Array 1 3728096-3730305 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP037953.1 Permianibacter aggregans strain HW001 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 3728096 36 100.0 30 .................................... GGCAATATTCGACGTGTTGCAGGTGTTCAA 3728162 36 100.0 30 .................................... AATGTCGAGGTGGAAGTCAACAGCCGCCGC 3728228 36 100.0 30 .................................... AACCGCCAGGTTTTCCCTCGATTTATTGCA 3728294 36 100.0 30 .................................... GCCACGTCGCCAGTGCTTTGGGCGTCATGC 3728360 36 100.0 30 .................................... ACGGCGTAACTGGCGCGCTATCGACAGTTA 3728426 36 100.0 29 .................................... AGCGAAGGCTTTACATAGGCGCTTTTTTT 3728491 36 100.0 30 .................................... GCATCGATGTTTTCGACGGTGTCATTCAGG 3728557 36 100.0 30 .................................... AATTGCGCCGCGTATTTCAGCGCGCCAGTG 3728623 36 100.0 30 .................................... GTTCGGCAGCGCGGTATTAATCCTGTCTCG 3728689 36 100.0 30 .................................... TCGGGATCACCGAAGAGGAACTGGTTCGGG 3728755 36 100.0 30 .................................... TTAGGGAATCTAGTGATTTTTGGCGAATCG 3728821 36 100.0 30 .................................... CATGCACTATTGACAACGACGGGCTGACGC 3728887 36 100.0 30 .................................... GCTTTTGAAGCGTACAGCCCACAATTAATT 3728953 36 100.0 30 .................................... AAGTCGTGCGACGTGCAACCGGTCCTAAAG 3729019 36 100.0 30 .................................... ACAGGCGGTAACATTTGGTCAAAACTTCGA 3729085 36 100.0 30 .................................... AGGTAGCGGTTTGACCGACAGCGACGTTCG 3729151 36 100.0 30 .................................... TAACAGCATCGCGCCAGCAACAACGGCGGC 3729217 36 100.0 30 .................................... AGTAGCCGGCGCCAAACAGCGCGTACAGTT 3729283 36 100.0 30 .................................... ACTATCGTTGATGGAATGCCCTCCCCGGCT 3729349 36 100.0 29 .................................... TCCAACAGCGGGTTTCTTTTTGTTCGCAG 3729414 36 100.0 30 .................................... GACAAGGGGATTGTGATGATAAAGCGACAC 3729480 36 100.0 30 .................................... TTTGGGCTCTTCAACAAGCGCAATGCTTCG 3729546 36 97.2 30 .............A...................... ATCACCAGCGATGAGGCGCTTCGTCGCCAA 3729612 36 97.2 30 ...........................A........ TTGAAACGTTGAGGCCAGCCTCGGCCAAAA 3729678 36 100.0 30 .................................... TACGTGTCGGTGATACCGGCATCGGTAAAT 3729744 36 100.0 30 .................................... ATTGCAATCGACGTATCACCGCTTGGTGTG 3729810 36 100.0 30 .................................... ATTTCGGCATCGCGCACAACAAAACGACGC 3729876 36 100.0 30 .................................... CGAGGAAAACCGCATGTCTTGATCGGCGTT 3729942 36 97.2 29 ...............................T.... ATCAAGCACTACACCAATGTTCAGAAAGG 3730007 36 100.0 30 .................................... TTCTACCGCGCGCAGGGTTGTGTTCGCGCT 3730073 36 100.0 30 .................................... CTTCGCGCTGATGGTGTTGCGCAAATCGTT 3730139 36 100.0 29 .................................... TACCTCCGCAAGTTGCCGGAAATCCGCAG 3730204 36 100.0 30 .................................... CAAACAATTAACGCGATTAATGTTGCAATA 3730270 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 34 36 99.8 30 AGTTTATCAGATCGGGATTTGTACTCTGGCCGGAAC # Left flank : AACTCGCCACATCCTTGGCGCAGGTTTATGTGGGAGAGCGTTTCGAGCTGGAACTACCTGAGCCGGGTGTGCTAGACGAGTTGTTAGATGACATAAATTGATGTGAGATATGTTGTCGGGATTTCGCATGACGTGGTTGGTTGTAATGTTTGACTTGCCGGTGCTGACCAAACCGGAGCGCAAAGCCGCAACCCAATTTCGGCTTATGCTGCTGGACTATGGTTTTGAAATGAGTCAGTTCAGCGTATACATGCGTTATTGTTACAGCTCCGCACAGGTCGAGACCCTTTGCAAACGTGTGGAAGAGGCTTTACCTGACGGTGGTCGGGTCAATATCCTTCAGTTCACGGACAAGCAATATGAGCGGATCATTTCCTTCCATGGCGCGGTTCGGCAACCGAAAAACCGCAATCCATCACAGTTCAATCTGTTCTGAATCATGATTTTTCTCTTGAGATTAATGAAAAAGCCCTTGCATAACAATAAGTTAAGCAAGGGGT # Right flank : CATTTAACAGATCACCGGTTATACGCTGCCAGTCCATCAGGCTGAGATTGTTGAGCGGTCAGTTGAGTTCCGTCTCAGTAACGGCAACGGCAACTCCCCCTCACACAACAACTGCTCATGAAACCTTTGCAAATCAAAACCAAGCTGTTGGCTGCATTCTCTACGCAAAGCGTGCATCTCCCGCTCCCCAAGCAGGTAGCCCAACGCTTGTCCCGGCCAGGTGATATAGCGGTCTACTTCGGTTTCGCTTTCGTGTTTGGATAATGACGAATGCTGATACAGATATTGCACAGCTTGTTCACGAGTCCAGCCTTTGGCGTGCAGGCCGGTGTCGATGACGAGGCGTGCGGCACGCCATAACCGATAGCTTAGCCAGCCGAGTTTGGCGTGTGGGTCATCGTATAGACCGATTTCATTGCCGAGTGATTCGGCGTATAGCGCCCAACCTTCCTCATAAGCCGTGTTCAATAAGCAGCGACGAAATGCCGGCAGGTTTTCTC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTTTATCAGATCGGGATTTGTACTCTGGCCGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.70,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //