Array 1 442-799 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPZX01000036.1 Clostridium botulinum strain H20 Cbot_66_contig_52, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 442 30 100.0 35 .............................. AGTTTTCTCTTATAATCTCTCCAAAAACTACTGAA 507 30 100.0 36 .............................. AAGAGTAAGGTCTACATCTAAAGGAATTGATAATTT 573 30 100.0 36 .............................. GTAGCAGATGCCGTATCAACAAAACCAACTAAAATT 639 30 100.0 35 .............................. TTTTGTTTTACTGCTTCTATACATATTTTTTCTGT 704 30 93.3 36 .T..............G............. TATACTCCATAATCAGCACCATTATAAGTTTGTCTT 770 30 93.3 0 .T...........................A | ========== ====== ====== ====== ============================== ==================================== ================== 6 30 97.8 36 GATTAACCTTAACATGAGATGTATTTAAAT # Left flank : ACCAAAATATTGTCCAAAGTAGAAATGTGAGTTTTTACTTTGGATTTTTTTTATTTTAGAAGAATAAAATAAAATACAATATTGATTAGATATTTTAGATAATAAAACAATAGCAATAAAAATGGGATTAACAGAAGAAATAGATGCTCTTAGAAAAAAGAAGGTAATTAGTATTTTTTAGAAACACTTAGAATTTAATTATCTTAGTTTTTTTCTGTACAATTCTATTAAAGTGTATAATTTAACTAGAATAGTAAATATTCTATTTTACCAGCCATAAATTTATATAAAATCCCTTAATCCATTGAAATTACTGGGCTAAGGTTGCCATTGAAAATTTTTATTGAAATTTCACAAACGGTTGGTAAAGTTTCCTTGAAACCTTGAAGTTTCAATGCCTTAGTGGTATTATTGATTTAAGAGAATGGCTATTTTACTGTAG # Right flank : AATGGATGAAATATGATTATTTTCTATGCTTTTGGGGTACTTATCATAACTTTAAAATATAGTATTTTAGAATAAAAAGTGTATTTTTAGATCTTAATATTTATTAGGACTAAAAATGCACTTTTTTCACTTTTAACAAGTATTAATGCAAAATATGGTACAATATATATTAATTAGAAGAAGTTTAGGTGAGGTAATTAAATGAATTTTATAGAATTAACAGCAACGGTAATGTTAAAAAAAGATATATATTTTGCAGATGGCGGATATATAATAGGTAAAAATATAAATAAGCTTATGTTATTAGATGAGGAGTTAAAAGAACTTCACCCTAAAAAAGAATATAAACATTATGTTTTTAATAATTTTTATCCATTAGAAAAAGATAAGTTTTATAAGAAAGATAAATTATATGTTTTTAAAATTAGGGGATTAAAGCACGATTTTATGCAAAAAGTACATAATTGTTTACAAATATTAAATAGTGATGATTTTAAAGT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 10982-11601 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPZX01000036.1 Clostridium botulinum strain H20 Cbot_66_contig_52, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 10982 30 100.0 34 .............................. GGGAATTGTGATTGTACAAATTGTATTGCAACGT 11046 30 100.0 36 .............................. GCCAGTAATGGAAAGTCCTACATTGCTGGTAAAGTT 11112 30 100.0 35 .............................. CCAGGTTGTCTAAATATTTTAAGTTTTGGTGAAAT 11177 30 96.7 36 ...........G.................. ATGTGTAGTTCAGATGAATGTCAGAACTTTATTCAA 11243 30 100.0 36 .............................. ATACTTTATTTTAAATTTATTTAATTTGTTTTTATA 11309 30 100.0 36 .............................. TTCCTTCAACAATATATTTTAGCCTTAGAAATTCTT 11375 30 100.0 35 .............................. TAAGATTGCTTTATTATTTCAGCTTTTTCGGTTTC 11440 30 100.0 36 .............................. ACACCTCGAATTTCTTTTTCCCAATCTTCAATATTT 11506 30 100.0 36 .............................. TGATCTATTGCCTTAATATTTAATTTTGTTTTTACA 11572 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 10 30 99.7 36 GTTTAACCTTAACATGAGATGTATTTAAAT # Left flank : ATATTAATAAAAGTGCAGTATATTTTTATTTTAATAAGCGTAATATAAACAATCCTAAAATTAATAAAATGTTTAGATATGAAAAAAATGAAAATATTAATTTTGCTAAATCAAATTCTACTATATGTGGTAATTTACTAGATTTAATGAAGTATCAAGAAGATATTTTATGCTCAAGGGATTAGAAGATTTTATTATGACTATGCATAATATAAAAGAACTATTATTTGTTGAAAAGATTTGTAACATATTAAAAATAGAAAAACCTTAAACAATTAACAACTTATTTTACCAGCCTTAAATTTATATAAACTCCCTTAATCCATTGAAATTACAGGGCTAAGGTGACCTTTAAAAATTTTTATTAAAATTTGACAAACGGCTGGTAAAGTTTCCTTGAAACCTTAAAGTTTCCTTGAAACCTTAAAGTTTCCTTGAAACCTTGAAGTTTCAATGCCTTAATGGTATTATTGATTTTAGAGAATGGCTATTTTACTGTG # Right flank : TAGTTGTATATAACCATCTTGGAATGTTTGTAGTGATTTAACCTTAAAACATCCTTATAGCTATAACTTAGTTTTGTAGCTATAAGGATGTTTTTTTACTCTTAATAATGTAACAAAATATGTTATACTTGAAAAAAACAAATTGTAATTTGCATGGGAGAATACAAAAATGAGCAAATTGACTAAATATATTGAAGATTTAAGAAAAAAGTATGGGGATGCAATAGTAACAAAAGAAAGTCATTATGATGATATGATGCTTTTAAAGGTACCTGAGCCATTGAGGGAATTTTATAGGGAATATGAAAGTTTAGAAATGCCTTTTGGAATTATTGACTCTATCGAAATCAGTATAAGATCTTCAGACGCAGAACCCTTTAAAAGTGAAAGCTGGTTTTCATTTGGTACAGATAGATATTTTTCCTTCTGGCTATGTGCTTATAAGGGAGATAATTATGGTAATTCTATTACTTCATGGGATCACGATATAGATGATGAAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 3 14367-15118 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPZX01000036.1 Clostridium botulinum strain H20 Cbot_66_contig_52, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 14367 30 100.0 36 .............................. CTAGTTGCTAATGTATCTAATTTATTAAGCATCTTT 14433 30 100.0 34 .............................. TATTTTTAGTAAAAAGGGCTTTTTTATTTTCTTC 14497 30 100.0 34 .............................. TTTAGTGGGGTAGGACAAGGTGTATTTCCTTCAG 14561 30 100.0 36 .............................. GCAATACTAAATATATCTATATGCTTTATGTTTGTA 14627 30 100.0 37 .............................. CATTAGCCCAAAGACGTGCCAGTGAATTGACTGGTGC 14694 30 100.0 36 .............................. TAATAAATTTATTTAGCTTATAGCTTATAATTAATT 14760 30 100.0 36 .............................. GAAAACTTTGATGTAAAACCATTAGAAATAGAGGAA 14826 30 100.0 36 .............................. GAGTAGGAGAATTAAGAGAGATAAGAATATCAGATA 14892 30 100.0 36 .............................. TAAATTAGGAATTAAAGAACTTGACTACCATAGTTT 14958 30 100.0 36 .............................. CACTATTATCTTCTAAAAACATTATTCTCTTTACAT 15024 30 100.0 35 .............................. AGTGAAGTTACTAACATACCTGGATTTGCTTTAAA 15089 30 90.0 0 ...............A........G.T... | ========== ====== ====== ====== ============================== ===================================== ================== 12 30 99.2 36 GTTTAACCTTAACATGAGATGTATTTAAAT # Left flank : ATGGGGGGAGTATTAAATAAGCGAGCTCATACAAGCAATGACTTGGGGTATCTTAAAATGGTCTGCCCAAGCTATGATGGAGAAAAGTATTATAAGCAGGAATGTGTAGTAACTGATGGAAGTTTGATTACTGCTTCTGGAATAGCTCCCCTTGAATTTGCTTTCCATATATTAAAAATTCTAGATGTATTCTTACCGCAAACCCTAGATTCCTGGTACAATCTTTATAAAACCCAAGAGTCAAAATATTTCTTTGAGTTGATGAACTCAATTCAATAAAATGGCTTAAAGTGGGTAAGATAGCTATAATATTAAGTATTCTATTTTACCAGCCATAAATTTATATAAAATCCCTTAATCCATTGAAATTACAGGGCTTCAGTGATTTTTAATAAGGTTTCTAAAAATTTTACAAACAGCTGGGAAAGTTTCCTTGAAACCTTGAAGTTTCAATGTCTTAGTGGTATTATTGATTTTAGAGAATGGCTATTTTACTGTGG # Right flank : TCCCTATAATTTAAAAAATCATTTATAAAGTCATAATAATAATATATAATATATATAAGGAAATAATACAAATGCTAGTGATAAATAAGAAAGGCGTGAAATAGCTTGATTAAAAAGCATGATTTTGATGCAGCATGGAAATCAATATTAGAAGCCTTTGAAATAGAAATAGTAGAGCTACTTTTTCCGGAAATATTTGATAATATTGCATGGCAACTTGGAACCAAAAGTCTAGATCAAGAACTACAAGAAATTCAAAAGGATATTTTTGATAAAGATAGTGCAGAAAAGATAATATCAGATAAGATAATAAAGGTTAGATTAAAAGATAAAGGAAGTAAAATATTATTTATTCATGTAGAAGTACAGAGCTATAGTAGCGATGAAGCTGTATTTGGCGAAAGAATGTTTAGATATTTTTATAGAATTTGGGATAAATTCAGATATAAATACAAAGATAAATCAGAAATAGTTGCTGCGGCAATATACACTTACAAGGG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 4 16435-17118 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPZX01000036.1 Clostridium botulinum strain H20 Cbot_66_contig_52, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 16435 30 100.0 35 .............................. GCTAAATCTGGATTTTTAACAGATAATGCATGTAC 16500 30 100.0 36 .............................. AATTCAATTACCCATACCCATGGATTAGCATTAAAT 16566 30 100.0 35 .............................. CACTATTGTATTCTTACATTCAGCAATATTAATGC 16631 30 100.0 34 .............................. ACCTTTCCTGCGATATATGTTTTACCGTTACTGG 16695 30 100.0 35 .............................. AAGTTTGATAATTATTATTTTAGTGTGAGTGGAGG 16760 30 100.0 36 .............................. TATACAGTATATAGAGCTTCTAAATCTCCTATTATA 16826 30 100.0 36 .............................. GTTAATGATCCACGCTTAATGGATGGCACTTCTTCC 16892 30 100.0 35 .............................. TCAAATTCATTATTAAGATAATCTTTTCTTAATTC 16957 30 100.0 36 .............................. ATAATTCAGCAAAGTAATGATAATGTCGATATTAAA 17023 30 100.0 35 .............................. AGAGCAATTCCTAAATGTTTAGGTCTTAGTATACT 17088 30 86.7 0 .C...............T.....G.....G | G [17115] ========== ====== ====== ====== ============================== ==================================== ================== 11 30 98.8 35 GTTTAACCTTAACATGAGATGTATTTAAAT # Left flank : AGAAATATGATGATTATAAAAAGAAAAGAGGAGGGGCATTGAAAATGACTGTTGATGAAATAAGAAGAAGACATTATACACAAAAAGGTAAAGAAGAAGGCAGAGAAGAAGGTATTAAACAGGGAAAATTAGAAATAGCAAAAAATTTACTAGATATTTTAGATAATAAAACAATAGCAATAAAAACTGGATTAACAGAAGAAGAAATAGATGCTCTTAGAAAAAAAGAAAGTAATTAGTGTTTTTAGAAACATTTAAGATTTAGTTATCTTAGGTGTTTTTTCTGTGAAATTCTACAATTTAACTAGAATAGTAAATATTCTATTTTACCAGCCATAAATTTATATAAAACACCTTAATCCATTGAAATTACAGAGCTAAGGTGACCTTTAAAAATTTTTATTAAAATTTGACAAACGGCTGGGAAAGTTTCCTTCAAACCTTGAAGTTTCAATGCCTTAGTGGTATTATTGATTTTAGAGAATGAGGATTTTACTATG # Right flank : GAAAAGGGCATGCTAATAAATATTAAAATGTATTATTGAAATTGTTTATATATAATGGGGGAAAAAAATGACTGAAATGCAAATGTGGAATGAATATATTAAAATTAATACTAATGCAAAAGAGTATCAATCATGGTCATTTGGTGGAAATACACCTAAAATGCCAAATTTGTTGGCTGAATTAGTATTAAAGGGGATTAAAACTGCAACTGCTAGTGCATATCCTTGTTATATTGCAGAAAATGCTCCATTACCACCAGTTGGAGGATATAATTTGATATTAAATACAAAAGGTGAGGCTATTTGTATCATAGAAACTACAAAAGTATATACAATACCATTTAACCAAGTTAAGGAGGATCATGCGTATAAAGAAGGTGAATTTGATCGTACACTTATATCTTGGAGAAAATGTCATTCTAAATTTTTTTCTATGGAATTAAAAGAGATTGGTCAAGAATTTACAGAAGATATGCTTGTGGTTTGTGAAGAATTTAAGG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //