Array 1 207913-209969 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMNM01000003.1 Vulcanisaeta souniana JCM 11219 sequence03, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ================================================ ================== 207913 25 100.0 40 ......................... TTACCCCTCATTACCATAGCATCGTAGAACGCTTGCTTAA 207978 25 100.0 48 ......................... CCTCTAGCAATGTACTTATTCCAATTCTTTTTAGCGGACAGATATAGT 208051 25 100.0 45 ......................... TGGGATGGTGAACCAAGTTACATAAGGGCATTGAAGGGATTGTAT 208121 25 100.0 42 ......................... AAGACTGCTGGGTAGCAATACGACGTGTATGTGCTGAAGTAC 208188 25 100.0 40 ......................... ATTGGCGTGGAGGTTAGGAACACGGACATTGTGCTGCCCA 208253 25 100.0 44 ......................... ATAGTTCATTCAACATTTCAATTAATTTGTCGTCACGGTAGTGC 208322 25 100.0 44 ......................... ATAATTCATAAAGCATATCCATCAGCTTATCATCTCCATAACGC 208391 25 100.0 44 ......................... GGGATATGTCGCCCAATGGCGTTAGTTCATTGACGTCTCCTCTT 208460 25 100.0 47 ......................... TTAGTCACGGATAATTTCTGCGTCGCGTAACGCAGCGTGATTAATAA 208532 25 100.0 41 ......................... ACCCTATGTACGCCAATTCCTTAAGCGGGATTGTAATCCCA 208598 25 100.0 39 ......................... AATGGTGATGTGACGTATTACGTGGATTACACGGGTTCA 208662 25 100.0 43 ......................... TCTTTCCAATCCTAATAACGAGACTCGTTATTTTGTTCATTAA 208730 25 100.0 42 ......................... GTTGAAGTGATCATTCATGGTGGTTGTGGATTGCTGTGGCTT 208797 25 100.0 46 ......................... TGGTTGAGGACAGTGATGGGGAGAGAGCCGTGGGGTTCGTATTCAA 208868 25 100.0 39 ......................... TTGCGTTCGCCGTGATTTTTTCTTTAATGGCGTTGAGGT 208932 25 100.0 41 ......................... TAATAATCATTGCGACTTTACCCTCAAGGTTACCAACCCTG 208998 25 100.0 41 ......................... TAAGTGCGAGTCTGCCTATCCGTACTTCCACGTTTCCGCGT 209064 25 100.0 40 ......................... TTCTGATCACCACCTTATCAATCCAGTAGGTAATTCTTAC 209129 25 100.0 46 ......................... ACACACTACCCAAGAAAGAGCTCTACAGACTCTACGCCAGTCACAG 209200 25 100.0 41 ......................... AACTCCCTGCCCTCAACCACGGCGTAGACAAGCAATGCGAA 209266 25 100.0 46 ......................... GAATACGTACGGTGTCACGTAGATGATGTAGACGATGCCATTCCCA 209337 25 100.0 41 ......................... AAGCCCAAGGTGAAGCATTGATAGGACCGACCTACGAGTCT 209403 25 100.0 47 ......................... TCGCTGAAAACCTTCTTTGGCTTACCAACCCACTGAGGCATTACCAA 209475 25 100.0 38 ......................... TTCCCTATTCAGCTCACGTTTTCTTTCGTAATTAATGA 209538 25 100.0 43 ......................... TGTGTTGGAGGTGATTGAGTTGAAGACGCTCTTCAGTGAGCTT 209606 25 100.0 41 ......................... ATGAGTGATTGCACATTAGCTACTGATACAATACCCTCTTC 209672 25 100.0 47 ......................... AAGATCATTGCCGTCATAACGCTTACTAGGGATAATAAGCATCCAAT 209744 25 100.0 40 ......................... GTGGGAGTTTGCCCTCTATAATGAATGTTTTGTATTTTGT 209809 25 100.0 44 ......................... ATAAATCTCCGTGAGCAAACCCACATTCACCAGAAACGCAATAA 209878 25 100.0 41 ......................... TCATAATCAACGCGGAGTTCAGCGGATCGGCAGCGGCTCAA 209944 25 100.0 0 ......................... | G [209966] ========== ====== ====== ====== ========================= ================================================ ================== 31 25 100.0 43 GATATTCTCTAAAGAGAATAGAAGG # Left flank : GGACATATTGAACGAGTACAATAAGGACTGTAAGAAGGTGAGTGGTTGCATGTCCATGGCCAAGATACAGAGAATACTCGTGAAGCTCGTTAGGAAGAGACTGATTAAGTATGAGAAAAGGGGTAAAGCGCACCACTATGAATTAACGCCGTTGGGCATGATGCTCGTGGGTATAGTAAAACCCAGCAAGGCAGTTCATGAGACTTAGGTCTAAACACGTAATGCATGGTCGTTGGAAGATCCATGTTATTTAGAAACTGAACATAACAACCAAATCAAATAATCAAGAAATGGAAAATCATGAATAACATGAAATCAATGTTCATAGGAACAGGTACATTAATGAGTAACTGAATGTAAACAAAGGAACAATAACGAAACCACCAAATAAACCATAGGAATAAGAACGCATCATAAATGTTCGTGAGCATAAACGTTCCAATAATTAACTTACCCGTATGAAGAAAGATTTATAAACAACCTTATAATTATACGTATCG # Right flank : GATATTTTTATGATTAGGGCGGGCATATATCCTTGAAGTAGCAGGCTTTGCATTTTGCCTTGTTTGTGGTTTTTGGTGGTGGTTCTTGGTTTTGTATGTGTTTTCTCATGTCCTGTATCGTTCTTTCTGTCCATTTTCTTAGGTTTGGAGTTGGTCTTATTGTTATTGTTGTTTCTTTTTCTTGGTTTATGATTATTATTTTATCCACGGTAACCTTCATTGTTTCCTCAAGGGCCATTGCATATGCTGTTGCCTGTGCCAGTACGTGGCTATACCTTGTATATAGTTTCTTTTTATTCCCTATATTCAATTTTGCCTCTATTATTACTGCCCTGTTTTTATTCACTACCACGGCATCTACCCTGCCCACTATGCCGAGTTTTGCTGATTTCACGGGCACCTCTAGACTTACCTCTCCCTCTATTCCCTGTTCTCTTATGGACTTTATTACATTCTCCGTATTTGATACCTGCTTCGCATACTTCATGGACTCGGTTGGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATATTCTCTAAAGAGAATAGAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.60,-2.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 1 2938-2644 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMNM01000012.1 Vulcanisaeta souniana JCM 11219 sequence12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ============================================ ================== 2937 25 100.0 41 ......................... TATGGGTGGGGCTTGCCATATCTATTCCCCATACTGAGCAA 2871 25 100.0 42 ......................... CCTGGGTATATTTGCGTTATTTCTCAGCGATTTTAGTATATT 2804 25 100.0 42 ......................... AACATCGTACTGCCCAGCACCAGCATAATCAACTCGATAACA 2737 25 100.0 44 ......................... GTTTTTACAATCAGTGTATCGGCAATTGCGTTTATGACTTTTGT 2668 25 88.0 0 .....................GGG. | ========== ====== ====== ====== ========================= ============================================ ================== 5 25 97.6 42 GAAGATTTCAATAGAATATTGAAAG # Left flank : TTAACGGATATAAATATCGCTGACACAATTGGGAAATCCGTGACCAGGAACAATATTGCCCTTGGCAGTAATAGCTCCATTGAGATCAAAACACCTAGAATCCCTACCCATGACCTTCAGTGAACCAAGTGATGGGAATCGGACTTACTCACGAAACTCCACTGCATTATTGGTTGAGGAGGACCATCAGCCTAAACGAATTGGTGAAGGGGTACTACGGGGAAATAACGTGAGTATGCAGTGGGTTTTTTGAAGTCCCCATGAGTTTACCGGTTGATTAATCAAGGCATAGCTAAATCACTGCAGCAACGGCGAGATAACCGTAGGAACAAGTACGTTGTTATGGAATTGAACAATACCGAGGAAACAAGTAATACTCACTTCGTAGAGACCGTTAGAACAAGCCCGAATCATTAACGTTCATGCGGAATAAAGATCCAACAACAACCAAGCAAAGGATAGGGTAAAACTTATAAAAGACCTAATAAAATGACGATCCA # Right flank : TGAGGGTTTTGGTGGTTAGGGCGTTGTTTGGGTGTAGTGGGTCTTCTATGGTTTGGTGTGTGGGTTTTGTTGCGTTAGGGGTATAAATCCTTAGATGCTGTGGTGGTTTGTGTCCCTGATCTTCGTGTTTAATTTTGGTGTCAGGTCTTCATCACCCATTGTGCTCAGTGGGTTTACTGGCTCGGTGACAATGTCCATACTCCTCAATGTATTAAACACTATCGAGCCTGGCCTCGGTGATGAGGTTCATGCGAGGAGGGGTCCTAAGCCTGTCTCGGTGACGCCGTTCATGCGTGGTGGTAGGGTTTTGTTTAGGGGTGTTTACGTGGCGCCGCCTGGTGAGGAGTTGAGGTTTAGGGTTACGGTTGTTGGGGAGTCCCTGGGCCTTAAGCTCCTCAATGGGTTTGACGGTGTTAGGAGTGTGGGGATTGGTGGTGTTGATGCATCGCTTGAGTTGTTGGGTGTTGAGGTTCTTAGGGTTGATGATCTTTGGAGGGTTG # Questionable array : NO Score: 8.94 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGATTTCAATAGAATATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //