Array 1 237912-239409 **** Predicted by CRISPRDetect 2.4 *** >NZ_PGFB01000001.1 Compostimonas suwonensis strain DSM 25625 Ga0181017_101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 237912 29 100.0 32 ............................. AACAGCAGCACGGCGGTGAGGTTCGTGAGAGC 237973 29 100.0 32 ............................. TCCACTGATTCCCTGCCACGAGCACGCGCCCG 238034 29 100.0 32 ............................. GGCACGAATATGTCGATCGAGAGGTCTTGCGT 238095 29 100.0 32 ............................. TTCGCGGCCTCGATCGTCAAGCTGATCACCGT 238156 29 100.0 32 ............................. GCGGGAGCGCCCTGTGAGCCCTTCTCCCGAGA 238217 29 96.6 32 ............................T CAGGTTCCTCTAAGACGTTGCTGTCCAGGTAT 238278 29 96.6 32 ............................C GGCCCTGCGTCGGAACTGCCTTGAGGTCGAGC 238339 29 100.0 33 ............................. CCCCGGAGTGACCGGGGCTTGAATGGTGTGCGG 238401 29 100.0 33 ............................. TGCATGAACACGGATTTGTACCCGTTTGGTAGC 238463 29 100.0 32 ............................. CCGCTAACCAAGGCGCAGATCGCAGACGGCGT 238524 29 100.0 32 ............................. ACGCGCCGGGTCATCAGTGTCGATCCGGGCTC 238585 29 100.0 32 ............................. CCAGAACTCGTGATCATGGGCAGCAGCTTGCG 238646 29 100.0 33 ............................. ACTCACAACAAACTGCCAGTGGCTGAATCTGGT 238708 29 100.0 32 ............................. CGATCGGCAACAAGCCGCCGTCGGTCTCGAAT 238769 29 100.0 33 ............................. AAGGGCGGGATGCTCGCCAACCTCAAGCCACAG 238831 29 100.0 32 ............................. ACTTACCACAAACTGTCAGTGGCTGAATCTGG 238892 29 100.0 32 ............................. GCAGGCGGCACCGTGAGTACGGCCGATCACAT 238953 29 100.0 32 ............................. TCGAGATCATCCACGGTCATTCGAGGTAGTCC 239014 29 100.0 32 ............................. TTGAAGACTTCATTGACTATCACGGAGTCACG 239075 29 100.0 32 ............................. GATGGCGACTACACGGAGATGGGCGCCGCGAT 239136 29 100.0 33 ............................. CCGACCGGGCGAGAAGAGCGAACCACGGTGCGA 239198 29 100.0 32 ............................. TCCTCCACAACACGATCCATGCGGATCGGACC 239259 29 100.0 32 ............................. CCGCAGGATAGCTCCCATAACGCGGTGTGGCG 239320 29 100.0 32 ............................. CTGCGGGTGCCGCGTGAATGAGTGGGCGTGGA 239381 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 25 29 99.7 32 GTGCTCCCCGCCTGCGCGGGGATGATCCG # Left flank : CATCCGGGCTTTCACGATCCAGGTCGACCCGACCGTCGACGGCATGAACACGGAGGCCTACGTCGAGCTCTTCTGCCGGGGAACCGTAGCGCCCGAAGAGCTGCTGCGCATCCTCTCGGCCGTGCCCGAAGTGGTGGATGCCGGCACCGTGACGGGCAGCGCCGACGCCATCGTGCACATGCGCTCCCGCGACATCCCCAGCCTCGAAGCCGCCCTCGAACGTGTGCGCATCGCCCCCAACGTCGACCACACCCGCTCGGCCATCGTGCTGTCGCGCCTCATCCACCGCTCGAACGACTGAGGCCTGGGCGGGCCGGCTGGCTGGTTGAGCGGTCTGAGCGGCCGTGGAACAGGACGGATGTCGCGGCACACCGCCATCGGGCGTCACTGCGGTGGCGTGGCGCGACATCCATCCTGTTTTCGAGACGCGGTTCCCCGGCGAATGCGACAAAGTGACTCGATTCCCGAGGTTCGGTGACATAAAGTCCTGATTAGCAAGT # Right flank : GTAGTCCTGTGCAGGCGTCGGGAAGCCTGCCTGATTACTCCCCGGCCTCGCCGGGGCACTAGGCCAAAAACAATTTTTCTTGCCCGTCACGGCAAGGTGATCTCGGGGAACACGTGCTCCTGGCTATTACCGGGACATGCAGGGAATACACAAACGGAAGGGCGAATTTCAGAGAGACCTGAAAGGGGGGTACCTGATTTTTAGCACAGTGCATACGCTTGCATCAGATCTGCGGTCGACGCGTCACGCCCACCACTCCAATTGCCGGAGCCGAACAACACATACTTTCCTCGGGCCCCGGCAGCAAAGCAAGACACAGATTCGGGGGGTAACGATCGTGGCGTTGAGCACAGTCGCTCGCACCCCCTGGGCGAAATCGAGCGAGGATGAGACATCCTGGCTCCCTCTGCACGTGCACATGGCGGACTCAGCGGCGGTCGCCGACATCCTGTGGGACGAGTGGATCCCACGTAGCGTACGAGAACTCCTCTCGCGCGATC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCCTGCGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGAGCGGGGATGATCCC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,1.15 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], // Array 2 251324-248973 **** Predicted by CRISPRDetect 2.4 *** >NZ_PGFB01000001.1 Compostimonas suwonensis strain DSM 25625 Ga0181017_101, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 251323 29 100.0 32 ............................. CTCGTCTACGAGAACGACGATGCCGAACTGCC 251262 29 100.0 33 ............................. CTGCGGTTCTGCAGTGCTTTCTGCATCTCCTCC 251200 29 100.0 32 ............................. TCGCCCGGCAGACCAAAGAAGCTGGACTGTTG 251139 29 100.0 33 ............................. GTTGTTGCCATCACGGAACGCATCAGCCGCAGC 251077 29 100.0 32 ............................. TTGGAGAACATCGACGAGATCAGCGTTCGTCG 251016 29 100.0 32 ............................. GTCGGCATGCTCTGCTGGTCGTGCTGGGAGAA 250955 29 100.0 32 ............................. CGAGGCAGCTGTGAAGGTTTGCTCCGAGCCAG 250894 29 100.0 32 ............................. GTGGCGTCATCATCGACCTGTCCGCGGTCGAC 250833 29 100.0 32 ............................. GCCATCGACACGCACGCGGCGAACTTCCGCGA 250772 29 100.0 32 ............................. GAGAAAGCTTCTACGACGACTAGTTGCAATGA 250711 29 100.0 33 ............................. GCGCGCTCCGCCGCATCCGGCCCGTTGTCCGGC 250649 29 100.0 32 ............................. ACGAGAAGTAGTGGGACGGGGGTCAGGTCAGG 250588 29 96.6 32 ............................T ACGACGGAACCCTGTCGGCGTTGATCGCCTTC 250527 29 100.0 33 ............................. CTGCACCGCCTAATCGAGGAAGCCAGGGTCAAC 250465 29 100.0 32 ............................. TTCGAGTTCGACATCGTTGAAGCCGAGGGGCT 250404 29 100.0 32 ............................. AAGGGGGCGATGTCCTCGGCCTTGTGGCCGGC 250343 29 100.0 32 ............................. AGCTGCTACGCCGCAGCAGGAGCCGACGATGA 250282 29 100.0 32 ............................. GCGAACGTGCGGCGGGCGATCAGACCGTCTCG 250221 29 96.6 32 ..........T.................. TAGAGTGCGCCGAAGAGTGATTCGGGTGTGCA 250160 29 100.0 32 ............................. TGCGGCCGCACTTACCGGTAGCGCTCGTGGGC 250099 29 100.0 32 ............................. GACGTCTCGATCCGCCCGATCACCAAGCAAGC 250038 29 100.0 32 ............................. CCCCTGCGCTGCGTCGAGTGCGGACGCGTCGA 249977 29 100.0 32 ............................. TTGTCGATCAGACCTATCGTTCTTGGATCAGA 249916 29 100.0 32 ............................. CTGGCAATCACAGAGAACGAACTGTCGAGATT 249855 29 100.0 33 ............................. GTCAGCACTGAGGCCGTCGACGAAAGTGTGCCA 249793 29 100.0 32 ............................. GTATGCGCCCCTCGTCGAGGGACCAGAGGACG 249732 29 100.0 32 ............................. ATTCCGGCTGGGCCGGTGAGCCCTGCCGTGAC 249671 29 100.0 32 ............................. AGCAACTACGCGTCGTTGTTGGATGGTAAAGG 249610 29 100.0 32 ............................. GCAAACGCACCCTAAACGCCCGCCTCACGCGG 249549 29 100.0 32 ............................. CTCGTTACATGCCACATCACGGTTTTCACGAT 249488 29 100.0 32 ............................. GTGACGGCTACGCCGTCTTGTTAGGGCCCTTG 249427 29 93.1 32 .C.T......................... TCGATCAGGATGCGGGGATCTGCCGGTCGGTC 249366 29 96.6 32 ...T......................... ATGCGCCGCCCGACGACGAACTGCGCGAGTTG 249305 29 96.6 32 ...T......................... TTTCTAGGGTTCTTACCCTCTTCCCACCCGCT 249244 29 96.6 32 ...T......................... TGAGAGGGAGAGAGAAGTGACTGTTCAGATTC 249183 28 93.1 32 ...T........-................ TTCTCGTAATTCGGATGGCTCCTCGGCGTCGC 249123 29 96.6 32 ...T......................... CATGCCCGAGGAGTGCCTGCGTGGCTCGAAGG 249062 29 93.1 32 ...T.......T................. GAGGTATTGCGAGAGGCTGCCGTCGGTGGTCC 249001 29 96.6 0 .........................C... | ========== ====== ====== ====== ============================= ================================= ================== 39 29 98.9 32 GTGCTCCCCGCCCACGCGGGGATGATCCG # Left flank : GCGGTTCGGATGACGAGCCCGGGTCGAGCGTGAGCCAGCCGAGCTCCGGTTCGCAGGGCGAGCTCGCGCAGACCGGCGTCACGCTGGCGACCCCGCTGACGCTGCTCGCCGCGCTGCTCGTGGCTGCGGGCGCCGTCTTCATCATGGTGCGCCGCCGTCGTACGGCCTCGGAGGACCCGACCGACTAGGCAGCTTCACCCCTCAGCGGCCAGGTGCCCACGACCCCTGTCGTGGGCACCTGGCCTTCGTCGTCGGTGAGCGAGTGACAACCCAGAGCCCCGGCGGGGTGAAGCCCGCCACGCAGGATGAGATGGGCGCCATGCCGTCGCGGCGGTACCTGAGTGCGGTGTGGCGCCCGTCCGGCCTGTTCCACGTGCCCGGTCGCGGTTGTCCTCGGCTCGATATTGCCTTTTGAGCTGCTGCGACGCAGGGTTGTGCAGCCTTGAGCGAAAGTGAATCTATTCGCTAGACCCACAAGCTAAACTTCCTGGTCAAGTAGT # Right flank : AACTGCAACTCTCAACGGTGTGGTGTGGTCGACGGGAGAGATTGAGCCGAGCTCGTCGAGCCTCCTCATGGCCAGGGTCTGATTCATCCGAGCGTCACGCTCAAGACTTTCGGCGCCGGGCTGCCATTCGATATTTGCTCGCGTTGCTCCAGCCGGGTCGAAGCGGGGGAGTCTTCTCGGTTTGGTCTTCGCTGGGTCGAAGCATGAGCTGGATGCCGTCGAAGTCGACGGGCTTCCAATCGTGTCGATGCACTTTGAAGGCGAGTTTCTGCTCGTTTCTCGCGGAGTAGATCATGATCGCGCGACCGTCTTTGGCCAACTCGACGACCCGTTCCCACATGAGGTCTCGTACACGTGCGCTTACATGGCCGACGAAAACGCCTGAGCTGATCTCCAGTAGCCATCGTGTGAGATGACCACGAAGGCCGGACGGGCATGCTGTGAGAACGAGAACTACCATTCGCCGTCTCCTATCGTCTCGAGTTCGGCGTACGACGTCC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCCCACGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //