Array 1 76869-78289 **** Predicted by CRISPRDetect 2.4 *** >NZ_NAWW01000006.1 Streptococcus agalactiae strain NNB003 104, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 76869 36 100.0 30 .................................... TAGGCTTTTTAGAAGATAAAGCCAATTGTA 76935 36 100.0 30 .................................... TATGTTCTGAATTGCATTTCTCGACACGCT 77001 36 100.0 30 .................................... ACCATCAAGACGCTTATTTGCAGATTGTTA 77067 36 100.0 30 .................................... TGACATTTTAGGCAAATGGACAGTTGCTGA 77133 36 100.0 30 .................................... AGTAGATTATTTGAATTTCTGCCAGTGAAA 77199 36 100.0 30 .................................... ACCTGCGTTCAGTTTTACCGTAACCAGAGC 77265 36 100.0 30 .................................... ATCAATAAATCAATAGCAAGCCACACTGTT 77331 36 100.0 30 .................................... CACATCAGTTGCAACTAAAATTATTGATAA 77397 36 100.0 30 .................................... TGCACCTTCTTTTGTTTTGGTATCCATGCC 77463 36 100.0 30 .................................... TAACAACGCTTATATTAAAACCGATAACAA 77529 36 100.0 30 .................................... ATTTAATCTAAAACAACTACGAGAGAAAAA 77595 36 100.0 30 .................................... CTTTCCATCCATACGAACCCCAGTTATAGT 77661 36 100.0 30 .................................... TAAAAAATACCAACTATCAAAAGTGATAGT 77727 36 100.0 30 .................................... CGTAGTAGTTATTCCAATTCTCTATATGTA 77793 36 100.0 30 .................................... AAACCACTTGATGCTGTATCTCTCATAAAA 77859 36 100.0 30 .................................... ATTGTGATACAGATAGTTTATACCTAAAAA 77925 36 100.0 30 .................................... TGGTTTAATACTGTAAATTGTTCAATATCA 77991 36 100.0 29 .................................... CCCTCAATTTATTGACATTATTAATATAA 78056 36 100.0 30 .................................... TTATTCTCAACAGTAGCTAAAGTTGCTTTT 78122 36 100.0 30 .................................... AAAAAGAGCCAGAAACTCAATCAGAAGAAA 78188 36 100.0 30 .................................... TGGTGTTGGCTGTTCTGGGATGACTACGTT 78254 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CTTTAATATCGTCTATATAGATTCCTGGACGGTTTTAGAGCTGCGCGGTTATTATGCTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTAGCAAGCTAACGAAATCATCCCAGTTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATATAGAGTTGTGTCTATTAGTAGAAAATTCGAATTATTTTTCGGATTCAAAGAGAATGTGTCGATAGAAGAGATATGAAAGACTATAATTCCAACCTTATTGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTTGCAAGCTTACAAGGAAAGTAGTGGAGAACCTATCCATAATCAACTAACAGCTATGATGGATCTCACCTATTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //