.11_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 23187 36 100.0 30 .................................... AAAAAATTGAAGATTTAATCTCTCATGCTG 23121 36 100.0 30 .................................... GCGGATGTGCTACAGAAAGTTATCCATGTA 23055 36 100.0 30 .................................... ATTGTGGTAGCAATGAAATCTTAGAATTAG 22989 36 100.0 30 .................................... AAACGGCATTAAAGACAATGGCATTGTGCG 22923 36 100.0 30 .................................... TAGTTATAGACTTTGATATTAAAGGACCTA 22857 36 100.0 30 .................................... CTTATGTCAGATGTTTAATAGTATCGTCGG 22791 36 100.0 30 .................................... AATCTAATTCATTTACAGATATGTTTGATA 22725 36 100.0 30 .................................... ACGGCTTTATGCTACGCGGCTCTTTCACTT 22659 36 100.0 30 .................................... GAATTGAAGTTATAAGAGTACCATTGCCTA 22593 36 100.0 30 .................................... TCGACTTGGCTCGTAAGAGATTACAACAGT 22527 36 97.2 30 ......A............................. AAGCGTTAGAGGTTTCTGCTCTACTCCTGA 22461 36 100.0 30 .................................... ATATTCCAGAAGCTAAAGACGTTGTTAACT 22395 36 100.0 30 .................................... TAACATTGGAATATATTCATAAACATTCAA 22329 36 100.0 31 .................................... ACAAGCGGTAAAATTGCAGGATATACAATTA 22262 36 100.0 30 .................................... ATCAGAAGATTTCTATTGTGCAGATGGGGA 22196 36 100.0 30 .................................... ACTTTACCTTTACTCTTACACTAGCCTTTA 22130 36 100.0 30 .................................... TACTATGAATTATCAATCGTTAACAGCAAG 22064 36 100.0 30 .................................... CAATTAAGAATTGCTTAATATTATACAAGG 21998 36 100.0 30 .................................... TTAGAAAAGAGGATGTCGTTGCCAGATACG 21932 36 75.0 0 ..................CC...T..A.G.AT..TA | ========== ====== ====== ====== ==================================== =============================== ================== 20 36 98.6 30 GTTTGAGAGTAGTGTAATTTCATATGGTAACCAAAC # Left flank : AATTTCTTTTTAATAAGCTTATAGAAGAATTACAGATTAATGAATTACAAGAAAAAATAGCACAAGATTACGAAGATTTGATTCAATTAGTAGAGGATTTAGGTAACAAATCTATGTTTAATATTGAGCTAGAGGAAGAATTAGAATATATAGACGTATTTAAATTTTTACGTGTTGAATTAGAACAACCAAAAGGAAATTTTTTGGAAAAACTATTAGATTATATGAAGATAGAGATGGAATTAATGAATAAAAAAATCTTTTTTGTTGTAAATTGTGCTGCATATATGGAAAATAATTGGTATAATGAAATACGGAATTGGTGCGATTATCAAGAAGTTATTGTAGTCTTTATAGAAAATCAACAAACATCTATAGGATACGATCTAAATGAATATATTTTAGACCGTGATTTATGTATAATCCACTAATTATACTATATGATATTACACCATGTTGTAGTGGACATGAATTCAAATCACAATATGTATAAAATTGAG # Right flank : ATGAAAAAGGTAATAATGAAAAAGGATTATCCAAAAGACATTAAGTCTAGGATAATCCTTTTATTTAAATCAATATTGCTTCATGCTTGTTAGTTGTCGAATCGGATTTAAAAGAAATCTTTTTATAACAGTAAACAAAGTATGCAACTTCAGCAACACCTGTAATTATAAATGAGAATGGGTAGAGTAAATAAAGGGAAGGAATGCTTCCTATAAGTGCAAATACTGTCTTTACCCATAAAACTCTAAATACGCAAGAGCCCATTATAACAATAAAAGTTGGCCATGCACTTTTATGTAGGGCGCGGCTTGCAGCAATTGATACATCCATTAATGCTGAAATAAAATAAGATGCAGCCATAAGATTAAGTCTTTTTAGACCAGCATTTATTACATTTGTCTCATTGGAAAAAAGAGACAAGAATTCTTTACCAAAGAATAATAGGGCAATTCCCATAATCAAACCTAAGGTCATTGATGAGAATAGGGCTGTTAAGTAG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGTAGTGTAATTTCATATGGTAACCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //