Array 1 41429-40455 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVXL01000006.1 Moorella stamsii strain DSM 26217 MOST_contig000006, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 41428 37 100.0 34 ..................................... GTTTTCGATTTAAACATGCCGCAGGACCGGGCGA 41357 37 100.0 35 ..................................... TCCTGTACCAGGGCCTTTGTCTGCTCAGCCCGTTC 41285 37 100.0 37 ..................................... ATGATCTAAGCCGTTATCAGACCAGGCCCTCTTTGGG 41211 37 100.0 36 ..................................... TTCGCCTGGTTTGGTGCTACCTCAAGCCAGGGCACC 41138 37 100.0 34 ..................................... CGCCCGGCTTGCTCCACGGTACGGCGGTCTATCC 41067 37 100.0 35 ..................................... CACAGAAGCTTTTGGTTGTAGCCGCCACTCTCGAT 40995 37 100.0 35 ..................................... ACCCTTGAGCGGGCAGAAAGCCTGGGCGTTCCTGC 40923 37 100.0 34 ..................................... GTTTTCGATTTAAACATGCCGCAGGACCGGGCGA 40852 37 100.0 35 ..................................... CACAGAAGCTTTTGGTTGTAGCCGCCACTCTCGAT 40780 37 100.0 35 ..................................... ACCCTTGAGCGGGCAGAAAGCCTGGGCGTTCCTGC 40708 37 100.0 34 ..................................... GTTTTCGATTTAAACATGCCGCAGGACCGGGCGA 40637 37 100.0 34 ..................................... TGCCGGGTTTCGGGCCGGGCTCCCGGCAAGACAA 40566 37 100.0 35 ..................................... TGCCGCGTAGAATATATACCCGCAAAGGTCGATCC 40494 37 91.9 0 ............................A.AA..... | CG,C [40458,40469] ========== ====== ====== ====== ===================================== ===================================== ================== 14 37 99.4 35 GTTGCGCCCGGCTCCCATGCCGGGCGAGGATTGAAAC # Left flank : GCTGGGCGAAGGTTGAAACTTAAGTGTGGTGCAGGTAACATGTATATCCTAATAACTTATGATGTTTCTACAGAATCAGAAGCAGGTAAAAAACGCCTGCGTAAAGTTGCCCAGGTTTGTAAAGATTTTGGCCAGCGGGTGCAAAAGTCCGTTTTTGAGTGTTCGGTCAACGAAGCTCAGTTTGAACAGTTAAAGCACCGGCTCTTGCAGTGTATCGATGAAAAAAGCGATAGCCTGCGGATTTACCGGTTACGCGAACCCCCAAAAAAATACATCCAGGAGTATGGCGTCAACCTAACGATTGATTTTGACGCCCCCCTGGTTTTGTAAACCCGCGAACATATAGCAAGGGGTAAAAGACCGGAAGGTTCGCGATCTTTGGGAATCAAGGCCTGAAGCTAATTTTAGAGGTGAAGCATAATGGAGTATTCTAATTCAGTCATCAGGTTCGCGCAGAATAGTAATATAGGGGTTGTCTGCCAAGGGTTTTAGCGCGAACT # Right flank : CCATTTCGCTGGATGCAAGAATTAACGATACCAAAAGAAGCCAGGGTTGGGTAAGTTGATGTGGGAGAAATGAACATGATAAAAGCATTTGAAACAATAATAAATCCTAAACCGGCGCAATGACAAATATAGCTTTCACTCGCGCCTCCTCCCGCCACACTTCTATATACAATCTCTCATTAGCGTCATGGCCGGCGTCCAGCACCGTAACCACCCGGGCAGAAAATACCTCGCCGGCGGCATAGCGAGCGGTAAGAATGGCAGCCAGCCCGGAACGGAGGTAACCAAGCTGAGCACCCCAGGGTGAAAGGACGGCGACAGCATGGGGGTCGTGCTTGTTTCCCGGTTCCAATGCCAGGAAGACCGGCATCCCGCCCTGGAGCTTATCAACTTCCTGCAGGCGCTCCCCATAGCGCAGACCTACGACGCGGGTGATGAATCGCCCTGCAGTAGCAAAATATTGTTGCACCTCCAGGCCCGCCGGGCCTAAAATGCTCCCC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGCCCGGCTCCCATGCCGGGCGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCGGCTTCCATGCCGGGCGAGGGTTGAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-16.30,-17.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 513-2198 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVXL01000056.1 Moorella stamsii strain DSM 26217 MOST_contig000056, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 513 30 100.0 38 .............................. CGGCATTATGTCGGTCGAAATGCAGAAGGCCTACATTG 581 30 100.0 36 .............................. TGTATAAAGACGTAGAGCAGGGCCGTTGGAGTGCGG 647 30 100.0 36 .............................. TACTGCATTGAATGGTTCTCCCTTCGCATTCTCTTT 713 30 100.0 38 .............................. CCACGCGGCTAAGATAGGCAGGCCCGTAGCGTTTTTTA 781 30 100.0 35 .............................. GGTTCAGAGGGGGTGAACTTGGATGCACAAACTTG 846 30 100.0 36 .............................. CTCGTAAACTGGATTCAACAAACCATGTTTAGCGCA 912 30 100.0 37 .............................. CCATTATATGCGCGTGCGTGCAGGCGAGATAGACTAC 979 30 100.0 36 .............................. CCGGAAGTGTATTGGCTACTGCCTAGGTTGGCCCAA 1045 30 100.0 37 .............................. ACTGCGGCGATCTGGTTTAGTGCTTCTTCGATTTCAG 1112 30 100.0 36 .............................. ACCAACTCCTGGTGCTCTCTCTCTAAAAACACTGTA 1178 30 100.0 36 .............................. TGGTACCGGCCAGGTTCGTGGCGGAACCGCTAGGGG 1244 30 100.0 36 .............................. TATCCATCAACACCAATATTACTTTGGGCCAACCTG 1310 30 100.0 35 .............................. GGGGCCTTGGACGGCTGGAAAGGCGACGTGAAAAT 1375 30 100.0 35 .............................. ATTTCCTCCAGGGCCTGGATCCGGGCATAGGCGCC 1440 30 100.0 36 .............................. GGAGTAAGTGAGAGGACAATAATGCGGCGACTGAAG 1506 30 100.0 35 .............................. TCATTGAGGCCCTGGCCTTGTACGGCATCCGGGCC 1571 30 100.0 35 .............................. AAAATGGCAAAATCTACAATAATGACCTTCATCAC 1636 30 100.0 37 .............................. TGAACTCCTGCAATCGTTCAGCGTTAGCAAGCTTTTC 1703 30 100.0 37 .............................. CAGGGTCCGAAATATGCTGTATTCCGTAGATAATTGC 1770 30 100.0 38 .............................. GTTGATTTAAGACCCAGCTTGCACATTTCATTAACTTT 1838 30 100.0 37 .............................. CCCATACCCCCGAACAAAAAATCGAGGCCGCCATATC 1905 30 100.0 36 .............................. TGCTACGACGCCGGTTTTGCCGCCGGTGGTCGTGGT 1971 30 100.0 36 .............................. TGGCGAAAAAGGCCCGCATCTGGGCCTTGCTTTTAT 2037 30 100.0 36 .............................. TTACCGGAGCAACCCGGACGGCAACTTCTGGAACAA 2103 30 100.0 36 .............................. GAAAATAGGAGATGGTTTTATATGCGTCACTTACCT 2169 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 26 30 100.0 36 ATTTGCAGACTACCTATGAGGGATTGAAAC # Left flank : ATGGTAATGCCAAAAGATGTTAAGTCTTAGCTATTTCCTTATATCCCCATACAAACTTAAATATTCCACGCTTAAAAATTTCTCATCTCGTGTCTTGACAATGGGGTCCACCTTAGGAGGGCTGCCGGCCGGTTGCCGCGCTGCTCAAGGGGTGTAACCGCAATGCGCCGACTGGGCATGGAACGGCTAGCGAGGTTGCCAACGGAAGTGTCCTCGGCCATGAGGACCGACGCTTATCCTTGCCTAGCGGTTGCTAAACTTCCAATGCTCCGTATTTTCTCTCAAACGCGCTCTTCAAAAGCAGGAAAATTGTTGTCGACCTCGAATAATGTAACAAGCCCTGGAGATCGACAACACTATCTTGTGACGAATGTAGACAGGCTAGAGCCTCGAAACACAAGAGTTTGAACCCTCTAGCCAAGCGCAGCGGGCACCACTTGACAAGTGTAGAGACATAGACTGTCAAAAATATAAACCTAGCAATCGTGCGCCTAAAATGG # Right flank : TAGCTTCGTATGCATCTTGATCAACCTTATGATGTTATTTGCAGACACTAGCGTTGCATAAAAATCTTTAACCCATTGCAAGGCAATATATGGTAGTTGATTAAATGTAATATAACAACAATAATGGTGTATACAACCATGTTCTTTCCCCTTCTCTGGTTAAAGGACTTAGGGTATCAGGGGTAGTCCTTATCCACATATTGCCATATTAAGCTGCTTAAAGAACTAAGGGGTCATAGGTTACGTCATTAAGATAATCAGCTTCGCCAGCCAGTACTTGCCT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGCAGACTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 1 452-289 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVXL01000068.1 Moorella stamsii strain DSM 26217 MOST_contig000068, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 451 30 100.0 36 .............................. TAGCTAATTCGGCCCCGCCCCCAGGTGTTGGCTCAT 385 30 100.0 37 .............................. AATACTGCCTCAACCTCATGGTCGAGGCCGGGGATGG 318 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 3 30 100.0 37 ATTTGCAGACTACCTATGAGGGATTGAAAC # Left flank : ATTGCCAAAAATAGTCGTTAGAAACCGGAGAGAATAGTTGATGAAATGTGGATAATGTGGTATCCTTGCCTTGCATTTTGGCCTCCTTATGTTAGAGGTTAGGGCAAGGACTACCCTTAATCTCTAGCATAAGGAGTTTTTTCTTGCAAGGCCAGGTTATTTCAGGAATTTGGCTGATTTTGGGGCGCAATTGCTCTTGACATGTTTATAATTTTTTTATGCAACGCTAGT # Right flank : CGAAATGTGAGTAGCGTAGCTTACAAAAACTATGTTGATTTGCAGACTACCTGATATGGAAGGGCCTTGTCAAGCCCCTCCGAAATTTTTTTGCGAAACCTGTTTTAGGGACAGAAATATCCCTCTACTGCTCAAGGCAGCAATCAAAGTTGGACGTCTACAGATTTTAACTCTTTCCGCCCGGCTCTGGCAGCCCCATCCTGGGCGGGGAGCAAGCCTGTCAAGGGCCGCGTAGCGGGCCGCAGGCTTTACCCTTGACTGGCGCAGCGACCCGCCCTATAATGCAAAA # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGCAGACTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA // Array 1 1371-1007 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVXL01000073.1 Moorella stamsii strain DSM 26217 MOST_contig000073, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1370 30 100.0 38 .............................. AATACGCTACGGCCAGTAGAGATATAGGCCTCCTCTGG 1302 30 100.0 36 .............................. AAGAAACATGGGTGAGTTTGATATTCCTTATTGTCA 1236 30 100.0 37 .............................. TGCAGTTTGGCAGGTGATACAAATTGCCTAAATATGC 1169 30 100.0 37 .............................. TATTATACGGATGAAAGGGCTTTAAAGTTGGACAATC 1102 30 100.0 36 .............................. ACAGCTTATATGGTAAATTCGGCCAGAAGGCAGGAG 1036 30 83.3 0 .........................TGTTG | ========== ====== ====== ====== ============================== ====================================== ================== 6 30 97.2 37 GTTCGCAGCCTACCTATGAGGAATTGAAAC # Left flank : CCAGCCCTACATATGTGGTATAATTCATCTTGCCAGCCTCCTTAGCTTGTAGCTCTGTATTGGTCTCTATTGTACCAATATAACCTACGTATCGCTACTGTGGGGCTGGCCCTTCCATTATGTCTATTTCTTAACT # Right flank : ATTGTCAATAGAATTGACCCACTATGTGCAAATAAAATTGACCCACTGGGGAACAAAAATAATAAGCTTCAAGTCATGCGCCAAAGGGAAAGAGATGTAGCTCAGTTGCCGAATTAACGGTCGTTGGCTGCTTTCAGTTTACCTTTGAGCCGGTAACTAGTGCCGTTAATATAGAAAATGCGGGCGTGGTGCACAAGCCGGTCAATTATGGCCGCGGCCACCACCTGGTCGGAAAATATCTCCCCCCATTCGTTAAAGTTATAGTTGCTGGTCAGGATAATACTCCCCTTCTCATAGCGCATGGAGACCAGGCGGAAGAGGAGGTTGGCCTGTTCTTTGCTTACAGGCATGTAGCCGAGCTCGTCGATGATTAAAAGGTTGAGGCGCGAGTAACCCAGCAGCTTGTCGAGGAGGCTGCCGTCTTTGGCGCTCAAAAGTAGTTCTTCCAAGAGCTTCTGGGCCGTGATAAATGCTACGCGATATTTGGCCATGCAGGCCTT # Questionable array : NO Score: 9.12 # Score Detail : 1:0, 2:3, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCAGCCTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //