Array 1 265405-264088 **** Predicted by CRISPRDetect 2.4 *** >NZ_WDOG01000004.1 Bifidobacterium bifidum strain BIOML-A4 scaffold4_size519674, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 265404 36 100.0 28 .................................... GTGCCGGGCACCTCGCGGTGCAGCACGA 265340 36 100.0 28 .................................... ACAAACACATTCGTTCGCCCTTGCGGTT 265276 36 100.0 28 .................................... CAATAGGCGACCGTACGGACGCAATCAG 265212 36 100.0 28 .................................... AAGGTGTTCGAGCAGCATTACGTCTATA 265148 36 100.0 28 .................................... GTTTCATAACGGTAATCGGCGCGTTTTT 265084 36 100.0 28 .................................... AGATAAAGCGCCTACACGGGATGTCCAC 265020 36 100.0 29 .................................... CAACGTTAGCACATGGCTACGAAGTACGA 264955 36 100.0 28 .................................... CTTTGCGGCTGGCTTCCATGCTGCATTT 264891 36 100.0 28 .................................... TTGTGTGGTGTATTTGTATTTGTATGTC 264827 36 100.0 28 .................................... CCATTTCACCGCCTGATATTTGCTTGAT 264763 36 100.0 28 .................................... TTAACGATGTTGTGAGCATGATCGGTAG 264699 36 100.0 28 .................................... TCATCCATGCGACACCGTTGACCATGAC 264635 36 100.0 28 .................................... AATAGTGATATCTTGTCTGGCAGTCCGA 264571 36 100.0 28 .................................... CCAAGGACGCGACGTTATCCACGACAAC 264507 36 100.0 28 .................................... TCAACTCGGTCAACCATTATCTGCATGT 264443 36 100.0 28 .................................... ACCGCTTCGACATCACCGTCAACGGCAC 264379 36 100.0 28 .................................... TCGGCAACCAGTGGGCGCTGACCCTGAA 264315 36 100.0 28 .................................... ATGGACTGACTATATCAATACAACCACG 264251 36 100.0 28 .................................... TTCCTGCGACGGCGCTGGCGCGTCGTCT 264187 36 100.0 28 .................................... CCGTTTGGAAACCCTCGTGTGCGAAACT 264123 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================= ================== 21 36 100.0 28 CAAGTTTATCAAGAAGGGTAGAAGCTAATTCCCAGT # Left flank : AGTTTAATTCATCCGGTTTGACGATACCAAGTTCGGTAAGCGATTTCGCGCAACAGTTTGGTCTGTACTGTGAGAAGAGGATCGATTCATTGGTGGTACCGGAATATCAGGGTCCTTATGAAAAAAGATGAGGACAGTGGTGGCATGTGGTGCTTGGTGATGTTCGATTTACCGGTGAAAACGAAATCGCAACGCCGTGAGGCAACGAAGTTTAGGAACATGCTTTTGGATATGGGCTATAGCATGGTGCAGTATTCCGTATACGTAAGATACACACCGACTCAGGCAGGCAACAGATCGACAGTAATCGCGATAAAGGAGAATCTTCCAGCTGAAGGCATCATACGGGTCCTCCATATCGGTGACCATCAATGGTCGACCTCATTGCGTTTTTCCAGCTCGAAACGGGTCACAGTCGATGAGACGCCGGATTATTTTACGCTTTTTTGAATAGAAGAAATCTAATAAAAGGCGGAAAATAGCCCTTCTTGATAAGAATA # Right flank : TTATTTATCGTGGTTGGCAGCATCTCTCGGTAGTGCCCGAAAGGTTGCGCACTTTGGATCATGCCCGCCCATGGCGCGATGACCGGTTCGCTTCCTGCAGATTGTCACCGAGCCGGGACATGTCGAGGTAACGCCGGTTGGACCATTCGTTCGCGGTGACGTACCTGATGCGCGCACAGACGAGCATGAGCGCGCCGTTCCCGTCCGGGAAGCTTCCCACGACGCGAGTGCGCCGCCTGATCTCGCGTTTGAGCCGTTCGATCATGTTGTTCTATTCTTCCCGCCTATCTTTTTCTTGTGGGGGCGTTGGAAAACCGCCGTTTTCGCGGGCCGGTCGCGCTGGTGGTCTGACTTGTGGTGCAACTATGGCGCGACTCGGGCCGCGATATGGTTCGGGAAGGTTTTCGCTTCGCGCAACCTCGTCGCGGGTGGAGGGTGATGGGCTGGCGGGGACGGGCGCAGCGCCCATGGTGTCGTTCCCCGTGTGTGCTCCGCGCAGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGTTTATCAAGAAGGGTAGAAGCTAATTCCCAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA //