Array 1 200485-202099 **** Predicted by CRISPRDetect 2.4 *** >NZ_NWAC01000002.1 Escherichia coli strain T097 T097_NODE_2_length_325528_cov_84.8451_pilon, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 200485 29 100.0 32 ............................. GCATTGACGCTTTAAACGACGACGGACGCCAC 200546 29 100.0 32 ............................. AAAACAGCCTTTAGATTAGTACCTGACGACCG 200607 29 100.0 32 ............................. TAAACGCACCTGGCGCGCCACTTTATCAACAA 200668 29 100.0 32 ............................. CGGCTTGTTTAATTGCGTGGAACGTCTCAATT 200729 29 100.0 32 ............................. ACGGCGTGGATTGAGGGACGGGTATTTGGTCC 200790 29 96.6 32 ............................T AGATCGCGCCACGAGGAAACGAATATGAACGG 200851 29 100.0 32 ............................. TGCCGCCAGGCCAGCGACACATCAGACAACTG 200912 29 100.0 32 ............................. GTCTGTGATGGCCTGCTCGTGAGTCCGCGGCG 200973 29 100.0 32 ............................. TGCGCCGTAGCGTGTCCACCTATTGTAGTAAA 201034 29 100.0 32 ............................. ATACAAACGCGGTGTTTATCAATATGAATTTT 201095 29 100.0 32 ............................. GCACCACGCGTACCCCGATGTTTGTTTTGCCA 201156 29 100.0 32 ............................. ATCCGGCTATATCTTTGAGCATTACAGAAATA 201217 29 100.0 32 ............................. CTATTGCTTTCGTACAGATTTTCAGTGGTGCT 201278 29 100.0 32 ............................. AAAATTCTGTGTTTCGACCATTACTTCGGTAA 201339 29 100.0 32 ............................. ATTCTTGATCACGCTTTTACCGAAGTAATGGT 201400 29 100.0 32 ............................. GGGGTAGAATTATTCTTCGTGAGCGATTTATC 201461 29 100.0 32 ............................. CGGCGTTCCGTGCGGCAATTGGAATCACACCA 201522 29 100.0 32 ............................. CGTTCTGAATCCGATATTCTTCAGCACCTTCA 201583 29 100.0 32 ............................. AGCGTCAATCAGCGCGTCTATCGCGTCACTTT 201644 29 100.0 32 ............................. ATTTGGGGGTATGAGAGCGCCGAGCCGTTCGG 201705 29 100.0 32 ............................. GCTCCCTGTCAGTTGTAATCGATAACGTTGAT 201766 29 100.0 32 ............................. ATGTAGGGGCAATCGAACGATTCTCTGCCGAC 201827 29 100.0 32 ............................. CCTAGCCCGATTATCGGCATGAGCGATGCGGA 201888 29 100.0 32 ............................. TCGAAGAAGAAAGGGAAATAATGCGAGGAACG 201949 29 100.0 32 ............................. TATTACGCGCCAGCAATGCTGACAGCGGCAAA 202010 29 100.0 32 ............................. CGCGAGAGCCAGCAAAACGCCAGGGCACAAAA 202071 29 93.1 0 .A..........................A | ========== ====== ====== ====== ============================= ================================ ================== 27 29 99.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTATTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTACTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : ACCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACCCCTCATGTTCAAAATAGTTCTCCATGCCAGAGAAGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTGTTTTTTTAATGTTGAATTAATATCTATTAATTTTTTCTTTAGGTTAATAGTTTGTTTTTTAAGCTTGTTATTCATTGATTAAGTAATAAATCTGAAAATTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATTACCGTTTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //