Array 1 19196-19357 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI519465.1 Weizmannia coagulans CSIL1 I001DRAFT_scaffold00026.26, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 19196 30 100.0 36 .............................. TTGAAAAATATGCTGGCAGTTCAATCGCGAATTTGG 19262 30 100.0 36 .............................. TCGTGCTCATCTCCTACCGCTTCACCCGTTCCCTAC 19328 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== ==================================== ================== 3 30 98.9 36 GTTAGTATTTTACCTATGAGGAATTGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACC # Right flank : AACACTCAATATATCCAGTCGGAATTTAATTTCTATTCTGAAAATATGTGCCGACTTGATTTTCATTCACCCGCTGGTGTCGCGTTCACTGCGGCACGGGCTTCTAATTGAATAAGAAATAAGTCACTTTCACAGTCTATTCCGCTGAATCAAATTTAATTCTGAAATCACGAACACACCTGTCATGCGAAACAAATTTTGCAATCGTAAAACAGGAAAAATCATCTGAAAAATCGTAAACTATTACTCGAAGGGAGATGGAGCTATGGAAGACTATTTGATGTACTTGAATGGTGGATGGACGGGGGAAGGACTGCCAAAAATCAAAGTGGACAACCCTGCGTCCGGCGAAGTGATTGCGACGATTCCAAAAGGCGGGGAAAAGGAAGCTAAGCTCGCTGTTGACGCGGCGCATGCGGCTTTTCCGGCGTGGGCGGCGCTTTCTGCCTATGAACGAAGTGCCTACCTCCGCACGTGGTTTGAACTGATCCGTCAACATG # Questionable array : NO Score: 8.31 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGTATTTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [3.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 1 13264-13942 **** Predicted by CRISPRDetect 2.4 *** >NZ_AXVW01000068.1 Weizmannia coagulans CSIL1 I001DRAFT_scaffold00063.63_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ============================================================================================ ================== 13264 32 100.0 34 ................................ CGTTAGCATGCCGAGTGATTGCAGATAAGTCCTT 13330 32 100.0 34 ................................ CATACAGGATTATGCTTGCTGTCACATTTCATAA 13396 32 100.0 33 ................................ CCATATTTCTAAAACATTACAAATGCGTTATAA 13461 32 96.9 34 .............T.................. CTGCCGGGCTGGGAGTATAGATATCGTATCTATA 13527 32 100.0 33 ................................ TAGGAATTGATCAAATTTAAGATAATCTTTTTT 13592 32 96.9 33 ............A................... CGTGCTCGAGTGGAATTTATTTGTATTGGAAGG 13657 32 96.9 33 ............A................... ACAATACTTTGTCGCGCTTGACGCTACCTGCGC 13722 32 96.9 92 ..................T............. TTGTCCTGCCCCCGTTTGCCTTTGTCGGCTTGCAGTTACACTCCTTGTGGATTGAAATGGTACCTGATGAATGCACAAGATCCACAGATGCA 13846 32 93.8 33 ...........C.T.................. CTGAATCAAGTCATGCAGTTTTTTGGACACCGC 13911 32 93.8 0 ........T....T.................. | ========== ====== ====== ====== ================================ ============================================================================================ ================== 10 32 97.5 40 GTCACACTCCTTGCGAGTGTGTGGATTGAAAT # Left flank : TACAGGGCTTTACTTCAGTGTCACTCTTTGGTTTGGGTCAGACGCTTACCAGATACTTAAAACCTAACAGCGGAGAAGGTCCTTAGAATGATTATTAGTTTTAATAGGATATTCAACATCTGTCGAATTAGACGCCGATGCTGAAATTAATCGTAGTAGTACTGATGACTTTTTGCAGCAGGAAACAGAGTAACACGATTTAGTTCATTTTATATAGCAGAAAAACAAAAATTAACCAGTCCAATTTATCTCGTAAGAACGATTAGTTATAAAAGTGGTTTTTTAACGTGCTGCTTTTTACGACATAGCAGTCTATAATAAGAATGCTTTTTGATGTAACTGTGCGAATGAATAGTGTACATGAATTTCCCATGGGATTCGCACCAAAAATCCAATAGATTTTTCCATATAAAGGAATTTTCGTGTAGCAAAACTTGGGATAATATGGGGTAATTTGTAGATATTCGTCAAAATCTATTAAATTTCTACACGATAATAGC # Right flank : TAGGATTGAGATAAATATCATGGTATAATTAATGGTAAAGATTAAGTCGTACTCCGCCGACTGGAAGAGAAAGAAGGATACTGTATGAACACGATGCATCGTAAGTTGGGAACTTTTGCGCTTACCATGACCGGTCTTGGGTCCATCATCGGGTCCGGCTGGTTGTTTGGTGCCTGGAAAGCAGCTACGATTGCCGGCCCGGCAGCCATTTTTGCCTGGGTGATCGGAATGGTCGTTATCTTATTTATTGCCCTTTCTTACAGTGAACTGGGGGCCATGTTTCCGGTAGCGGGAGGAATGGTAAAATACACCCAATATTCCCATGGTTCTTTTGTCGGCTTTCTTGCTGCATGGGCGAATTGGATTGCCATTGTTTCCGTTATTCCGAGTGAGGCCATGGCTTCTGTTCAGTATATGAGCTCATGGCATTGGAGCTGGGCACAGAGTTTGGCACATAACGGAATGCTGACGCCAAAAGGACTCGGCCTTGCTTCTTTGCT # Questionable array : NO Score: 5.28 # Score Detail : 1:0, 2:0, 3:3, 4:0.88, 5:0, 6:0.25, 7:-0.54, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACTCCTTGCGAGTGTGTGGATTGAAAT # Alternate repeat : GTCACACTCCTTACGAGTGTGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.20,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 1 7-169 **** Predicted by CRISPRDetect 2.4 *** >NZ_AXVW01000098.1 Weizmannia coagulans CSIL1 I001DRAFT_scaffold00091.91_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 7 32 100.0 33 ................................ CTTTAGATGTGGACATTTCCCTTGGATGGGGGG 72 32 100.0 34 ................................ CATACATGCCCATTTTTTGCGTAAAATAGCCCCC 138 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ================================== ================== 3 32 100.0 34 GTCGCTCCCTACATGGGGGCGTGGATTGAAAT # Left flank : GAAGGCG # Right flank : TCGTTTGCTGTATTTGCGATCCCTAGGATCATCAAGTCGCTCCCTAATGAATACTTGCTGAGCAAACCAGACAAAGCCTTGTATCTGGTTCGCTCAGCCGCAAATCTGGTTGATGCCGCCTTCTTTGTTCCTTCCATCAACCTTAGACCCGAAAAGTGGCGCTGAACGCGCAGATACCAGTGACAAACCCTTTTTGTAAAGTAACTCTTGTTTTTATAGTCCCCGGAACCGGGTCCAGGGCTTTTGCTTATTCAGCAGCCCCCGATTATGTATTTCTGTCATCCGCATCGTCCAGTTCCCTGATTAAATTCCAGGTCTGGTAAATCCGGTTTGCCATTTTCTCAGGATCTTTCAGCATCATTTGATATAAATCCGGTTCATGGCTCAACGTCTCAAGCAGTTTCTTTTCCGGATTACTGACCGCTTCATTTGTCTTCAGGCCCACATGGTTGGTAAGGCCTAAAAGATAATCAATGGATACTTTTAACACTTGCGAAATC # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTACATGGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.00,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [3.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //